RNA–Protein interactions for RNA: ENST00000231524.13

TRIM23-201, Transcript of tripartite motif containing 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM23, Length 4,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-201ENST00000231524 NISCHQ9Y2I1 1504 aa17.53■□□□□ 0.4
TRIM23-201ENST00000231524 DCAF8L2P0C7V8 631 aa16.43■□□□□ 0.22
TRIM23-201ENST00000231524 SUPT5HO00267 1087 aaKnown RBP16.28■□□□□ 0.2
TRIM23-201ENST00000231524 SHROOM4Q9ULL8 1493 aa16.07■□□□□ 0.16
TRIM23-201ENST00000231524 PCGF6Q9BYE7 350 aa16.03■□□□□ 0.16
TRIM23-201ENST00000231524 HRCP23327 699 aa15.9■□□□□ 0.14
TRIM23-201ENST00000231524 PELP1Q8IZL8 1130 aaKnown RBP15.76■□□□□ 0.11
TRIM23-201ENST00000231524 PPARGC1BQ86YN6 1023 aaKnown RBP15.71■□□□□ 0.1
TRIM23-201ENST00000231524 EHMT2Q96KQ7 1210 aa15.42■□□□□ 0.06
TRIM23-201ENST00000231524 ZEB1P37275 1124 aaPredicted RBP15.36■□□□□ 0.05
TRIM23-201ENST00000231524 CHIC1Q5VXU3 224 aa15.36■□□□□ 0.05
TRIM23-201ENST00000231524 TRIM26Q12899 539 aaPredicted RBP15.28■□□□□ 0.04
TRIM23-201ENST00000231524 MYT1Q01538 1121 aa15.27■□□□□ 0.04
TRIM23-201ENST00000231524 LOC105371045A0A1W2PR82 267 aa15.26■□□□□ 0.03
TRIM23-201ENST00000231524 FAM9AQ8IZU1 332 aaPredicted RBP15.21■□□□□ 0.03
TRIM23-201ENST00000231524 CENPBP07199 599 aaPredicted RBP15.2■□□□□ 0.02
TRIM23-201ENST00000231524 CCER1Q8TC90 406 aaPredicted RBP15.07■□□□□ 0
TRIM23-201ENST00000231524 TTBK1Q5TCY1 1321 aaPredicted RBP15□□□□□ -0.01
TRIM23-201ENST00000231524 YTHDC1Q96MU7 727 aaKnown RBP14.98□□□□□ -0.01
TRIM23-201ENST00000231524 SCAF1Q9H7N4 1312 aaKnown RBP14.98□□□□□ -0.01
TRIM23-201ENST00000231524 TRIM41Q8WV44 630 aa14.95□□□□□ -0.02
TRIM23-201ENST00000231524 GTF3C3Q9Y5Q9 886 aa14.9□□□□□ -0.02
TRIM23-201ENST00000231524 ABCC9O60706 1549 aa14.89□□□□□ -0.03
TRIM23-201ENST00000231524 MYO15BQ96JP2 1530 aa14.85□□□□□ -0.03
TRIM23-201ENST00000231524 ACIN1Q9UKV3 1341 aaKnown RBP14.83□□□□□ -0.04
TRIM23-201ENST00000231524 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.81□□□□□ -0.04
TRIM23-201ENST00000231524 DIEXFQ68CQ4 756 aaKnown RBP14.8□□□□□ -0.04
TRIM23-201ENST00000231524 NEUROD1Q13562 356 aa14.72□□□□□ -0.05
TRIM23-201ENST00000231524 DCAF1Q9Y4B6 1507 aa14.72□□□□□ -0.05
TRIM23-201ENST00000231524 CCDC180Q9P1Z9 1646 aa14.65□□□□□ -0.06
TRIM23-201ENST00000231524 ZCCHC6Q5VYS8 1495 aaKnown RBP14.6□□□□□ -0.07
TRIM23-201ENST00000231524 APLP2Q06481 763 aa14.52□□□□□ -0.09
TRIM23-201ENST00000231524 PABPN1Q86U42 306 aaKnown RBP eCLIP14.51□□□□□ -0.09
TRIM23-201ENST00000231524 UBTFP17480 764 aaKnown RBP14.44□□□□□ -0.1
TRIM23-201ENST00000231524 ZNF316A6NFI3 1004 aaPredicted RBP14.41□□□□□ -0.1
TRIM23-201ENST00000231524 ERICH6Q7L0X2 663 aa14.41□□□□□ -0.1
TRIM23-201ENST00000231524 HNRNPUL2Q1KMD3 747 aaKnown RBP14.4□□□□□ -0.1
TRIM23-201ENST00000231524 RANGAP1P46060 587 aaPredicted RBP14.39□□□□□ -0.11
TRIM23-201ENST00000231524 SCRIBQ14160 1630 aa14.35□□□□□ -0.11
TRIM23-201ENST00000231524 NEFLP07196 543 aa14.32□□□□□ -0.12
TRIM23-201ENST00000231524 BCANQ96GW7 911 aa14.25□□□□□ -0.13
TRIM23-201ENST00000231524 MIER1Q8N108 512 aa14.23□□□□□ -0.13
TRIM23-201ENST00000231524 ITGAEP38570 1179 aa14.06□□□□□ -0.16
TRIM23-201ENST00000231524 ANP32EQ9BTT0 268 aa14.04□□□□□ -0.16
TRIM23-201ENST00000231524 RB1CC1Q8TDY2 1594 aa14.01□□□□□ -0.17
TRIM23-201ENST00000231524 BCL11AQ9H165 835 aa14□□□□□ -0.17
TRIM23-201ENST00000231524 CLSPNQ9HAW4 1339 aa13.99□□□□□ -0.17
TRIM23-201ENST00000231524 NACADO15069 1562 aa13.99□□□□□ -0.17
TRIM23-201ENST00000231524 FKBP8Q14318 412 aa13.97□□□□□ -0.17
TRIM23-201ENST00000231524 SUPT16HQ9Y5B9 1047 aaKnown RBP13.94□□□□□ -0.18
TRIM23-201ENST00000231524 RSF1Q96T23 1441 aaPredicted RBP13.89□□□□□ -0.19
TRIM23-201ENST00000231524 ATP1B4Q9UN42 357 aaPredicted RBP13.88□□□□□ -0.19
TRIM23-201ENST00000231524 CECR2Q9BXF3 1484 aa13.86□□□□□ -0.19
TRIM23-201ENST00000231524 CSRNP3Q8WYN3 585 aa13.86□□□□□ -0.19
TRIM23-201ENST00000231524 CDK11AQ9UQ88 783 aaPredicted RBP13.85□□□□□ -0.19
TRIM23-201ENST00000231524 TSHZ2Q9NRE2 1034 aa13.82□□□□□ -0.2
TRIM23-201ENST00000231524 ANP32CO43423 234 aa13.77□□□□□ -0.21
TRIM23-201ENST00000231524 RTL5Q5HYW3 569 aaPredicted RBP13.77□□□□□ -0.21
TRIM23-201ENST00000231524 TRIM52Q96A61 297 aa13.77□□□□□ -0.21
TRIM23-201ENST00000231524 DDX10Q13206 875 aaKnown RBP13.76□□□□□ -0.21
TRIM23-201ENST00000231524 CEP162Q5TB80 1403 aa13.72□□□□□ -0.21
TRIM23-201ENST00000231524 CNGB1Q14028 1251 aaPredicted RBP13.7□□□□□ -0.22
TRIM23-201ENST00000231524 RBM19Q9Y4C8 960 aaKnown RBP13.67□□□□□ -0.22
TRIM23-201ENST00000231524 MROH2BQ7Z745 1585 aa13.67□□□□□ -0.22
TRIM23-201ENST00000231524 IRX6P78412 446 aaPredicted RBP13.66□□□□□ -0.22
TRIM23-201ENST00000231524 FAM50AQ14320 339 aaKnown RBP13.64□□□□□ -0.23
TRIM23-201ENST00000231524 NBR1Q14596 966 aa13.64□□□□□ -0.23
TRIM23-201ENST00000231524 HIRIP3Q9BW71 556 aaPredicted RBP13.62□□□□□ -0.23
TRIM23-201ENST00000231524 HNRNPUQ00839 825 aaKnown RBP eCLIP13.61□□□□□ -0.23
TRIM23-201ENST00000231524 BAZ1AQ9NRL2 1556 aaPredicted RBP13.6□□□□□ -0.23
TRIM23-201ENST00000231524 POLR3GLQ9BT43 218 aa13.59□□□□□ -0.23
TRIM23-201ENST00000231524 MYT1LQ9UL68 1186 aa13.58□□□□□ -0.24
TRIM23-201ENST00000231524 TNIKQ9UKE5 1360 aa13.57□□□□□ -0.24
TRIM23-201ENST00000231524 DAXXQ9UER7 740 aaPredicted RBP13.53□□□□□ -0.24
TRIM23-201ENST00000231524 KCNH8Q96L42 1107 aa13.53□□□□□ -0.24
TRIM23-201ENST00000231524 BAZ1BQ9UIG0 1483 aaKnown RBP13.52□□□□□ -0.24
TRIM23-201ENST00000231524 ANP32AP39687 249 aaKnown RBP13.52□□□□□ -0.25
TRIM23-201ENST00000231524 WIZO95785 1651 aa13.52□□□□□ -0.25
TRIM23-201ENST00000231524 CLIP1P30622 1438 aa13.51□□□□□ -0.25
TRIM23-201ENST00000231524 DEKP35659 375 aaKnown RBP13.47□□□□□ -0.25
TRIM23-201ENST00000231524 NPM2Q86SE8 214 aaKnown RBP13.47□□□□□ -0.25
TRIM23-201ENST00000231524 EIF5BO60841 1220 aaKnown RBP13.47□□□□□ -0.25
TRIM23-201ENST00000231524 SOGA1O94964 1423 aa13.46□□□□□ -0.26
TRIM23-201ENST00000231524 FAM9BQ8IZU0 186 aa13.44□□□□□ -0.26
TRIM23-201ENST00000231524 GOLGA3Q08378 1498 aa13.43□□□□□ -0.26
TRIM23-201ENST00000231524 P3H3Q8IVL6 736 aa13.42□□□□□ -0.26
TRIM23-201ENST00000231524 ZBTB47Q9UFB7 747 aaPredicted RBP13.42□□□□□ -0.26
TRIM23-201ENST00000231524 CCDC88BA6NC98 1476 aa13.42□□□□□ -0.26
TRIM23-201ENST00000231524 WRNQ14191 1432 aaPredicted RBP eCLIP13.41□□□□□ -0.26
TRIM23-201ENST00000231524 RTN4Q9NQC3 1192 aaKnown RBP13.4□□□□□ -0.26
TRIM23-201ENST00000231524 SIN3AQ96ST3 1273 aa13.39□□□□□ -0.27
TRIM23-201ENST00000231524 EEA1Q15075 1411 aa13.39□□□□□ -0.27
TRIM23-201ENST00000231524 FBLN2P98095 1184 aa13.38□□□□□ -0.27
TRIM23-201ENST00000231524 TONSLQ96HA7 1378 aa13.37□□□□□ -0.27
TRIM23-201ENST00000231524 CCDC136Q96JN2 1154 aa13.36□□□□□ -0.27
TRIM23-201ENST00000231524 B4GALNT3Q6L9W6 998 aa13.35□□□□□ -0.27
TRIM23-201ENST00000231524 NOP58Q9Y2X3 529 aaKnown RBP13.35□□□□□ -0.27
TRIM23-201ENST00000231524 ABCC8Q09428 1581 aa13.34□□□□□ -0.27
TRIM23-201ENST00000231524 SMARCA4P51532 1647 aa13.34□□□□□ -0.27
TRIM23-201ENST00000231524 PPP4R2Q9NY27 417 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 202.1 ms