RNA–Protein interactions for RNA: ENST00000309166.7

NRIP3-201, Transcript of nuclear receptor interacting protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NRIP3, Length 3,809 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3-201ENST00000309166 CARMIL1Q5VZK9 1371 aa18.18■□□□□ 0.5
NRIP3-201ENST00000309166 PRXQ9BXM0 1461 aa18.18■□□□□ 0.5
NRIP3-201ENST00000309166 WASHC2CQ9Y4E1 1318 aa18.18■□□□□ 0.5
NRIP3-201ENST00000309166 FMN1Q68DA7 1419 aa18.16■□□□□ 0.5
NRIP3-201ENST00000309166 BECN1Q14457 450 aa18.16■□□□□ 0.5
NRIP3-201ENST00000309166 FAM43AQ8N2R8 423 aa18.16■□□□□ 0.5
NRIP3-201ENST00000309166 UACAQ9BZF9 1416 aa18.15■□□□□ 0.5
NRIP3-201ENST00000309166 CARD11Q9BXL7 1154 aa18.15■□□□□ 0.5
NRIP3-201ENST00000309166 FHOD3Q2V2M9 1422 aa18.15■□□□□ 0.5
NRIP3-201ENST00000309166 CDCA7LQ96GN5 454 aa18.14■□□□□ 0.49
NRIP3-201ENST00000309166 UPF2Q9HAU5 1272 aaKnown RBP18.14■□□□□ 0.49
NRIP3-201ENST00000309166 L1TD1Q5T7N2 865 aaKnown RBP18.14■□□□□ 0.49
NRIP3-201ENST00000309166 NBPF8Q3BBV2 869 aa18.13■□□□□ 0.49
NRIP3-201ENST00000309166 CC2D1BQ5T0F9 858 aaKnown RBP18.13■□□□□ 0.49
NRIP3-201ENST00000309166 ZNF777Q9ULD5 760 aaPredicted RBP18.13■□□□□ 0.49
NRIP3-201ENST00000309166 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.11■□□□□ 0.49
NRIP3-201ENST00000309166 PNISRQ8TF01 805 aaKnown RBP18.1■□□□□ 0.49
NRIP3-201ENST00000309166 TRIM44Q96DX7 344 aaPredicted RBP18.1■□□□□ 0.49
NRIP3-201ENST00000309166 FAM161AQ3B820 660 aa18.1■□□□□ 0.49
NRIP3-201ENST00000309166 ERICH3Q5RHP9 1530 aa18.08■□□□□ 0.48
NRIP3-201ENST00000309166 POGKQ9P215 609 aa18.07■□□□□ 0.48
NRIP3-201ENST00000309166 ZMYND15Q9H091 742 aa18.06■□□□□ 0.48
NRIP3-201ENST00000309166 WDR43Q15061 677 aaKnown RBP eCLIP18.05■□□□□ 0.48
NRIP3-201ENST00000309166 TIAM1Q13009 1591 aa18.05■□□□□ 0.48
NRIP3-201ENST00000309166 GOLGA6L3A6NEY3 463 aa18.04■□□□□ 0.48
NRIP3-201ENST00000309166 FGD6Q6ZV73 1430 aa18.04■□□□□ 0.48
NRIP3-201ENST00000309166 DCAF11Q8TEB1 546 aa18.02■□□□□ 0.48
NRIP3-201ENST00000309166 ARID3AQ99856 593 aa18.01■□□□□ 0.47
NRIP3-201ENST00000309166 PDE3BQ13370 1112 aa18■□□□□ 0.47
NRIP3-201ENST00000309166 CENPQQ7L2Z9 268 aaPredicted RBP17.99■□□□□ 0.47
NRIP3-201ENST00000309166 IGF1RP08069 1367 aa17.99■□□□□ 0.47
NRIP3-201ENST00000309166 MYBBP1AQ9BQG0 1328 aaKnown RBP17.99■□□□□ 0.47
NRIP3-201ENST00000309166 RALBP1Q15311 655 aa17.98■□□□□ 0.47
NRIP3-201ENST00000309166 USP47Q96K76 1375 aa17.97■□□□□ 0.47
NRIP3-201ENST00000309166 NLRP13Q86W25 1043 aa17.97■□□□□ 0.47
NRIP3-201ENST00000309166 ST20-MTHFSA0A0A6YYL1 179 aa17.97■□□□□ 0.47
NRIP3-201ENST00000309166 RGL3Q3MIN7 710 aa17.96■□□□□ 0.47
NRIP3-201ENST00000309166 C20orf194Q5TEA3 1177 aa17.96■□□□□ 0.47
NRIP3-201ENST00000309166 ANP32BQ92688 251 aaKnown RBP17.96■□□□□ 0.47
NRIP3-201ENST00000309166 NCOA1Q15788 1441 aa17.96■□□□□ 0.47
NRIP3-201ENST00000309166 HFM1A2PYH4 1435 aa17.95■□□□□ 0.46
NRIP3-201ENST00000309166 RRAGDQ9NQL2 400 aaPredicted RBP17.94■□□□□ 0.46
NRIP3-201ENST00000309166 RNF123Q5XPI4 1314 aa17.94■□□□□ 0.46
NRIP3-201ENST00000309166 AQRO60306 1485 aaKnown RBP eCLIP17.94■□□□□ 0.46
NRIP3-201ENST00000309166 ATAD2BQ9ULI0 1458 aa17.93■□□□□ 0.46
NRIP3-201ENST00000309166 NAIPQ13075 1403 aa17.93■□□□□ 0.46
NRIP3-201ENST00000309166 KIF15Q9NS87 1388 aa17.93■□□□□ 0.46
NRIP3-201ENST00000309166 MYH16Q9H6N6 1097 aa17.93■□□□□ 0.46
NRIP3-201ENST00000309166 KTN1Q86UP2 1357 aaKnown RBP17.92■□□□□ 0.46
NRIP3-201ENST00000309166 PKD2Q13563 968 aa17.91■□□□□ 0.46
NRIP3-201ENST00000309166 TOP2BQ02880 1626 aa17.9■□□□□ 0.46
NRIP3-201ENST00000309166 PTPRKQ15262 1439 aa17.89■□□□□ 0.46
NRIP3-201ENST00000309166 NEUROD2Q15784 382 aa17.86■□□□□ 0.45
NRIP3-201ENST00000309166 PODXL2Q9NZ53 605 aa17.86■□□□□ 0.45
NRIP3-201ENST00000309166 A0A0U1RQG5 324 aaPredicted RBP17.85■□□□□ 0.45
NRIP3-201ENST00000309166 RRP9O43818 475 aaKnown RBP17.83■□□□□ 0.45
NRIP3-201ENST00000309166 MAP3K1Q13233 1512 aa17.83■□□□□ 0.45
NRIP3-201ENST00000309166 CCDC146Q8IYE0 955 aa17.83■□□□□ 0.44
NRIP3-201ENST00000309166 PANK2Q9BZ23 570 aa17.83■□□□□ 0.44
NRIP3-201ENST00000309166 NCOA2Q15596 1464 aa17.83■□□□□ 0.44
NRIP3-201ENST00000309166 BRD4O60885 1362 aaPredicted RBP17.82■□□□□ 0.44
NRIP3-201ENST00000309166 NCLP19338 710 aaKnown RBP17.82■□□□□ 0.44
NRIP3-201ENST00000309166 GOLGA2Q08379 1002 aa17.82■□□□□ 0.44
NRIP3-201ENST00000309166 ROCK2O75116 1388 aaKnown RBP17.82■□□□□ 0.44
NRIP3-201ENST00000309166 MYOM3Q5VTT5 1437 aa17.81■□□□□ 0.44
NRIP3-201ENST00000309166 ZBTB7CA1YPR0 619 aa17.81■□□□□ 0.44
NRIP3-201ENST00000309166 C8orf34Q49A92 452 aa17.79■□□□□ 0.44
NRIP3-201ENST00000309166 KNSTRNQ9Y448 316 aa17.79■□□□□ 0.44
NRIP3-201ENST00000309166 MFAP1P55081 439 aaKnown RBP17.79■□□□□ 0.44
NRIP3-201ENST00000309166 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.79■□□□□ 0.44
NRIP3-201ENST00000309166 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.79■□□□□ 0.44
NRIP3-201ENST00000309166 COG6Q9Y2V7 657 aa17.78■□□□□ 0.44
NRIP3-201ENST00000309166 XRCC6P12956 609 aaKnown RBP eCLIP17.77■□□□□ 0.44
NRIP3-201ENST00000309166 CFTRP13569 1480 aa17.77■□□□□ 0.44
NRIP3-201ENST00000309166 CUX1P39880 1505 aa17.77■□□□□ 0.44
NRIP3-201ENST00000309166 MSNP26038 577 aaKnown RBP17.77■□□□□ 0.43
NRIP3-201ENST00000309166 RBM10P98175 930 aaKnown RBP17.77■□□□□ 0.43
NRIP3-201ENST00000309166 TRAK2O60296 914 aa17.76■□□□□ 0.43
NRIP3-201ENST00000309166 FOXD4L1Q9NU39 408 aa17.76■□□□□ 0.43
NRIP3-201ENST00000309166 ADAMTS8Q9UP79 889 aa17.76■□□□□ 0.43
NRIP3-201ENST00000309166 PANK3Q9H999 370 aa17.76■□□□□ 0.43
NRIP3-201ENST00000309166 PCF11O94913 1555 aaKnown RBP17.76■□□□□ 0.43
NRIP3-201ENST00000309166 CASKIN1Q8WXD9 1431 aa17.76■□□□□ 0.43
NRIP3-201ENST00000309166 HSCBQ8IWL3 235 aa17.76■□□□□ 0.43
NRIP3-201ENST00000309166 FAM13BQ9NYF5 915 aa17.76■□□□□ 0.43
NRIP3-201ENST00000309166 CFDP1Q9UEE9 299 aaPredicted RBP17.75■□□□□ 0.43
NRIP3-201ENST00000309166 ZNF644Q9H582 1327 aaPredicted RBP17.75■□□□□ 0.43
NRIP3-201ENST00000309166 CLUAP1Q96AJ1 413 aa17.75■□□□□ 0.43
NRIP3-201ENST00000309166 ESPNB1AK53 854 aa17.74■□□□□ 0.43
NRIP3-201ENST00000309166 DHX29Q7Z478 1369 aaKnown RBP17.74■□□□□ 0.43
NRIP3-201ENST00000309166 PTPN23Q9H3S7 1636 aa17.74■□□□□ 0.43
NRIP3-201ENST00000309166 HSP90AB1P08238 724 aaKnown RBP17.73■□□□□ 0.43
NRIP3-201ENST00000309166 MRE11P49959 708 aa17.73■□□□□ 0.43
NRIP3-201ENST00000309166 BCAR3O75815 825 aa17.71■□□□□ 0.43
NRIP3-201ENST00000309166 MCM4P33991 863 aa17.71■□□□□ 0.43
NRIP3-201ENST00000309166 FYCO1Q9BQS8 1478 aa17.7■□□□□ 0.42
NRIP3-201ENST00000309166 CLCN1P35523 988 aa17.7■□□□□ 0.42
NRIP3-201ENST00000309166 PANK1Q8TE04 598 aa17.7■□□□□ 0.42
NRIP3-201ENST00000309166 BCL2L13Q9BXK5 485 aa17.69■□□□□ 0.42
NRIP3-201ENST00000309166 SEC24BO95487 1268 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms