RNA–Protein interactions for RNA: ENST00000300146.9

PATL1-201, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PATL1, Length 4,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-201ENST00000300146 KIF3BO15066 747 aa8.74□□□□□ -1.01
PATL1-201ENST00000300146 KIF21BO75037 1637 aa8.74□□□□□ -1.01
PATL1-201ENST00000300146 TROQ12816 1431 aaPredicted RBP8.72□□□□□ -1.01
PATL1-201ENST00000300146 RRP7BPQ9NSQ0 103 aa8.72□□□□□ -1.01
PATL1-201ENST00000300146 SCAF1Q9H7N4 1312 aaKnown RBP8.71□□□□□ -1.02
PATL1-201ENST00000300146 SAMD9Q5K651 1589 aa8.7□□□□□ -1.02
PATL1-201ENST00000300146 EFCAB5A4FU69 1503 aa8.7□□□□□ -1.02
PATL1-201ENST00000300146 BCANQ96GW7 911 aa8.7□□□□□ -1.02
PATL1-201ENST00000300146 PLCH2O75038 1416 aa8.69□□□□□ -1.02
PATL1-201ENST00000300146 TRAPPC8Q9Y2L5 1435 aa8.69□□□□□ -1.02
PATL1-201ENST00000300146 CASKIN1Q8WXD9 1431 aa8.69□□□□□ -1.02
PATL1-201ENST00000300146 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.68□□□□□ -1.02
PATL1-201ENST00000300146 MAGI3Q5TCQ9 1506 aa8.68□□□□□ -1.02
PATL1-201ENST00000300146 CHGAP10645 457 aaKnown RBP8.68□□□□□ -1.02
PATL1-201ENST00000300146 ILDR1Q86SU0 546 aaPredicted RBP8.68□□□□□ -1.02
PATL1-201ENST00000300146 FBXO31Q5XUX0 539 aaPredicted RBP8.67□□□□□ -1.02
PATL1-201ENST00000300146 STAG3Q9UJ98 1225 aa8.67□□□□□ -1.02
PATL1-201ENST00000300146 PCF11O94913 1555 aaKnown RBP8.67□□□□□ -1.02
PATL1-201ENST00000300146 CCDC18Q5T9S5 1454 aa8.67□□□□□ -1.02
PATL1-201ENST00000300146 WASHC2CQ9Y4E1 1318 aa8.66□□□□□ -1.02
PATL1-201ENST00000300146 TTC37Q6PGP7 1564 aa8.66□□□□□ -1.02
PATL1-201ENST00000300146 KIF14Q15058 1648 aa8.66□□□□□ -1.02
PATL1-201ENST00000300146 GLI2P10070 1586 aa8.66□□□□□ -1.02
PATL1-201ENST00000300146 HECW1Q76N89 1606 aa8.65□□□□□ -1.02
PATL1-201ENST00000300146 POGZQ7Z3K3 1410 aa8.64□□□□□ -1.03
PATL1-201ENST00000300146 NEO1Q92859 1461 aa8.64□□□□□ -1.03
PATL1-201ENST00000300146 MAP3K4Q9Y6R4 1608 aa8.63□□□□□ -1.03
PATL1-201ENST00000300146 PPRC1Q5VV67 1664 aaKnown RBP8.63□□□□□ -1.03
PATL1-201ENST00000300146 NUTM2DQ5VT03 806 aaPredicted RBP8.63□□□□□ -1.03
PATL1-201ENST00000300146 PHLDB1Q86UU1 1377 aa8.62□□□□□ -1.03
PATL1-201ENST00000300146 NCKAP5LQ9HCH0 1330 aa8.61□□□□□ -1.03
PATL1-201ENST00000300146 VPS8Q8N3P4 1428 aa8.61□□□□□ -1.03
PATL1-201ENST00000300146 GPATCH8Q9UKJ3 1502 aaKnown RBP8.61□□□□□ -1.03
PATL1-201ENST00000300146 PTPRMP28827 1452 aa8.61□□□□□ -1.03
PATL1-201ENST00000300146 TRIM52Q96A61 297 aa8.6□□□□□ -1.03
PATL1-201ENST00000300146 CFAP43Q8NDM7 1665 aa8.6□□□□□ -1.03
PATL1-201ENST00000300146 ARAP3Q8WWN8 1544 aa8.6□□□□□ -1.03
PATL1-201ENST00000300146 RBM33Q96EV2 1170 aaKnown RBP8.6□□□□□ -1.03
PATL1-201ENST00000300146 FYCO1Q9BQS8 1478 aa8.6□□□□□ -1.03
PATL1-201ENST00000300146 ABCA9Q8IUA7 1624 aa8.59□□□□□ -1.03
PATL1-201ENST00000300146 ARHGEF12Q9NZN5 1544 aa8.59□□□□□ -1.03
PATL1-201ENST00000300146 PIP4K2BP78356 416 aa8.59□□□□□ -1.03
PATL1-201ENST00000300146 ATP10AO60312 1499 aa8.59□□□□□ -1.03
PATL1-201ENST00000300146 NCOA2Q15596 1464 aa8.59□□□□□ -1.03
PATL1-201ENST00000300146 ZFYVE16Q7Z3T8 1539 aa8.58□□□□□ -1.04
PATL1-201ENST00000300146 ZNF518AQ6AHZ1 1483 aa8.58□□□□□ -1.04
PATL1-201ENST00000300146 SYCP2Q9BX26 1530 aa8.58□□□□□ -1.04
PATL1-201ENST00000300146 ZMYM3Q14202 1370 aa8.56□□□□□ -1.04
PATL1-201ENST00000300146 C9orf84Q5VXU9 1444 aa8.55□□□□□ -1.04
PATL1-201ENST00000300146 MADDQ8WXG6 1647 aa8.53□□□□□ -1.04
PATL1-201ENST00000300146 HECW2Q9P2P5 1572 aa8.53□□□□□ -1.04
PATL1-201ENST00000300146 LRRC9Q6ZRR7 1453 aa8.53□□□□□ -1.04
PATL1-201ENST00000300146 PPP1R15AO75807 674 aaPredicted RBP8.53□□□□□ -1.04
PATL1-201ENST00000300146 UBAP1LF5GYI3 381 aa8.52□□□□□ -1.05
PATL1-201ENST00000300146 PLEKHG5O94827 1062 aa8.52□□□□□ -1.05
PATL1-201ENST00000300146 ZNF335Q9H4Z2 1342 aaPredicted RBP8.52□□□□□ -1.05
PATL1-201ENST00000300146 C14orf37Q86TY3 774 aa8.52□□□□□ -1.05
PATL1-201ENST00000300146 SLC26A8Q96RN1 970 aa8.52□□□□□ -1.05
PATL1-201ENST00000300146 RSPH4AQ5TD94 716 aa8.51□□□□□ -1.05
PATL1-201ENST00000300146 RIMS1Q86UR5 1692 aaKnown RBP8.51□□□□□ -1.05
PATL1-201ENST00000300146 UHRF1BP1Q6BDS2 1440 aa8.51□□□□□ -1.05
PATL1-201ENST00000300146 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.51□□□□□ -1.05
PATL1-201ENST00000300146 A2MP01023 1474 aa8.51□□□□□ -1.05
PATL1-201ENST00000300146 ZNF326Q5BKZ1 582 aaKnown RBP8.51□□□□□ -1.05
PATL1-201ENST00000300146 FOXD1Q16676 465 aa8.5□□□□□ -1.05
PATL1-201ENST00000300146 KIF15Q9NS87 1388 aa8.5□□□□□ -1.05
PATL1-201ENST00000300146 MYO5CQ9NQX4 1742 aa8.5□□□□□ -1.05
PATL1-201ENST00000300146 TXNDC2Q86VQ3 553 aa8.5□□□□□ -1.05
PATL1-201ENST00000300146 CERKQ8TCT0 537 aa8.5□□□□□ -1.05
PATL1-201ENST00000300146 CAMSAP2Q08AD1 1489 aa8.5□□□□□ -1.05
PATL1-201ENST00000300146 FRMPD1Q5SYB0 1578 aa8.5□□□□□ -1.05
PATL1-201ENST00000300146 DHX29Q7Z478 1369 aaKnown RBP8.49□□□□□ -1.05
PATL1-201ENST00000300146 LRRIQ1Q96JM4 1722 aa8.49□□□□□ -1.05
PATL1-201ENST00000300146 PPP6R1Q9UPN7 881 aa8.49□□□□□ -1.05
PATL1-201ENST00000300146 DMRT2Q9Y5R5 561 aa8.49□□□□□ -1.05
PATL1-201ENST00000300146 ANKLE2Q86XL3 938 aa8.49□□□□□ -1.05
PATL1-201ENST00000300146 MYOM3Q5VTT5 1437 aa8.49□□□□□ -1.05
PATL1-201ENST00000300146 PLEKHH2Q8IVE3 1493 aa8.48□□□□□ -1.05
PATL1-201ENST00000300146 RGL3Q3MIN7 710 aa8.48□□□□□ -1.05
PATL1-201ENST00000300146 EHBP1L1Q8N3D4 1523 aa8.48□□□□□ -1.05
PATL1-201ENST00000300146 SAMD9LQ8IVG5 1584 aa8.48□□□□□ -1.05
PATL1-201ENST00000300146 MAGI2Q86UL8 1455 aa8.48□□□□□ -1.05
PATL1-201ENST00000300146 THEMISQ8N1K5 641 aaPredicted RBP8.48□□□□□ -1.05
PATL1-201ENST00000300146 CFAP65Q6ZU64 1925 aaKnown RBP8.48□□□□□ -1.05
PATL1-201ENST00000300146 ARHGEF40Q8TER5 1519 aa8.47□□□□□ -1.05
PATL1-201ENST00000300146 TIAM1Q13009 1591 aa8.47□□□□□ -1.05
PATL1-201ENST00000300146 CDC42BPBQ9Y5S2 1711 aa8.47□□□□□ -1.05
PATL1-201ENST00000300146 CCDC141Q6ZP82 1450 aa8.47□□□□□ -1.05
PATL1-201ENST00000300146 SUPT6HQ7KZ85 1726 aaKnown RBP8.46□□□□□ -1.05
PATL1-201ENST00000300146 MLH3Q9UHC1 1453 aa8.46□□□□□ -1.05
PATL1-201ENST00000300146 ABCC1P33527 1531 aa8.46□□□□□ -1.05
PATL1-201ENST00000300146 EID1Q9Y6B2 187 aa8.46□□□□□ -1.06
PATL1-201ENST00000300146 IDI1Q13907 227 aa8.46□□□□□ -1.06
PATL1-201ENST00000300146 ANKRD30AQ9BXX3 1397 aa8.46□□□□□ -1.06
PATL1-201ENST00000300146 ATP7AQ04656 1500 aa8.45□□□□□ -1.06
PATL1-201ENST00000300146 MBD5Q9P267 1494 aa8.45□□□□□ -1.06
PATL1-201ENST00000300146 KIAA1107Q9UPP5 1409 aa8.45□□□□□ -1.06
PATL1-201ENST00000300146 KANK1Q14678 1352 aa8.45□□□□□ -1.06
PATL1-201ENST00000300146 TNRQ92752 1358 aa8.45□□□□□ -1.06
PATL1-201ENST00000300146 RICTORQ6R327 1708 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms