RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 RALBP1Q15311 655 aa21.15■□□□□ 0.98
BRD3-201ENST00000303407 PNNQ9H307 717 aaKnown RBP21.15■□□□□ 0.98
BRD3-201ENST00000303407 GGT6Q6P531 493 aa21.14■□□□□ 0.97
BRD3-201ENST00000303407 SAFB2Q14151 953 aaKnown RBP eCLIP21.13■□□□□ 0.97
BRD3-201ENST00000303407 MS4A1P11836 297 aa21.13■□□□□ 0.97
BRD3-201ENST00000303407 EFCAB2Q5VUJ9 269 aa21.13■□□□□ 0.97
BRD3-201ENST00000303407 FGD5Q6ZNL6 1462 aa21.12■□□□□ 0.97
BRD3-201ENST00000303407 A0A0G2JS52 829 aa21.12■□□□□ 0.97
BRD3-201ENST00000303407 GOLGA6L22H0YM25 854 aa21.12■□□□□ 0.97
BRD3-201ENST00000303407 RBM19Q9Y4C8 960 aaKnown RBP21.1■□□□□ 0.97
BRD3-201ENST00000303407 KIF21BO75037 1637 aa21.09■□□□□ 0.97
BRD3-201ENST00000303407 NCLP19338 710 aaKnown RBP21.08■□□□□ 0.97
BRD3-201ENST00000303407 MLECQ14165 292 aa21.08■□□□□ 0.97
BRD3-201ENST00000303407 CHMP4BQ9H444 224 aaKnown RBP21.07■□□□□ 0.96
BRD3-201ENST00000303407 ERICH6BQ5W0A0 696 aa21.07■□□□□ 0.96
BRD3-201ENST00000303407 IGF1RP08069 1367 aa21.06■□□□□ 0.96
BRD3-201ENST00000303407 STK26Q9P289 416 aa21.06■□□□□ 0.96
BRD3-201ENST00000303407 RCAN3Q9UKA8 241 aa21.06■□□□□ 0.96
BRD3-201ENST00000303407 EIF3AQ14152 1382 aaKnown RBP21.05■□□□□ 0.96
BRD3-201ENST00000303407 JPH4Q96JJ6 628 aa21.04■□□□□ 0.96
BRD3-201ENST00000303407 RAD54L2Q9Y4B4 1467 aa21.03■□□□□ 0.96
BRD3-201ENST00000303407 TRIM44Q96DX7 344 aaPredicted RBP21.02■□□□□ 0.96
BRD3-201ENST00000303407 HAP1P54257 671 aaPredicted RBP21.01■□□□□ 0.95
BRD3-201ENST00000303407 RSPH4AQ5TD94 716 aa21.01■□□□□ 0.95
BRD3-201ENST00000303407 HDGFP51858 240 aaKnown RBP21.01■□□□□ 0.95
BRD3-201ENST00000303407 LMOD2Q6P5Q4 547 aa21■□□□□ 0.95
BRD3-201ENST00000303407 KIF3BO15066 747 aa21■□□□□ 0.95
BRD3-201ENST00000303407 GAPVD1Q14C86 1478 aa20.99■□□□□ 0.95
BRD3-201ENST00000303407 HDGFL2Q7Z4V5 671 aaPredicted RBP20.99■□□□□ 0.95
BRD3-201ENST00000303407 SPAG9O60271 1321 aaKnown RBP20.97■□□□□ 0.95
BRD3-201ENST00000303407 SOX12O15370 315 aa20.97■□□□□ 0.95
BRD3-201ENST00000303407 HSP90AB1P08238 724 aaKnown RBP20.96■□□□□ 0.95
BRD3-201ENST00000303407 SYNJ1O43426 1573 aa20.95■□□□□ 0.94
BRD3-201ENST00000303407 KIF15Q9NS87 1388 aa20.94■□□□□ 0.94
BRD3-201ENST00000303407 CUX1P39880 1505 aa20.94■□□□□ 0.94
BRD3-201ENST00000303407 TSHZ2Q9NRE2 1034 aa20.93■□□□□ 0.94
BRD3-201ENST00000303407 NCAPD3P42695 1498 aa20.93■□□□□ 0.94
BRD3-201ENST00000303407 U2AF1L5P0DN76 240 aaPredicted RBP20.93■□□□□ 0.94
BRD3-201ENST00000303407 U2AF1Q01081 240 aaKnown RBP eCLIP20.93■□□□□ 0.94
BRD3-201ENST00000303407 GLIPR1L2Q4G1C9 344 aa20.93■□□□□ 0.94
BRD3-201ENST00000303407 CCDC144AA2RUR9 1427 aa20.92■□□□□ 0.94
BRD3-201ENST00000303407 LRRC9Q6ZRR7 1453 aa20.92■□□□□ 0.94
BRD3-201ENST00000303407 NLRP13Q86W25 1043 aa20.92■□□□□ 0.94
BRD3-201ENST00000303407 FGD6Q6ZV73 1430 aa20.92■□□□□ 0.94
BRD3-201ENST00000303407 TPRNQ4KMQ1 711 aa20.91■□□□□ 0.94
BRD3-201ENST00000303407 OS9Q13438 667 aaPredicted RBP20.9■□□□□ 0.94
BRD3-201ENST00000303407 PHLDB1Q86UU1 1377 aa20.9■□□□□ 0.94
BRD3-201ENST00000303407 ST20-MTHFSA0A0A6YYL1 179 aa20.89■□□□□ 0.94
BRD3-201ENST00000303407 ERICH3Q5RHP9 1530 aa20.89■□□□□ 0.93
BRD3-201ENST00000303407 MYBBP1AQ9BQG0 1328 aaKnown RBP20.89■□□□□ 0.93
BRD3-201ENST00000303407 HSCBQ8IWL3 235 aa20.89■□□□□ 0.93
BRD3-201ENST00000303407 CCDC146Q8IYE0 955 aa20.88■□□□□ 0.93
BRD3-201ENST00000303407 MYOM3Q5VTT5 1437 aa20.88■□□□□ 0.93
BRD3-201ENST00000303407 TCERG1O14776 1098 aaKnown RBP20.87■□□□□ 0.93
BRD3-201ENST00000303407 NUTM2DQ5VT03 806 aaPredicted RBP20.86■□□□□ 0.93
BRD3-201ENST00000303407 USP47Q96K76 1375 aa20.86■□□□□ 0.93
BRD3-201ENST00000303407 IPO8O15397 1037 aaKnown RBP20.86■□□□□ 0.93
BRD3-201ENST00000303407 PTPRGP23470 1445 aa20.86■□□□□ 0.93
BRD3-201ENST00000303407 GOLGA2Q08379 1002 aa20.85■□□□□ 0.93
BRD3-201ENST00000303407 RTF1Q92541 710 aaKnown RBP20.84■□□□□ 0.93
BRD3-201ENST00000303407 PTMAP06454 111 aaKnown RBP20.84■□□□□ 0.93
BRD3-201ENST00000303407 ITPRIPQ8IWB1 547 aa20.84■□□□□ 0.93
BRD3-201ENST00000303407 PRKRIP1Q9H875 184 aaPredicted RBP20.84■□□□□ 0.93
BRD3-201ENST00000303407 PDE3BQ13370 1112 aa20.83■□□□□ 0.93
BRD3-201ENST00000303407 SPRYD3Q8NCJ5 442 aa20.83■□□□□ 0.93
BRD3-201ENST00000303407 WASHC2CQ9Y4E1 1318 aa20.83■□□□□ 0.93
BRD3-201ENST00000303407 CASKIN1Q8WXD9 1431 aa20.83■□□□□ 0.92
BRD3-201ENST00000303407 PANK3Q9H999 370 aa20.83■□□□□ 0.92
BRD3-201ENST00000303407 PRDM2Q13029 1718 aa20.82■□□□□ 0.92
BRD3-201ENST00000303407 ARAP1Q96P48 1450 aa20.82■□□□□ 0.92
BRD3-201ENST00000303407 RWDD1Q9H446 243 aaPredicted RBP20.81■□□□□ 0.92
BRD3-201ENST00000303407 CALD1Q05682 793 aaKnown RBP20.81■□□□□ 0.92
BRD3-201ENST00000303407 UACAQ9BZF9 1416 aa20.8■□□□□ 0.92
BRD3-201ENST00000303407 RTN4Q9NQC3 1192 aaKnown RBP20.79■□□□□ 0.92
BRD3-201ENST00000303407 DEKP35659 375 aaKnown RBP20.79■□□□□ 0.92
BRD3-201ENST00000303407 NCOA2Q15596 1464 aa20.79■□□□□ 0.92
BRD3-201ENST00000303407 TERF2IPQ9NYB0 399 aa20.78■□□□□ 0.92
BRD3-201ENST00000303407 TRHP20396 242 aaPredicted RBP20.78■□□□□ 0.92
BRD3-201ENST00000303407 FYCO1Q9BQS8 1478 aa20.77■□□□□ 0.92
BRD3-201ENST00000303407 TRAK1Q9UPV9 953 aa20.77■□□□□ 0.92
BRD3-201ENST00000303407 TOP2BQ02880 1626 aa20.77■□□□□ 0.92
BRD3-201ENST00000303407 AQRO60306 1485 aaKnown RBP eCLIP20.77■□□□□ 0.911e-6■■■□□ 16.9
BRD3-201ENST00000303407 ZRSR1Q15695 479 aaKnown RBP20.77■□□□□ 0.91
BRD3-201ENST00000303407 PMFBP1Q8TBY8 1022 aa20.77■□□□□ 0.91
BRD3-201ENST00000303407 ZNF644Q9H582 1327 aaPredicted RBP20.76■□□□□ 0.91
BRD3-201ENST00000303407 CFTRP13569 1480 aa20.76■□□□□ 0.91
BRD3-201ENST00000303407 KCNJ4P48050 445 aa20.76■□□□□ 0.91
BRD3-201ENST00000303407 RRBP1Q9P2E9 1410 aaKnown RBP20.75■□□□□ 0.91
BRD3-201ENST00000303407 ZBED9Q6R2W3 1325 aa20.75■□□□□ 0.91
BRD3-201ENST00000303407 CENPJQ9HC77 1338 aaPredicted RBP20.75■□□□□ 0.91
BRD3-201ENST00000303407 SMC4Q9NTJ3 1288 aa20.75■□□□□ 0.91
BRD3-201ENST00000303407 APBB1O00213 710 aa20.74■□□□□ 0.91
BRD3-201ENST00000303407 MCCP23508 829 aa20.73■□□□□ 0.91
BRD3-201ENST00000303407 CFAP44Q96MT7 982 aa20.73■□□□□ 0.91
BRD3-201ENST00000303407 PAK3O75914 559 aaPredicted RBP20.73■□□□□ 0.91
BRD3-201ENST00000303407 FGD1P98174 961 aa20.7■□□□□ 0.9
BRD3-201ENST00000303407 IPO9Q96P70 1041 aaKnown RBP20.7■□□□□ 0.9
BRD3-201ENST00000303407 DNTTIP2Q5QJE6 756 aaKnown RBP20.69■□□□□ 0.9
BRD3-201ENST00000303407 CLUAP1Q96AJ1 413 aa20.68■□□□□ 0.9
BRD3-201ENST00000303407 CCDC7Q96M83 1385 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms