RNA–Protein interactions for RNA: ENST00000334975.13

KTN1-201, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-201ENST00000334975 EFCAB5A4FU69 1503 aa11.54□□□□□ -0.56
KTN1-201ENST00000334975 ABCA8O94911 1581 aa11.53□□□□□ -0.56
KTN1-201ENST00000334975 ARHGAP35Q9NRY4 1499 aa11.52□□□□□ -0.56
KTN1-201ENST00000334975 MAPKBP1O60336 1514 aa11.51□□□□□ -0.57
KTN1-201ENST00000334975 KDM5BQ9UGL1 1544 aa11.51□□□□□ -0.57
KTN1-201ENST00000334975 ZCCHC11Q5TAX3 1644 aaKnown RBP11.5□□□□□ -0.57
KTN1-201ENST00000334975 FAM69CQ0P6D2 419 aa11.5□□□□□ -0.57
KTN1-201ENST00000334975 SSUH2Q9Y2M2 353 aa11.5□□□□□ -0.57
KTN1-201ENST00000334975 ASXL2Q76L83 1435 aa11.5□□□□□ -0.57
KTN1-201ENST00000334975 ATP1B4Q9UN42 357 aaPredicted RBP11.49□□□□□ -0.57
KTN1-201ENST00000334975 SPDYE2BA6NHP3 402 aa11.49□□□□□ -0.57
KTN1-201ENST00000334975 SPDYE6P0CI01 402 aa11.49□□□□□ -0.57
KTN1-201ENST00000334975 SPDYE2Q495Y8 402 aa11.49□□□□□ -0.57
KTN1-201ENST00000334975 RAPGEF6Q8TEU7 1601 aa11.48□□□□□ -0.57
KTN1-201ENST00000334975 GTF3C3Q9Y5Q9 886 aa11.48□□□□□ -0.57
KTN1-201ENST00000334975 CLIP1P30622 1438 aa11.48□□□□□ -0.57
KTN1-201ENST00000334975 ABCC10Q5T3U5 1492 aa11.48□□□□□ -0.57
KTN1-201ENST00000334975 KIF13AQ9H1H9 1805 aa11.46□□□□□ -0.57
KTN1-201ENST00000334975 FMN1Q68DA7 1419 aa11.46□□□□□ -0.58
KTN1-201ENST00000334975 ATP10BO94823 1461 aa11.46□□□□□ -0.58
KTN1-201ENST00000334975 NUP153P49790 1475 aaKnown RBP11.46□□□□□ -0.58
KTN1-201ENST00000334975 KLHL34Q8N239 644 aa11.46□□□□□ -0.58
KTN1-201ENST00000334975 KCNH8Q96L42 1107 aa11.46□□□□□ -0.58
KTN1-201ENST00000334975 CACNB1Q02641 598 aaPredicted RBP11.45□□□□□ -0.58
KTN1-201ENST00000334975 DIP2BQ9P265 1576 aa11.45□□□□□ -0.58
KTN1-201ENST00000334975 CEP162Q5TB80 1403 aa11.44□□□□□ -0.58
KTN1-201ENST00000334975 WDR7Q9Y4E6 1490 aa11.43□□□□□ -0.58
KTN1-201ENST00000334975 PODXL2Q9NZ53 605 aa11.42□□□□□ -0.58
KTN1-201ENST00000334975 EPRSP07814 1512 aaKnown RBP11.41□□□□□ -0.58
KTN1-201ENST00000334975 PKD2Q13563 968 aa11.41□□□□□ -0.58
KTN1-201ENST00000334975 TSPOAP1O95153 1857 aa11.4□□□□□ -0.58
KTN1-201ENST00000334975 CDK13Q14004 1512 aaKnown RBP11.4□□□□□ -0.58
KTN1-201ENST00000334975 PLEKHD1A6NEE1 506 aa11.39□□□□□ -0.59
KTN1-201ENST00000334975 HECW1Q76N89 1606 aa11.39□□□□□ -0.59
KTN1-201ENST00000334975 PCF11O94913 1555 aaKnown RBP11.38□□□□□ -0.59
KTN1-201ENST00000334975 GLI2P10070 1586 aa11.37□□□□□ -0.59
KTN1-201ENST00000334975 CASKIN1Q8WXD9 1431 aa11.37□□□□□ -0.59
KTN1-201ENST00000334975 LRRIQ1Q96JM4 1722 aa11.35□□□□□ -0.59
KTN1-201ENST00000334975 MAP3K4Q9Y6R4 1608 aa11.35□□□□□ -0.59
KTN1-201ENST00000334975 STAG3Q9UJ98 1225 aa11.34□□□□□ -0.59
KTN1-201ENST00000334975 CD109Q6YHK3 1445 aa11.34□□□□□ -0.59
KTN1-201ENST00000334975 CDK11AQ9UQ88 783 aaPredicted RBP11.34□□□□□ -0.59
KTN1-201ENST00000334975 FYCO1Q9BQS8 1478 aa11.34□□□□□ -0.59
KTN1-201ENST00000334975 PPRC1Q5VV67 1664 aaKnown RBP11.32□□□□□ -0.6
KTN1-201ENST00000334975 CCDC18Q5T9S5 1454 aa11.31□□□□□ -0.6
KTN1-201ENST00000334975 CFAP43Q8NDM7 1665 aa11.31□□□□□ -0.6
KTN1-201ENST00000334975 PLCD3Q8N3E9 789 aa11.31□□□□□ -0.6
KTN1-201ENST00000334975 PELP1Q8IZL8 1130 aaKnown RBP11.3□□□□□ -0.6
KTN1-201ENST00000334975 ABCA9Q8IUA7 1624 aa11.3□□□□□ -0.6
KTN1-201ENST00000334975 SPOCK2Q92563 424 aa11.3□□□□□ -0.6
KTN1-201ENST00000334975 KDM2AQ9Y2K7 1162 aa11.3□□□□□ -0.6
KTN1-201ENST00000334975 TEX14Q8IWB6 1497 aa11.29□□□□□ -0.6
KTN1-201ENST00000334975 VPS8Q8N3P4 1428 aa11.28□□□□□ -0.6
KTN1-201ENST00000334975 MIER1Q8N108 512 aa11.28□□□□□ -0.6
KTN1-201ENST00000334975 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.28□□□□□ -0.6
KTN1-201ENST00000334975 TROQ12816 1431 aaPredicted RBP11.28□□□□□ -0.6
KTN1-201ENST00000334975 MAGI3Q5TCQ9 1506 aa11.28□□□□□ -0.6
KTN1-201ENST00000334975 KDM6BO15054 1643 aa11.27□□□□□ -0.6
KTN1-201ENST00000334975 TTC37Q6PGP7 1564 aa11.27□□□□□ -0.6
KTN1-201ENST00000334975 KIF14Q15058 1648 aa11.27□□□□□ -0.61
KTN1-201ENST00000334975 ERICH6Q7L0X2 663 aa11.26□□□□□ -0.61
KTN1-201ENST00000334975 COL17A1Q9UMD9 1497 aaPredicted RBP11.25□□□□□ -0.61
KTN1-201ENST00000334975 TMEM132AQ24JP5 1023 aa11.24□□□□□ -0.61
KTN1-201ENST00000334975 VSIG10Q8N0Z9 540 aa11.24□□□□□ -0.61
KTN1-201ENST00000334975 MTUS2Q5JR59 1369 aa11.24□□□□□ -0.61
KTN1-201ENST00000334975 FANCAO15360 1455 aa11.22□□□□□ -0.61
KTN1-201ENST00000334975 PLCH2O75038 1416 aa11.21□□□□□ -0.61
KTN1-201ENST00000334975 TIAM1Q13009 1591 aa11.2□□□□□ -0.62
KTN1-201ENST00000334975 RAPGEF3O95398 923 aa11.2□□□□□ -0.62
KTN1-201ENST00000334975 NEO1Q92859 1461 aa11.2□□□□□ -0.62
KTN1-201ENST00000334975 MYO5CQ9NQX4 1742 aa11.2□□□□□ -0.62
KTN1-201ENST00000334975 AKNAQ7Z591 1439 aa11.19□□□□□ -0.62
KTN1-201ENST00000334975 ECM2O94769 699 aaPredicted RBP11.19□□□□□ -0.62
KTN1-201ENST00000334975 KANK4Q5T7N3 995 aaPredicted RBP11.19□□□□□ -0.62
KTN1-201ENST00000334975 EFCAB2Q5VUJ9 269 aa11.19□□□□□ -0.62
KTN1-201ENST00000334975 ARHGAP5Q13017 1502 aa11.19□□□□□ -0.62
KTN1-201ENST00000334975 ARAP3Q8WWN8 1544 aa11.18□□□□□ -0.62
KTN1-201ENST00000334975 PHLDB1Q86UU1 1377 aa11.18□□□□□ -0.62
KTN1-201ENST00000334975 EHBP1L1Q8N3D4 1523 aa11.18□□□□□ -0.62
KTN1-201ENST00000334975 ZNF777Q9ULD5 760 aaPredicted RBP11.17□□□□□ -0.62
KTN1-201ENST00000334975 CFAP74Q9C0B2 1584 aa11.16□□□□□ -0.62
KTN1-201ENST00000334975 CCNB3Q8WWL7 1395 aa11.16□□□□□ -0.62
KTN1-201ENST00000334975 CDC42BPBQ9Y5S2 1711 aa11.16□□□□□ -0.62
KTN1-201ENST00000334975 ADGRL1O94910 1474 aa11.16□□□□□ -0.62
KTN1-201ENST00000334975 LRRC9Q6ZRR7 1453 aa11.16□□□□□ -0.62
KTN1-201ENST00000334975 CDC42BPAQ5VT25 1732 aa11.15□□□□□ -0.62
KTN1-201ENST00000334975 PREX2Q70Z35 1606 aa11.15□□□□□ -0.62
KTN1-201ENST00000334975 GPATCH8Q9UKJ3 1502 aaKnown RBP11.15□□□□□ -0.62
KTN1-201ENST00000334975 SCAPERQ9BY12 1400 aa11.15□□□□□ -0.62
KTN1-201ENST00000334975 CFDP1Q9UEE9 299 aaPredicted RBP11.15□□□□□ -0.62
KTN1-201ENST00000334975 DENND4BO75064 1496 aaPredicted RBP11.14□□□□□ -0.63
KTN1-201ENST00000334975 MAP3K1Q13233 1512 aa11.14□□□□□ -0.63
KTN1-201ENST00000334975 NCOA2Q15596 1464 aa11.14□□□□□ -0.63
KTN1-201ENST00000334975 SUPT6HQ7KZ85 1726 aaKnown RBP11.13□□□□□ -0.63
KTN1-201ENST00000334975 RGL2O15211 777 aa11.13□□□□□ -0.63
KTN1-201ENST00000334975 FRMPD1Q5SYB0 1578 aa11.12□□□□□ -0.63
KTN1-201ENST00000334975 C14orf37Q86TY3 774 aa11.12□□□□□ -0.63
KTN1-201ENST00000334975 AFAP1Q8N556 730 aa11.12□□□□□ -0.63
KTN1-201ENST00000334975 ZNF644Q9H582 1327 aaPredicted RBP11.11□□□□□ -0.63
KTN1-201ENST00000334975 RICTORQ6R327 1708 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms