RNA–Protein interactions for RNA: ENST00000336714.7

SEC23B-202, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-202ENST00000336714 SPRYD3Q8NCJ5 442 aa14.55□□□□□ -0.08
SEC23B-202ENST00000336714 CCDC18Q5T9S5 1454 aa14.55□□□□□ -0.08
SEC23B-202ENST00000336714 NBPF8Q3BBV2 869 aa14.54□□□□□ -0.08
SEC23B-202ENST00000336714 AQRO60306 1485 aaKnown RBP eCLIP14.54□□□□□ -0.08
SEC23B-202ENST00000336714 BICRAQ9NZM4 1560 aa14.53□□□□□ -0.08
SEC23B-202ENST00000336714 RNF123Q5XPI4 1314 aa14.53□□□□□ -0.08
SEC23B-202ENST00000336714 LRRC9Q6ZRR7 1453 aa14.53□□□□□ -0.08
SEC23B-202ENST00000336714 ARID3AQ99856 593 aa14.53□□□□□ -0.08
SEC23B-202ENST00000336714 PRXQ9BXM0 1461 aa14.53□□□□□ -0.08
SEC23B-202ENST00000336714 MS4A1P11836 297 aa14.52□□□□□ -0.08
SEC23B-202ENST00000336714 ARID3CA6NKF2 412 aa14.51□□□□□ -0.09
SEC23B-202ENST00000336714 C20orf194Q5TEA3 1177 aa14.5□□□□□ -0.09
SEC23B-202ENST00000336714 PANK2Q9BZ23 570 aa14.5□□□□□ -0.09
SEC23B-202ENST00000336714 PNISRQ8TF01 805 aaKnown RBP14.49□□□□□ -0.09
SEC23B-202ENST00000336714 PEG3Q9GZU2 1588 aa14.48□□□□□ -0.09
SEC23B-202ENST00000336714 NCAPD3P42695 1498 aa14.48□□□□□ -0.09
SEC23B-202ENST00000336714 TIAM1Q13009 1591 aa14.47□□□□□ -0.09
SEC23B-202ENST00000336714 PTPRKQ15262 1439 aa14.46□□□□□ -0.1
SEC23B-202ENST00000336714 UACAQ9BZF9 1416 aa14.46□□□□□ -0.1
SEC23B-202ENST00000336714 NCOA1Q15788 1441 aa14.44□□□□□ -0.1
SEC23B-202ENST00000336714 KIF27Q86VH2 1401 aa14.43□□□□□ -0.1
SEC23B-202ENST00000336714 NCOA2Q15596 1464 aa14.43□□□□□ -0.1
SEC23B-202ENST00000336714 FAM161AQ3B820 660 aa14.42□□□□□ -0.1
SEC23B-202ENST00000336714 MPHOSPH9Q99550 1183 aa14.42□□□□□ -0.1
SEC23B-202ENST00000336714 MTUS2Q5JR59 1369 aa14.41□□□□□ -0.1
SEC23B-202ENST00000336714 FHOD3Q2V2M9 1422 aa14.41□□□□□ -0.1
SEC23B-202ENST00000336714 ERICH3Q5RHP9 1530 aa14.41□□□□□ -0.1
SEC23B-202ENST00000336714 RRP9O43818 475 aaKnown RBP14.4□□□□□ -0.1
SEC23B-202ENST00000336714 XRCC6P12956 609 aaKnown RBP eCLIP14.39□□□□□ -0.11
SEC23B-202ENST00000336714 C8orf34Q49A92 452 aa14.39□□□□□ -0.11
SEC23B-202ENST00000336714 L1TD1Q5T7N2 865 aaKnown RBP14.38□□□□□ -0.11
SEC23B-202ENST00000336714 GOLGA6L3A6NEY3 463 aa14.38□□□□□ -0.11
SEC23B-202ENST00000336714 KDM5BQ9UGL1 1544 aa14.36□□□□□ -0.11
SEC23B-202ENST00000336714 RBM10P98175 930 aaKnown RBP14.36□□□□□ -0.11
SEC23B-202ENST00000336714 FMN1Q68DA7 1419 aa14.36□□□□□ -0.11
SEC23B-202ENST00000336714 KDM2AQ9Y2K7 1162 aa14.36□□□□□ -0.11
SEC23B-202ENST00000336714 NAIPQ13075 1403 aa14.36□□□□□ -0.11
SEC23B-202ENST00000336714 FGD6Q6ZV73 1430 aa14.36□□□□□ -0.11
SEC23B-202ENST00000336714 MAP3K1Q13233 1512 aa14.35□□□□□ -0.11
SEC23B-202ENST00000336714 CC2D1BQ5T0F9 858 aaKnown RBP14.34□□□□□ -0.11
SEC23B-202ENST00000336714 SLC4A1APQ9BWU0 796 aaKnown RBP14.34□□□□□ -0.11
SEC23B-202ENST00000336714 SEC24BO95487 1268 aa14.34□□□□□ -0.11
SEC23B-202ENST00000336714 DHX29Q7Z478 1369 aaKnown RBP14.34□□□□□ -0.11
SEC23B-202ENST00000336714 HFM1A2PYH4 1435 aa14.33□□□□□ -0.12
SEC23B-202ENST00000336714 CLCN1P35523 988 aa14.3□□□□□ -0.12
SEC23B-202ENST00000336714 KTN1Q86UP2 1357 aaKnown RBP14.3□□□□□ -0.12
SEC23B-202ENST00000336714 TRIM44Q96DX7 344 aaPredicted RBP14.3□□□□□ -0.12
SEC23B-202ENST00000336714 TOP2BQ02880 1626 aa14.3□□□□□ -0.12
SEC23B-202ENST00000336714 CARMIL1Q5VZK9 1371 aa14.29□□□□□ -0.12
SEC23B-202ENST00000336714 ZBTB7CA1YPR0 619 aa14.29□□□□□ -0.12
SEC23B-202ENST00000336714 BECN1Q14457 450 aa14.28□□□□□ -0.12
SEC23B-202ENST00000336714 CENPQQ7L2Z9 268 aaPredicted RBP14.28□□□□□ -0.12
SEC23B-202ENST00000336714 USP47Q96K76 1375 aa14.28□□□□□ -0.12
SEC23B-202ENST00000336714 MYH16Q9H6N6 1097 aa14.28□□□□□ -0.12
SEC23B-202ENST00000336714 ERBB4Q15303 1308 aa14.27□□□□□ -0.12
SEC23B-202ENST00000336714 CARD11Q9BXL7 1154 aa14.27□□□□□ -0.13
SEC23B-202ENST00000336714 PTPN23Q9H3S7 1636 aa14.27□□□□□ -0.13
SEC23B-202ENST00000336714 PCF11O94913 1555 aaKnown RBP14.27□□□□□ -0.13
SEC23B-202ENST00000336714 ESPNB1AK53 854 aa14.27□□□□□ -0.13
SEC23B-202ENST00000336714 FAM13BQ9NYF5 915 aa14.26□□□□□ -0.13
SEC23B-202ENST00000336714 MYBBP1AQ9BQG0 1328 aaKnown RBP14.26□□□□□ -0.13
SEC23B-202ENST00000336714 IGF1RP08069 1367 aa14.25□□□□□ -0.13
SEC23B-202ENST00000336714 ST20-MTHFSA0A0A6YYL1 179 aa14.25□□□□□ -0.13
SEC23B-202ENST00000336714 PRDM10Q9NQV6 1147 aa14.25□□□□□ -0.13
SEC23B-202ENST00000336714 KDM2BQ8NHM5 1336 aa14.23□□□□□ -0.13
SEC23B-202ENST00000336714 KIAA1211Q6ZU35 1233 aa14.23□□□□□ -0.13
SEC23B-202ENST00000336714 ZHX1Q9UKY1 873 aaPredicted RBP14.22□□□□□ -0.13
SEC23B-202ENST00000336714 SLC24A1O60721 1099 aa14.22□□□□□ -0.13
SEC23B-202ENST00000336714 TRAK2O60296 914 aa14.21□□□□□ -0.13
SEC23B-202ENST00000336714 NLRP13Q86W25 1043 aa14.2□□□□□ -0.14
SEC23B-202ENST00000336714 PDE3BQ13370 1112 aa14.2□□□□□ -0.14
SEC23B-202ENST00000336714 CUX1P39880 1505 aa14.2□□□□□ -0.14
SEC23B-202ENST00000336714 KIF15Q9NS87 1388 aa14.19□□□□□ -0.14
SEC23B-202ENST00000336714 DENND4BO75064 1496 aaPredicted RBP14.19□□□□□ -0.14
SEC23B-202ENST00000336714 IGHDP01880 384 aa14.19□□□□□ -0.14
SEC23B-202ENST00000336714 CANXP27824 592 aaKnown RBP14.19□□□□□ -0.14
SEC23B-202ENST00000336714 MCM4P33991 863 aa14.19□□□□□ -0.14
SEC23B-202ENST00000336714 USP19O94966 1318 aa14.19□□□□□ -0.14
SEC23B-202ENST00000336714 TBC1D2Q9BYX2 928 aa14.18□□□□□ -0.14
SEC23B-202ENST00000336714 GRPEL1Q9HAV7 217 aa14.18□□□□□ -0.14
SEC23B-202ENST00000336714 CFTRP13569 1480 aa14.18□□□□□ -0.14
SEC23B-202ENST00000336714 BCAR3O75815 825 aa14.18□□□□□ -0.14
SEC23B-202ENST00000336714 SPATA31E1Q6ZUB1 1445 aa14.18□□□□□ -0.14
SEC23B-202ENST00000336714 UPF2Q9HAU5 1272 aaKnown RBP14.18□□□□□ -0.14
SEC23B-202ENST00000336714 FOXD4L1Q9NU39 408 aa14.18□□□□□ -0.14
SEC23B-202ENST00000336714 AMER1Q5JTC6 1135 aaPredicted RBP14.17□□□□□ -0.14
SEC23B-202ENST00000336714 LRPPRCP42704 1394 aaKnown RBP14.17□□□□□ -0.14
SEC23B-202ENST00000336714 RALBP1Q15311 655 aa14.16□□□□□ -0.14
SEC23B-202ENST00000336714 CCDC146Q8IYE0 955 aa14.16□□□□□ -0.14
SEC23B-202ENST00000336714 BRD4O60885 1362 aaPredicted RBP14.16□□□□□ -0.14
SEC23B-202ENST00000336714 PDCL3Q9H2J4 239 aa14.16□□□□□ -0.14
SEC23B-202ENST00000336714 MRE11P49959 708 aa14.15□□□□□ -0.14
SEC23B-202ENST00000336714 ATAD2BQ9ULI0 1458 aa14.15□□□□□ -0.14
SEC23B-202ENST00000336714 AAMPQ13685 434 aa14.15□□□□□ -0.14
SEC23B-202ENST00000336714 ADAMTS8Q9UP79 889 aa14.15□□□□□ -0.14
SEC23B-202ENST00000336714 R3HCC1Q9Y3T6 440 aaKnown RBP14.15□□□□□ -0.14
SEC23B-202ENST00000336714 COG6Q9Y2V7 657 aa14.14□□□□□ -0.15
SEC23B-202ENST00000336714 FSD2A1L4K1 749 aa14.13□□□□□ -0.15
SEC23B-202ENST00000336714 KDM6BO15054 1643 aa14.13□□□□□ -0.15
SEC23B-202ENST00000336714 MFAP1P55081 439 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms