RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 PRKRIP1Q9H875 184 aaPredicted RBP14.91□□□□□ -0.02
DNMT3A-201ENST00000264709 TOP2BQ02880 1626 aa14.9□□□□□ -0.02
DNMT3A-201ENST00000264709 CDK11BP21127 795 aaKnown RBP14.9□□□□□ -0.02
DNMT3A-201ENST00000264709 ISY1Q9ULR0 285 aaKnown RBP14.9□□□□□ -0.02
DNMT3A-201ENST00000264709 EFCAB5A4FU69 1503 aa14.89□□□□□ -0.03
DNMT3A-201ENST00000264709 ESF1Q9H501 851 aaKnown RBP14.89□□□□□ -0.03
DNMT3A-201ENST00000264709 RGS3P49796 1198 aa14.89□□□□□ -0.03
DNMT3A-201ENST00000264709 MTERF4Q7Z6M4 381 aaKnown RBP14.89□□□□□ -0.03
DNMT3A-201ENST00000264709 SALL2Q9Y467 1007 aaPredicted RBP14.89□□□□□ -0.03
DNMT3A-201ENST00000264709 FYCO1Q9BQS8 1478 aa14.88□□□□□ -0.03
DNMT3A-201ENST00000264709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.88□□□□□ -0.035e-6■■□□□ 11.5
DNMT3A-201ENST00000264709 TIAM1Q13009 1591 aa14.87□□□□□ -0.03
DNMT3A-201ENST00000264709 FAM161AQ3B820 660 aa14.87□□□□□ -0.03
DNMT3A-201ENST00000264709 LRRC9Q6ZRR7 1453 aa14.86□□□□□ -0.03
DNMT3A-201ENST00000264709 PDE4AP27815 886 aa14.86□□□□□ -0.03
DNMT3A-201ENST00000264709 MYBBP1AQ9BQG0 1328 aaKnown RBP14.86□□□□□ -0.03
DNMT3A-201ENST00000264709 DNTTIP2Q5QJE6 756 aaKnown RBP14.86□□□□□ -0.03
DNMT3A-201ENST00000264709 SKOR2Q2VWA4 1001 aaPredicted RBP14.86□□□□□ -0.03
DNMT3A-201ENST00000264709 NRDCO43847 1150 aa14.85□□□□□ -0.03
DNMT3A-201ENST00000264709 MAP7D2Q96T17 732 aa14.85□□□□□ -0.03
DNMT3A-201ENST00000264709 CFDP1Q9UEE9 299 aaPredicted RBP14.85□□□□□ -0.03
DNMT3A-201ENST00000264709 SYAP1Q96A49 352 aaPredicted RBP14.84□□□□□ -0.03
DNMT3A-201ENST00000264709 HAP1P54257 671 aaPredicted RBP14.84□□□□□ -0.03
DNMT3A-201ENST00000264709 TMF1P82094 1093 aa14.84□□□□□ -0.03
DNMT3A-201ENST00000264709 SUPT6HQ7KZ85 1726 aaKnown RBP14.84□□□□□ -0.03
DNMT3A-201ENST00000264709 HSP90AB1P08238 724 aaKnown RBP14.83□□□□□ -0.04
DNMT3A-201ENST00000264709 GOLGA6L6A8MZA4 724 aa14.82□□□□□ -0.04
DNMT3A-201ENST00000264709 FGD6Q6ZV73 1430 aa14.82□□□□□ -0.04
DNMT3A-201ENST00000264709 CGNL1Q0VF96 1302 aa14.82□□□□□ -0.04
DNMT3A-201ENST00000264709 RRP1P56182 461 aaKnown RBP14.82□□□□□ -0.04
DNMT3A-201ENST00000264709 KIAA2012Q0VF49 1180 aa14.81□□□□□ -0.04
DNMT3A-201ENST00000264709 PMFBP1Q8TBY8 1022 aa14.81□□□□□ -0.04
DNMT3A-201ENST00000264709 RWDD1Q9H446 243 aaPredicted RBP14.81□□□□□ -0.04
DNMT3A-201ENST00000264709 SYNJ1O43426 1573 aa14.8□□□□□ -0.04
DNMT3A-201ENST00000264709 FAM43AQ8N2R8 423 aa14.8□□□□□ -0.04
DNMT3A-201ENST00000264709 MYOM3Q5VTT5 1437 aa14.8□□□□□ -0.04
DNMT3A-201ENST00000264709 WDR97A6NE52 1622 aa14.79□□□□□ -0.04
DNMT3A-201ENST00000264709 SMG6Q86US8 1419 aaKnown RBP14.79□□□□□ -0.04
DNMT3A-201ENST00000264709 BRD4O60885 1362 aaPredicted RBP14.79□□□□□ -0.04
DNMT3A-201ENST00000264709 KDM2AQ9Y2K7 1162 aa14.78□□□□□ -0.04
DNMT3A-201ENST00000264709 HFM1A2PYH4 1435 aa14.78□□□□□ -0.04
DNMT3A-201ENST00000264709 PRKCSHP14314 528 aaPredicted RBP14.78□□□□□ -0.04
DNMT3A-201ENST00000264709 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.78□□□□□ -0.04
DNMT3A-201ENST00000264709 ANKRD30AQ9BXX3 1397 aa14.78□□□□□ -0.04
DNMT3A-201ENST00000264709 PHF14O94880 888 aa14.78□□□□□ -0.04
DNMT3A-201ENST00000264709 MPHOSPH9Q99550 1183 aa14.77□□□□□ -0.05
DNMT3A-201ENST00000264709 MIA2Q96PC5 1412 aa14.77□□□□□ -0.05
DNMT3A-201ENST00000264709 RUSC2Q8N2Y8 1516 aa14.77□□□□□ -0.05
DNMT3A-201ENST00000264709 USP47Q96K76 1375 aa14.77□□□□□ -0.05
DNMT3A-201ENST00000264709 CCDC7Q96M83 1385 aa14.76□□□□□ -0.05
DNMT3A-201ENST00000264709 PLEKHH2Q8IVE3 1493 aa14.76□□□□□ -0.05
DNMT3A-201ENST00000264709 IPO8O15397 1037 aaKnown RBP14.76□□□□□ -0.05
DNMT3A-201ENST00000264709 CASKIN1Q8WXD9 1431 aa14.75□□□□□ -0.05
DNMT3A-201ENST00000264709 NINLQ9Y2I6 1382 aa14.75□□□□□ -0.05
DNMT3A-201ENST00000264709 KCNH8Q96L42 1107 aa14.75□□□□□ -0.05
DNMT3A-201ENST00000264709 WASHC2AQ641Q2 1341 aa14.74□□□□□ -0.05
DNMT3A-201ENST00000264709 WASHC2CQ9Y4E1 1318 aa14.74□□□□□ -0.05
DNMT3A-201ENST00000264709 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.74□□□□□ -0.05
DNMT3A-201ENST00000264709 PLEKHD1A6NEE1 506 aa14.74□□□□□ -0.05
DNMT3A-201ENST00000264709 RRP9O43818 475 aaKnown RBP14.73□□□□□ -0.05
DNMT3A-201ENST00000264709 CSPP1Q1MSJ5 1256 aa14.72□□□□□ -0.05
DNMT3A-201ENST00000264709 L3MBTL2Q969R5 705 aa14.72□□□□□ -0.05
DNMT3A-201ENST00000264709 PRXQ9BXM0 1461 aa14.72□□□□□ -0.05
DNMT3A-201ENST00000264709 GOLGA2Q08379 1002 aa14.72□□□□□ -0.05
DNMT3A-201ENST00000264709 ATAD2BQ9ULI0 1458 aa14.72□□□□□ -0.05
DNMT3A-201ENST00000264709 ZRSR1Q15695 479 aaKnown RBP14.72□□□□□ -0.05
DNMT3A-201ENST00000264709 EHBP1L1Q8N3D4 1523 aa14.72□□□□□ -0.05
DNMT3A-201ENST00000264709 ARAP1Q96P48 1450 aa14.71□□□□□ -0.05
DNMT3A-201ENST00000264709 FBLN2P98095 1184 aa14.71□□□□□ -0.05
DNMT3A-201ENST00000264709 STAG3Q9UJ98 1225 aa14.71□□□□□ -0.06
DNMT3A-201ENST00000264709 MCCP23508 829 aa14.7□□□□□ -0.06
DNMT3A-201ENST00000264709 SLKQ9H2G2 1235 aaPredicted RBP14.69□□□□□ -0.06
DNMT3A-201ENST00000264709 TPM2P07951 284 aa14.69□□□□□ -0.06
DNMT3A-201ENST00000264709 CALD1Q05682 793 aaKnown RBP14.68□□□□□ -0.06
DNMT3A-201ENST00000264709 ARID3CA6NKF2 412 aa14.68□□□□□ -0.06
DNMT3A-201ENST00000264709 NFKBIBQ15653 356 aa14.67□□□□□ -0.06
DNMT3A-201ENST00000264709 MRE11P49959 708 aa14.67□□□□□ -0.06
DNMT3A-201ENST00000264709 EIF4G1Q04637 1599 aaKnown RBP14.67□□□□□ -0.06
DNMT3A-201ENST00000264709 FHOD3Q2V2M9 1422 aa14.66□□□□□ -0.06
DNMT3A-201ENST00000264709 RSPH4AQ5TD94 716 aa14.65□□□□□ -0.06
DNMT3A-201ENST00000264709 CENPJQ9HC77 1338 aaPredicted RBP14.65□□□□□ -0.06
DNMT3A-201ENST00000264709 AQRO60306 1485 aaKnown RBP eCLIP14.65□□□□□ -0.061e-7■■■■■ 30
DNMT3A-201ENST00000264709 FRAT1Q92837 279 aaPredicted RBP14.65□□□□□ -0.06
DNMT3A-201ENST00000264709 NPM1P06748 294 aaKnown RBP eCLIP14.65□□□□□ -0.06
DNMT3A-201ENST00000264709 DCAF11Q8TEB1 546 aa14.65□□□□□ -0.06
DNMT3A-201ENST00000264709 BIVM-ERCC5R4GMW8 1640 aa14.64□□□□□ -0.07
DNMT3A-201ENST00000264709 VSIG10Q8N0Z9 540 aa14.64□□□□□ -0.07
DNMT3A-201ENST00000264709 E9PSI1 815 aa14.63□□□□□ -0.07
DNMT3A-201ENST00000264709 KANK1Q14678 1352 aa14.63□□□□□ -0.07
DNMT3A-201ENST00000264709 PKNOX2Q96KN3 472 aa14.63□□□□□ -0.07
DNMT3A-201ENST00000264709 HECW1Q76N89 1606 aa14.63□□□□□ -0.07
DNMT3A-201ENST00000264709 CUL7Q14999 1698 aa14.62□□□□□ -0.07
DNMT3A-201ENST00000264709 PEG3Q9GZU2 1588 aa14.62□□□□□ -0.07
DNMT3A-201ENST00000264709 BACH2Q9BYV9 841 aa14.62□□□□□ -0.07
DNMT3A-201ENST00000264709 UBE2Q2Q8WVN8 375 aa14.62□□□□□ -0.07
DNMT3A-201ENST00000264709 PKD2Q13563 968 aa14.61□□□□□ -0.07
DNMT3A-201ENST00000264709 STAC3Q96MF2 364 aa14.61□□□□□ -0.07
DNMT3A-201ENST00000264709 NUP155O75694 1391 aa14.61□□□□□ -0.07
DNMT3A-201ENST00000264709 CCDC144AA2RUR9 1427 aa14.61□□□□□ -0.07
DNMT3A-201ENST00000264709 FGD5Q6ZNL6 1462 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms