RNA–Protein interactions for RNA: ENST00000339497.7

CCNY-202, Transcript of cyclin Y, humanhuman

TSL 1 (best) BASIC

Gene CCNY, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-202ENST00000339497 NISCHQ9Y2I1 1504 aa28.48■■■□□ 2.15
CCNY-202ENST00000339497 DCAF8L2P0C7V8 631 aa28.38■■■□□ 2.13
CCNY-202ENST00000339497 SUPT5HO00267 1087 aaKnown RBP27.26■■□□□ 1.95
CCNY-202ENST00000339497 SHROOM4Q9ULL8 1493 aa27.04■■□□□ 1.92
CCNY-202ENST00000339497 EHMT2Q96KQ7 1210 aa26.1■■□□□ 1.77
CCNY-202ENST00000339497 FAM9AQ8IZU1 332 aaPredicted RBP25.62■■□□□ 1.69
CCNY-202ENST00000339497 PCGF6Q9BYE7 350 aa25.36■■□□□ 1.65
CCNY-202ENST00000339497 TTBK1Q5TCY1 1321 aaPredicted RBP25.18■■□□□ 1.62
CCNY-202ENST00000339497 TRIM41Q8WV44 630 aa25.18■■□□□ 1.62
CCNY-202ENST00000339497 APLP2Q06481 763 aa25.11■■□□□ 1.61
CCNY-202ENST00000339497 RANGAP1P46060 587 aaPredicted RBP24.91■■□□□ 1.58
CCNY-202ENST00000339497 UBTFP17480 764 aaKnown RBP24.69■■□□□ 1.54
CCNY-202ENST00000339497 CHIC1Q5VXU3 224 aa24.66■■□□□ 1.54
CCNY-202ENST00000339497 PPARGC1BQ86YN6 1023 aaKnown RBP24.59■■□□□ 1.53
CCNY-202ENST00000339497 CCER1Q8TC90 406 aaPredicted RBP24.59■■□□□ 1.53
CCNY-202ENST00000339497 LOC105371045A0A1W2PR82 267 aa24.57■■□□□ 1.52
CCNY-202ENST00000339497 ZEB1P37275 1124 aaPredicted RBP24.48■■□□□ 1.51
CCNY-202ENST00000339497 ATP1B4Q9UN42 357 aaPredicted RBP24.44■■□□□ 1.5
CCNY-202ENST00000339497 TRIM26Q12899 539 aaPredicted RBP24.31■■□□□ 1.48
CCNY-202ENST00000339497 PELP1Q8IZL8 1130 aaKnown RBP24.23■■□□□ 1.47
CCNY-202ENST00000339497 ABCC9O60706 1549 aa24.21■■□□□ 1.47
CCNY-202ENST00000339497 HRCP23327 699 aa24.17■■□□□ 1.46
CCNY-202ENST00000339497 CENPBP07199 599 aaPredicted RBP24.1■■□□□ 1.45
CCNY-202ENST00000339497 PABPN1Q86U42 306 aaKnown RBP eCLIP24.01■■□□□ 1.43
CCNY-202ENST00000339497 YTHDC1Q96MU7 727 aaKnown RBP23.91■■□□□ 1.42
CCNY-202ENST00000339497 ITGAEP38570 1179 aa23.88■■□□□ 1.41
CCNY-202ENST00000339497 HNRNPUL2Q1KMD3 747 aaKnown RBP23.85■■□□□ 1.41
CCNY-202ENST00000339497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.72■■□□□ 1.39
CCNY-202ENST00000339497 ZCCHC6Q5VYS8 1495 aaKnown RBP23.65■■□□□ 1.38
CCNY-202ENST00000339497 NEFLP07196 543 aa23.41■■□□□ 1.34
CCNY-202ENST00000339497 SCRIBQ14160 1630 aa23.38■■□□□ 1.33
CCNY-202ENST00000339497 DIEXFQ68CQ4 756 aaKnown RBP23.3■■□□□ 1.32
CCNY-202ENST00000339497 CSRNP3Q8WYN3 585 aa23.28■■□□□ 1.32
CCNY-202ENST00000339497 FAM50AQ14320 339 aaKnown RBP23.27■■□□□ 1.32
CCNY-202ENST00000339497 POLR3GLQ9BT43 218 aa23.26■■□□□ 1.31
CCNY-202ENST00000339497 ERICH6Q7L0X2 663 aa23.25■■□□□ 1.31
CCNY-202ENST00000339497 CCDC180Q9P1Z9 1646 aa23.23■■□□□ 1.31
CCNY-202ENST00000339497 CNGB1Q14028 1251 aaPredicted RBP23.19■■□□□ 1.3
CCNY-202ENST00000339497 MYT1LQ9UL68 1186 aa23.17■■□□□ 1.3
CCNY-202ENST00000339497 NEUROD1Q13562 356 aa23.07■■□□□ 1.28
CCNY-202ENST00000339497 P3H3Q8IVL6 736 aa23.05■■□□□ 1.28
CCNY-202ENST00000339497 TRIM52Q96A61 297 aa22.99■■□□□ 1.27
CCNY-202ENST00000339497 MYO15BQ96JP2 1530 aa22.91■■□□□ 1.26
CCNY-202ENST00000339497 FBLN2P98095 1184 aa22.9■■□□□ 1.26
CCNY-202ENST00000339497 DCAF1Q9Y4B6 1507 aa22.9■■□□□ 1.26
CCNY-202ENST00000339497 RSF1Q96T23 1441 aaPredicted RBP22.88■■□□□ 1.25
CCNY-202ENST00000339497 ARID3CA6NKF2 412 aa22.86■■□□□ 1.25
CCNY-202ENST00000339497 ZNF316A6NFI3 1004 aaPredicted RBP22.86■■□□□ 1.25
CCNY-202ENST00000339497 GTF3C3Q9Y5Q9 886 aa22.76■■□□□ 1.23
CCNY-202ENST00000339497 ZNF326Q5BKZ1 582 aaKnown RBP22.72■■□□□ 1.23
CCNY-202ENST00000339497 SLC4A1APQ9BWU0 796 aaKnown RBP22.62■■□□□ 1.21
CCNY-202ENST00000339497 RB1CC1Q8TDY2 1594 aa22.61■■□□□ 1.21
CCNY-202ENST00000339497 ANP32CO43423 234 aa22.61■■□□□ 1.21
CCNY-202ENST00000339497 BCANQ96GW7 911 aa22.59■■□□□ 1.21
CCNY-202ENST00000339497 ZNF777Q9ULD5 760 aaPredicted RBP22.54■■□□□ 1.2
CCNY-202ENST00000339497 NACADO15069 1562 aa22.52■■□□□ 1.2
CCNY-202ENST00000339497 ACIN1Q9UKV3 1341 aaKnown RBP22.52■■□□□ 1.2
CCNY-202ENST00000339497 CECR2Q9BXF3 1484 aa22.51■■□□□ 1.19
CCNY-202ENST00000339497 CLIP1P30622 1438 aa22.47■■□□□ 1.19
CCNY-202ENST00000339497 MYT1Q01538 1121 aa22.45■■□□□ 1.19
CCNY-202ENST00000339497 DAXXQ9UER7 740 aaPredicted RBP22.42■■□□□ 1.18
CCNY-202ENST00000339497 CEP162Q5TB80 1403 aa22.41■■□□□ 1.18
CCNY-202ENST00000339497 CDK11AQ9UQ88 783 aaPredicted RBP22.4■■□□□ 1.18
CCNY-202ENST00000339497 WRNQ14191 1432 aaPredicted RBP eCLIP22.39■■□□□ 1.17
CCNY-202ENST00000339497 CHIC2Q9UKJ5 165 aa22.35■■□□□ 1.17
CCNY-202ENST00000339497 EEA1Q15075 1411 aa22.32■■□□□ 1.16
CCNY-202ENST00000339497 TONSLQ96HA7 1378 aa22.32■■□□□ 1.16
CCNY-202ENST00000339497 DDX10Q13206 875 aaKnown RBP22.31■■□□□ 1.16
CCNY-202ENST00000339497 GOLGA3Q08378 1498 aa22.3■■□□□ 1.16
CCNY-202ENST00000339497 BAZ1BQ9UIG0 1483 aaKnown RBP22.29■■□□□ 1.16
CCNY-202ENST00000339497 BAZ1AQ9NRL2 1556 aaPredicted RBP22.26■■□□□ 1.15
CCNY-202ENST00000339497 TNIKQ9UKE5 1360 aa22.23■■□□□ 1.15
CCNY-202ENST00000339497 CLSPNQ9HAW4 1339 aa22.22■■□□□ 1.15
CCNY-202ENST00000339497 MTUS2Q5JR59 1369 aa22.22■■□□□ 1.15
CCNY-202ENST00000339497 MROH2BQ7Z745 1585 aa22.17■■□□□ 1.14
CCNY-202ENST00000339497 MIER1Q8N108 512 aa22.17■■□□□ 1.14
CCNY-202ENST00000339497 HIRIP3Q9BW71 556 aaPredicted RBP22.16■■□□□ 1.14
CCNY-202ENST00000339497 SOGA1O94964 1423 aa22.14■■□□□ 1.14
CCNY-202ENST00000339497 CEP164Q9UPV0 1460 aa22.11■■□□□ 1.13
CCNY-202ENST00000339497 KIF27Q86VH2 1401 aa22.1■■□□□ 1.13
CCNY-202ENST00000339497 CHMP7Q8WUX9 453 aaPredicted RBP22.09■■□□□ 1.13
CCNY-202ENST00000339497 RRP7BPQ9NSQ0 103 aa22.08■■□□□ 1.12
CCNY-202ENST00000339497 HNRNPUQ00839 825 aaKnown RBP eCLIP22.07■■□□□ 1.128e-7■□□□□ 8.5
CCNY-202ENST00000339497 FKBP8Q14318 412 aa22.05■■□□□ 1.12
CCNY-202ENST00000339497 FAM9BQ8IZU0 186 aa22.03■■□□□ 1.12
CCNY-202ENST00000339497 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.03■■□□□ 1.12
CCNY-202ENST00000339497 RTL5Q5HYW3 569 aaPredicted RBP22.01■■□□□ 1.11
CCNY-202ENST00000339497 CCDC88BA6NC98 1476 aa22■■□□□ 1.11
CCNY-202ENST00000339497 SCAF1Q9H7N4 1312 aaKnown RBP22■■□□□ 1.11
CCNY-202ENST00000339497 TSPY4P0CV99 314 aa22■■□□□ 1.11
CCNY-202ENST00000339497 TSPY10P0CW01 314 aa22■■□□□ 1.11
CCNY-202ENST00000339497 ABCC8Q09428 1581 aa21.97■■□□□ 1.11
CCNY-202ENST00000339497 CHGAP10645 457 aaKnown RBP21.97■■□□□ 1.11
CCNY-202ENST00000339497 KDM2AQ9Y2K7 1162 aa21.96■■□□□ 1.11
CCNY-202ENST00000339497 SALL2Q9Y467 1007 aaPredicted RBP21.91■■□□□ 1.1
CCNY-202ENST00000339497 CANXP27824 592 aaKnown RBP21.87■■□□□ 1.09
CCNY-202ENST00000339497 NPM1P06748 294 aaKnown RBP eCLIP21.86■■□□□ 1.09
CCNY-202ENST00000339497 SIN3AQ96ST3 1273 aa21.85■■□□□ 1.09
CCNY-202ENST00000339497 MRS2Q9HD23 443 aa21.85■■□□□ 1.09
CCNY-202ENST00000339497 EIF4G2P78344 907 aaKnown RBP eCLIP21.83■■□□□ 1.092e-6■■■■□ 23.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms