RNA–Protein interactions for RNA: ENST00000231524.13

TRIM23-201, Transcript of tripartite motif containing 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM23, Length 4,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-201ENST00000231524 HSP90AA1P07900 732 aaKnown RBP12.73□□□□□ -0.37
TRIM23-201ENST00000231524 NFKBIBQ15653 356 aa12.73□□□□□ -0.37
TRIM23-201ENST00000231524 TRIM44Q96DX7 344 aaPredicted RBP12.73□□□□□ -0.37
TRIM23-201ENST00000231524 AKNAQ7Z591 1439 aa12.72□□□□□ -0.37
TRIM23-201ENST00000231524 PLIN1O60240 522 aa12.72□□□□□ -0.37
TRIM23-201ENST00000231524 SLKQ9H2G2 1235 aaPredicted RBP12.72□□□□□ -0.37
TRIM23-201ENST00000231524 FHOD3Q2V2M9 1422 aa12.72□□□□□ -0.37
TRIM23-201ENST00000231524 RRP1P56182 461 aaKnown RBP12.72□□□□□ -0.37
TRIM23-201ENST00000231524 FRAT1Q92837 279 aaPredicted RBP12.71□□□□□ -0.37
TRIM23-201ENST00000231524 CUX1P39880 1505 aa12.71□□□□□ -0.37
TRIM23-201ENST00000231524 PEG3Q9GZU2 1588 aa12.7□□□□□ -0.38
TRIM23-201ENST00000231524 PNNQ9H307 717 aaKnown RBP12.7□□□□□ -0.38
TRIM23-201ENST00000231524 VSIG10Q8N0Z9 540 aa12.7□□□□□ -0.38
TRIM23-201ENST00000231524 CC2D1BQ5T0F9 858 aaKnown RBP12.7□□□□□ -0.38
TRIM23-201ENST00000231524 L1TD1Q5T7N2 865 aaKnown RBP12.69□□□□□ -0.38
TRIM23-201ENST00000231524 GZF1Q9H116 711 aaPredicted RBP12.69□□□□□ -0.38
TRIM23-201ENST00000231524 PLEKHD1A6NEE1 506 aa12.69□□□□□ -0.38
TRIM23-201ENST00000231524 SPRYD3Q8NCJ5 442 aa12.68□□□□□ -0.38
TRIM23-201ENST00000231524 MS4A1P11836 297 aa12.68□□□□□ -0.38
TRIM23-201ENST00000231524 FMN1Q68DA7 1419 aa12.68□□□□□ -0.38
TRIM23-201ENST00000231524 CCDC7Q96M83 1385 aa12.67□□□□□ -0.38
TRIM23-201ENST00000231524 CNTLNQ9NXG0 1405 aa12.66□□□□□ -0.38
TRIM23-201ENST00000231524 AQRO60306 1485 aaKnown RBP eCLIP12.66□□□□□ -0.38
TRIM23-201ENST00000231524 CCDC18Q5T9S5 1454 aa12.65□□□□□ -0.38
TRIM23-201ENST00000231524 NPM1P06748 294 aaKnown RBP eCLIP12.65□□□□□ -0.38
TRIM23-201ENST00000231524 KIF7Q2M1P5 1343 aa12.65□□□□□ -0.38
TRIM23-201ENST00000231524 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.65□□□□□ -0.38
TRIM23-201ENST00000231524 TOP2BQ02880 1626 aa12.65□□□□□ -0.38
TRIM23-201ENST00000231524 RGL3Q3MIN7 710 aa12.65□□□□□ -0.38
TRIM23-201ENST00000231524 BACH2Q9BYV9 841 aa12.64□□□□□ -0.39
TRIM23-201ENST00000231524 CRBNQ96SW2 442 aa12.64□□□□□ -0.39
TRIM23-201ENST00000231524 GAPVD1Q14C86 1478 aa12.64□□□□□ -0.39
TRIM23-201ENST00000231524 CFDP1Q9UEE9 299 aaPredicted RBP12.64□□□□□ -0.39
TRIM23-201ENST00000231524 TSPY4P0CV99 314 aa12.63□□□□□ -0.39
TRIM23-201ENST00000231524 TSPY10P0CW01 314 aa12.63□□□□□ -0.39
TRIM23-201ENST00000231524 HSP90AA2PQ14568 343 aaPredicted RBP12.63□□□□□ -0.39
TRIM23-201ENST00000231524 FRAT2O75474 233 aaPredicted RBP12.62□□□□□ -0.39
TRIM23-201ENST00000231524 TOPBP1Q92547 1522 aa12.61□□□□□ -0.39
TRIM23-201ENST00000231524 UBE2Q2Q8WVN8 375 aa12.61□□□□□ -0.39
TRIM23-201ENST00000231524 RALBP1Q15311 655 aa12.61□□□□□ -0.39
TRIM23-201ENST00000231524 FAM161AQ3B820 660 aa12.61□□□□□ -0.39
TRIM23-201ENST00000231524 PDE3BQ13370 1112 aa12.6□□□□□ -0.39
TRIM23-201ENST00000231524 C11orf95C9JLR9 678 aaPredicted RBP12.6□□□□□ -0.39
TRIM23-201ENST00000231524 POLA1P09884 1462 aaPredicted RBP12.6□□□□□ -0.39
TRIM23-201ENST00000231524 LRRC9Q6ZRR7 1453 aa12.6□□□□□ -0.39
TRIM23-201ENST00000231524 DCAF11Q8TEB1 546 aa12.59□□□□□ -0.39
TRIM23-201ENST00000231524 UACAQ9BZF9 1416 aa12.59□□□□□ -0.39
TRIM23-201ENST00000231524 GOLGA6L3A6NEY3 463 aa12.59□□□□□ -0.39
TRIM23-201ENST00000231524 PKNOX2Q96KN3 472 aa12.59□□□□□ -0.39
TRIM23-201ENST00000231524 SKAP1Q86WV1 359 aa12.59□□□□□ -0.39
TRIM23-201ENST00000231524 NLRP13Q86W25 1043 aa12.58□□□□□ -0.4
TRIM23-201ENST00000231524 MAPKBP1O60336 1514 aa12.58□□□□□ -0.4
TRIM23-201ENST00000231524 JPH4Q96JJ6 628 aa12.58□□□□□ -0.4
TRIM23-201ENST00000231524 SMG6Q86US8 1419 aaKnown RBP12.57□□□□□ -0.4
TRIM23-201ENST00000231524 KNSTRNQ9Y448 316 aa12.56□□□□□ -0.4
TRIM23-201ENST00000231524 KTN1Q86UP2 1357 aaKnown RBP12.56□□□□□ -0.4
TRIM23-201ENST00000231524 PKD2Q13563 968 aa12.56□□□□□ -0.4
TRIM23-201ENST00000231524 NEUROD2Q15784 382 aa12.56□□□□□ -0.4
TRIM23-201ENST00000231524 CDCA7LQ96GN5 454 aa12.56□□□□□ -0.4
TRIM23-201ENST00000231524 MYBBP1AQ9BQG0 1328 aaKnown RBP12.55□□□□□ -0.4
TRIM23-201ENST00000231524 CENPQQ7L2Z9 268 aaPredicted RBP12.55□□□□□ -0.4
TRIM23-201ENST00000231524 PRXQ9BXM0 1461 aa12.55□□□□□ -0.4
TRIM23-201ENST00000231524 FAM43AQ8N2R8 423 aa12.55□□□□□ -0.4
TRIM23-201ENST00000231524 ST20-MTHFSA0A0A6YYL1 179 aa12.54□□□□□ -0.4
TRIM23-201ENST00000231524 PNISRQ8TF01 805 aaKnown RBP12.54□□□□□ -0.4
TRIM23-201ENST00000231524 NCLP19338 710 aaKnown RBP12.53□□□□□ -0.4
TRIM23-201ENST00000231524 NBPF8Q3BBV2 869 aa12.53□□□□□ -0.4
TRIM23-201ENST00000231524 FGD6Q6ZV73 1430 aa12.52□□□□□ -0.4
TRIM23-201ENST00000231524 MYH16Q9H6N6 1097 aa12.52□□□□□ -0.41
TRIM23-201ENST00000231524 KIF15Q9NS87 1388 aa12.52□□□□□ -0.41
TRIM23-201ENST00000231524 USP47Q96K76 1375 aa12.51□□□□□ -0.41
TRIM23-201ENST00000231524 CARMIL2Q6F5E8 1435 aa12.51□□□□□ -0.41
TRIM23-201ENST00000231524 ARID3AQ99856 593 aa12.51□□□□□ -0.41
TRIM23-201ENST00000231524 GOLGA6L22H0YM25 854 aa12.5□□□□□ -0.41
TRIM23-201ENST00000231524 CHGAP10645 457 aaKnown RBP12.5□□□□□ -0.41
TRIM23-201ENST00000231524 DNMBPQ6XZF7 1577 aa12.5□□□□□ -0.41
TRIM23-201ENST00000231524 ERICH3Q5RHP9 1530 aa12.5□□□□□ -0.41
TRIM23-201ENST00000231524 MRC2Q9UBG0 1479 aa12.49□□□□□ -0.41
TRIM23-201ENST00000231524 GOLGA2Q08379 1002 aa12.48□□□□□ -0.41
TRIM23-201ENST00000231524 ROCK2O75116 1388 aaKnown RBP12.48□□□□□ -0.41
TRIM23-201ENST00000231524 HSCBQ8IWL3 235 aa12.48□□□□□ -0.41
TRIM23-201ENST00000231524 HSP90AB1P08238 724 aaKnown RBP12.47□□□□□ -0.41
TRIM23-201ENST00000231524 LAMC3Q9Y6N6 1575 aa12.46□□□□□ -0.41
TRIM23-201ENST00000231524 MSNP26038 577 aaKnown RBP12.46□□□□□ -0.41
TRIM23-201ENST00000231524 SENP3Q9H4L4 574 aaPredicted RBP12.46□□□□□ -0.41
TRIM23-201ENST00000231524 URB2Q14146 1524 aaKnown RBP12.46□□□□□ -0.42
TRIM23-201ENST00000231524 PLPPR3Q6T4P5 718 aa12.46□□□□□ -0.42
TRIM23-201ENST00000231524 FTSJ3Q8IY81 847 aaKnown RBP12.45□□□□□ -0.42
TRIM23-201ENST00000231524 POGKQ9P215 609 aa12.45□□□□□ -0.42
TRIM23-201ENST00000231524 TMF1P82094 1093 aa12.45□□□□□ -0.42
TRIM23-201ENST00000231524 CCDC146Q8IYE0 955 aa12.45□□□□□ -0.42
TRIM23-201ENST00000231524 GRIN2BQ13224 1484 aa12.44□□□□□ -0.42
TRIM23-201ENST00000231524 MFAP1P55081 439 aaKnown RBP12.44□□□□□ -0.42
TRIM23-201ENST00000231524 TIAM1Q13009 1591 aa12.44□□□□□ -0.42
TRIM23-201ENST00000231524 WASHC2CQ9Y4E1 1318 aa12.43□□□□□ -0.42
TRIM23-201ENST00000231524 DNTTIP2Q5QJE6 756 aaKnown RBP12.43□□□□□ -0.42
TRIM23-201ENST00000231524 HFM1A2PYH4 1435 aa12.43□□□□□ -0.42
TRIM23-201ENST00000231524 PTMAP06454 111 aaKnown RBP12.42□□□□□ -0.42
TRIM23-201ENST00000231524 TNNT2P45379 298 aaPredicted RBP12.42□□□□□ -0.42
TRIM23-201ENST00000231524 ABCA10Q8WWZ4 1543 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms