RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 NISCHQ9Y2I1 1504 aa20.1■□□□□ 0.81
DNMT3A-201ENST00000264709 PELP1Q8IZL8 1130 aaKnown RBP19.14■□□□□ 0.66
DNMT3A-201ENST00000264709 MYT1Q01538 1121 aa18.97■□□□□ 0.63
DNMT3A-201ENST00000264709 ZEB1P37275 1124 aaPredicted RBP18.53■□□□□ 0.56
DNMT3A-201ENST00000264709 SUPT5HO00267 1087 aaKnown RBP18.51■□□□□ 0.55
DNMT3A-201ENST00000264709 CENPBP07199 599 aaPredicted RBP18.24■□□□□ 0.51
DNMT3A-201ENST00000264709 DCAF8L2P0C7V8 631 aa18.23■□□□□ 0.51
DNMT3A-201ENST00000264709 PCGF6Q9BYE7 350 aa18.17■□□□□ 0.5
DNMT3A-201ENST00000264709 HRCP23327 699 aa18.15■□□□□ 0.5
DNMT3A-201ENST00000264709 SHROOM4Q9ULL8 1493 aa18.11■□□□□ 0.49
DNMT3A-201ENST00000264709 TRIM26Q12899 539 aaPredicted RBP17.8■□□□□ 0.44
DNMT3A-201ENST00000264709 CCER1Q8TC90 406 aaPredicted RBP17.68■□□□□ 0.42
DNMT3A-201ENST00000264709 APLP2Q06481 763 aa17.61■□□□□ 0.41
DNMT3A-201ENST00000264709 TTBK1Q5TCY1 1321 aaPredicted RBP17.58■□□□□ 0.4
DNMT3A-201ENST00000264709 TRIM41Q8WV44 630 aa17.46■□□□□ 0.39
DNMT3A-201ENST00000264709 CHIC1Q5VXU3 224 aa17.43■□□□□ 0.38
DNMT3A-201ENST00000264709 DCAF1Q9Y4B6 1507 aa17.41■□□□□ 0.38
DNMT3A-201ENST00000264709 FAM9AQ8IZU1 332 aaPredicted RBP17.38■□□□□ 0.37
DNMT3A-201ENST00000264709 ERICH6Q7L0X2 663 aa17.34■□□□□ 0.37
DNMT3A-201ENST00000264709 NEFLP07196 543 aa17.34■□□□□ 0.37
DNMT3A-201ENST00000264709 CLSPNQ9HAW4 1339 aa17.31■□□□□ 0.36
DNMT3A-201ENST00000264709 CCDC180Q9P1Z9 1646 aa17.21■□□□□ 0.35
DNMT3A-201ENST00000264709 DIEXFQ68CQ4 756 aaKnown RBP17.11■□□□□ 0.33
DNMT3A-201ENST00000264709 PPARGC1BQ86YN6 1023 aaKnown RBP17.07■□□□□ 0.32
DNMT3A-201ENST00000264709 ACIN1Q9UKV3 1341 aaKnown RBP17.01■□□□□ 0.31
DNMT3A-201ENST00000264709 EHMT2Q96KQ7 1210 aa17■□□□□ 0.31
DNMT3A-201ENST00000264709 YTHDC1Q96MU7 727 aaKnown RBP17■□□□□ 0.31
DNMT3A-201ENST00000264709 ZCCHC6Q5VYS8 1495 aaKnown RBP16.92■□□□□ 0.3
DNMT3A-201ENST00000264709 UBTFP17480 764 aaKnown RBP16.91■□□□□ 0.3
DNMT3A-201ENST00000264709 GTF3C3Q9Y5Q9 886 aa16.9■□□□□ 0.3
DNMT3A-201ENST00000264709 LOC105371045A0A1W2PR82 267 aa16.86■□□□□ 0.29
DNMT3A-201ENST00000264709 MYT1LQ9UL68 1186 aa16.85■□□□□ 0.29
DNMT3A-201ENST00000264709 ZNF316A6NFI3 1004 aaPredicted RBP16.71■□□□□ 0.27
DNMT3A-201ENST00000264709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.69■□□□□ 0.26
DNMT3A-201ENST00000264709 RTL5Q5HYW3 569 aaPredicted RBP16.67■□□□□ 0.26
DNMT3A-201ENST00000264709 SCAF1Q9H7N4 1312 aaKnown RBP16.61■□□□□ 0.25
DNMT3A-201ENST00000264709 DAXXQ9UER7 740 aaPredicted RBP16.56■□□□□ 0.24
DNMT3A-201ENST00000264709 MYO15BQ96JP2 1530 aa16.49■□□□□ 0.23
DNMT3A-201ENST00000264709 NEUROD1Q13562 356 aa16.44■□□□□ 0.22
DNMT3A-201ENST00000264709 CDK11AQ9UQ88 783 aaPredicted RBP16.44■□□□□ 0.22
DNMT3A-201ENST00000264709 HNRNPUL2Q1KMD3 747 aaKnown RBP16.41■□□□□ 0.22
DNMT3A-201ENST00000264709 EEA1Q15075 1411 aa16.38■□□□□ 0.21
DNMT3A-201ENST00000264709 ANP32CO43423 234 aa16.33■□□□□ 0.21
DNMT3A-201ENST00000264709 ANP32AP39687 249 aaKnown RBP16.24■□□□□ 0.19
DNMT3A-201ENST00000264709 RANGAP1P46060 587 aaPredicted RBP16.24■□□□□ 0.19
DNMT3A-201ENST00000264709 ANP32EQ9BTT0 268 aa16.23■□□□□ 0.19
DNMT3A-201ENST00000264709 ABCC9O60706 1549 aa16.23■□□□□ 0.19
DNMT3A-201ENST00000264709 RB1CC1Q8TDY2 1594 aa16.22■□□□□ 0.19
DNMT3A-201ENST00000264709 SCRIBQ14160 1630 aa16.16■□□□□ 0.18
DNMT3A-201ENST00000264709 GLIPR1L2Q4G1C9 344 aa16.15■□□□□ 0.18
DNMT3A-201ENST00000264709 CSRNP3Q8WYN3 585 aa16.14■□□□□ 0.17
DNMT3A-201ENST00000264709 ATP1B4Q9UN42 357 aaPredicted RBP16.11■□□□□ 0.17
DNMT3A-201ENST00000264709 GOLGA3Q08378 1498 aa16.06■□□□□ 0.16
DNMT3A-201ENST00000264709 CEP162Q5TB80 1403 aa16.05■□□□□ 0.16
DNMT3A-201ENST00000264709 BCANQ96GW7 911 aa16.05■□□□□ 0.16
DNMT3A-201ENST00000264709 ITGAEP38570 1179 aa16.03■□□□□ 0.16
DNMT3A-201ENST00000264709 CLIP1P30622 1438 aa16.01■□□□□ 0.15
DNMT3A-201ENST00000264709 FKBP8Q14318 412 aa16.01■□□□□ 0.15
DNMT3A-201ENST00000264709 TNIKQ9UKE5 1360 aa16■□□□□ 0.15
DNMT3A-201ENST00000264709 MIER1Q8N108 512 aa15.99■□□□□ 0.15
DNMT3A-201ENST00000264709 RSF1Q96T23 1441 aaPredicted RBP15.99■□□□□ 0.15
DNMT3A-201ENST00000264709 CEP164Q9UPV0 1460 aa15.95■□□□□ 0.14
DNMT3A-201ENST00000264709 NACADO15069 1562 aa15.95■□□□□ 0.14
DNMT3A-201ENST00000264709 TONSLQ96HA7 1378 aa15.94■□□□□ 0.14
DNMT3A-201ENST00000264709 ERICH6BQ5W0A0 696 aa15.9■□□□□ 0.14
DNMT3A-201ENST00000264709 FAM50AQ14320 339 aaKnown RBP15.89■□□□□ 0.13
DNMT3A-201ENST00000264709 BCL11AQ9H165 835 aa15.89■□□□□ 0.13
DNMT3A-201ENST00000264709 WRNQ14191 1432 aaPredicted RBP eCLIP15.88■□□□□ 0.13
DNMT3A-201ENST00000264709 BAZ1AQ9NRL2 1556 aaPredicted RBP15.88■□□□□ 0.13
DNMT3A-201ENST00000264709 SUPT16HQ9Y5B9 1047 aaKnown RBP15.85■□□□□ 0.13
DNMT3A-201ENST00000264709 TIMELESSQ9UNS1 1208 aa15.84■□□□□ 0.13
DNMT3A-201ENST00000264709 ZBTB47Q9UFB7 747 aaPredicted RBP15.83■□□□□ 0.13
DNMT3A-201ENST00000264709 HNRNPUQ00839 825 aaKnown RBP eCLIP15.81■□□□□ 0.12
DNMT3A-201ENST00000264709 CCDC136Q96JN2 1154 aa15.74■□□□□ 0.11
DNMT3A-201ENST00000264709 DDRGK1Q96HY6 314 aa15.74■□□□□ 0.11
DNMT3A-201ENST00000264709 CCER2I3L3R5 266 aa15.74■□□□□ 0.11
DNMT3A-201ENST00000264709 VPS8Q8N3P4 1428 aa15.73■□□□□ 0.11
DNMT3A-201ENST00000264709 ANP32BQ92688 251 aaKnown RBP15.73■□□□□ 0.11
DNMT3A-201ENST00000264709 UPF2Q9HAU5 1272 aaKnown RBP15.71■□□□□ 0.1
DNMT3A-201ENST00000264709 POLR3GLQ9BT43 218 aa15.71■□□□□ 0.1
DNMT3A-201ENST00000264709 EIF5BO60841 1220 aaKnown RBP15.69■□□□□ 0.1
DNMT3A-201ENST00000264709 DDX10Q13206 875 aaKnown RBP15.69■□□□□ 0.1
DNMT3A-201ENST00000264709 PPM1GO15355 546 aaPredicted RBP15.69■□□□□ 0.1
DNMT3A-201ENST00000264709 PPP4R2Q9NY27 417 aa15.66■□□□□ 0.1
DNMT3A-201ENST00000264709 TRIM52Q96A61 297 aa15.65■□□□□ 0.1
DNMT3A-201ENST00000264709 BAZ1BQ9UIG0 1483 aaKnown RBP15.64■□□□□ 0.09
DNMT3A-201ENST00000264709 NOP58Q9Y2X3 529 aaKnown RBP15.64■□□□□ 0.09
DNMT3A-201ENST00000264709 FHAD1B1AJZ9 1412 aa15.59■□□□□ 0.09
DNMT3A-201ENST00000264709 NBR1Q14596 966 aa15.59■□□□□ 0.09
DNMT3A-201ENST00000264709 CCNB3Q8WWL7 1395 aa15.59■□□□□ 0.09
DNMT3A-201ENST00000264709 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.58■□□□□ 0.09
DNMT3A-201ENST00000264709 RBM19Q9Y4C8 960 aaKnown RBP15.58■□□□□ 0.09
DNMT3A-201ENST00000264709 MRS2Q9HD23 443 aa15.57■□□□□ 0.08
DNMT3A-201ENST00000264709 BECN1Q14457 450 aa15.55■□□□□ 0.08
DNMT3A-201ENST00000264709 EIF4G2P78344 907 aaKnown RBP eCLIP15.55■□□□□ 0.08
DNMT3A-201ENST00000264709 NEFMP07197 916 aa15.54■□□□□ 0.08
DNMT3A-201ENST00000264709 KIF27Q86VH2 1401 aa15.54■□□□□ 0.08
DNMT3A-201ENST00000264709 TOP2AP11388 1531 aaKnown RBP15.53■□□□□ 0.08
DNMT3A-201ENST00000264709 TSHZ2Q9NRE2 1034 aa15.53■□□□□ 0.08
DNMT3A-201ENST00000264709 USP35Q9P2H5 1018 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms