RNA–Protein interactions for RNA: ENSMUST00000187938.6

Fn1-211, Transcript of Fibronectin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Fn1, Length 7,965 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1-211ENSMUST00000187938 Ap3b2Q9JME5 1082 aa16.09■□□□□ 0.17
Fn1-211ENSMUST00000187938 Birc3O08863 600 aa16.09■□□□□ 0.17
Fn1-211ENSMUST00000187938 CanxP35564 591 aaKnown RBP16.08■□□□□ 0.16
Fn1-211ENSMUST00000187938 Ppm1gQ61074 542 aa16.08■□□□□ 0.16
Fn1-211ENSMUST00000187938 Ncbp3Q8BZR9 615 aaKnown RBP16.08■□□□□ 0.16
Fn1-211ENSMUST00000187938 Mtus2Q3UHD3 1353 aa16.07■□□□□ 0.16
Fn1-211ENSMUST00000187938 Dhx16G3X8X0 1044 aaKnown RBP16.07■□□□□ 0.16
Fn1-211ENSMUST00000187938 Pde3bQ61409 1100 aa16.07■□□□□ 0.16
Fn1-211ENSMUST00000187938 Mical1Q8VDP3 1048 aa16.07■□□□□ 0.16
Fn1-211ENSMUST00000187938 Adam1bQ8R534 806 aa16.07■□□□□ 0.16
Fn1-211ENSMUST00000187938 AcrbpQ3V140 540 aa16.06■□□□□ 0.16
Fn1-211ENSMUST00000187938 Pcmtd1P59913 357 aa16.06■□□□□ 0.16
Fn1-211ENSMUST00000187938 Gm973E9Q295 1059 aa16.06■□□□□ 0.16
Fn1-211ENSMUST00000187938 Spag9Q58A65 1321 aaKnown RBP16.06■□□□□ 0.16
Fn1-211ENSMUST00000187938 Ccdc18Q640L5 1455 aa16.04■□□□□ 0.16
Fn1-211ENSMUST00000187938 ArsiQ32KI9 573 aa16.04■□□□□ 0.16
Fn1-211ENSMUST00000187938 Rsph4aQ8BYM7 716 aa16.04■□□□□ 0.16
Fn1-211ENSMUST00000187938 BccipQ9CWI3 316 aa16.03■□□□□ 0.16
Fn1-211ENSMUST00000187938 Ddx11Q6AXC6 880 aa16.03■□□□□ 0.16
Fn1-211ENSMUST00000187938 HnrnpuQ8VEK3 800 aaKnown RBP16.03■□□□□ 0.16
Fn1-211ENSMUST00000187938 Klf15Q9EPW2 415 aa16.03■□□□□ 0.16
Fn1-211ENSMUST00000187938 Cep164Q5DU05 1446 aa16.02■□□□□ 0.16
Fn1-211ENSMUST00000187938 Gm38655A0A286YDK6 273 aa16.02■□□□□ 0.16
Fn1-211ENSMUST00000187938 Setd5Q5XJV7 1441 aa16.02■□□□□ 0.15
Fn1-211ENSMUST00000187938 Lemd3Q9WU40 921 aa16■□□□□ 0.15
Fn1-211ENSMUST00000187938 MycnP03966 462 aaKnown RBP15.99■□□□□ 0.15
Fn1-211ENSMUST00000187938 Wdr43Q6ZQL4 677 aaKnown RBP15.99■□□□□ 0.15
Fn1-211ENSMUST00000187938 Ccdc47Q9D024 483 aaKnown RBP15.99■□□□□ 0.15
Fn1-211ENSMUST00000187938 Rsf1E9PWW9 1441 aaKnown RBP15.99■□□□□ 0.15
Fn1-211ENSMUST00000187938 Ofd1Q80Z25 1017 aa15.98■□□□□ 0.15
Fn1-211ENSMUST00000187938 Eva1cP58659 440 aa15.97■□□□□ 0.15
Fn1-211ENSMUST00000187938 Ccdc43Q9CR29 222 aaKnown RBP15.97■□□□□ 0.15
Fn1-211ENSMUST00000187938 KnstrnQ9D9Z1 312 aaKnown RBP15.97■□□□□ 0.15
Fn1-211ENSMUST00000187938 CgnP59242 1191 aa15.96■□□□□ 0.15
Fn1-211ENSMUST00000187938 Dbr1Q923B1 550 aa15.96■□□□□ 0.15
Fn1-211ENSMUST00000187938 Sugp2Q8CH09 1067 aa15.96■□□□□ 0.15
Fn1-211ENSMUST00000187938 Spryd3E9Q9B3 442 aa15.96■□□□□ 0.14
Fn1-211ENSMUST00000187938 Krt82Q99M74 516 aa15.95■□□□□ 0.14
Fn1-211ENSMUST00000187938 Brpf1B2RRD7 1212 aa15.95■□□□□ 0.14
Fn1-211ENSMUST00000187938 Plagl1Q9JLQ4 704 aa15.94■□□□□ 0.14
Fn1-211ENSMUST00000187938 Tpd52l1O54818 204 aa15.94■□□□□ 0.14
Fn1-211ENSMUST00000187938 Senp3Q9EP97 568 aaKnown RBP15.93■□□□□ 0.14
Fn1-211ENSMUST00000187938 Tpm4Q6IRU2 248 aa15.93■□□□□ 0.14
Fn1-211ENSMUST00000187938 Gm21969J3QJZ1 289 aa15.91■□□□□ 0.14
Fn1-211ENSMUST00000187938 R3hcc1Q8BSI6 488 aa15.91■□□□□ 0.14
Fn1-211ENSMUST00000187938 Tmco5bQ80X59 307 aa15.9■□□□□ 0.14
Fn1-211ENSMUST00000187938 Htatsf1Q8BGC0 757 aa15.9■□□□□ 0.14
Fn1-211ENSMUST00000187938 CrebrfQ8CDG5 640 aaKnown RBP15.9■□□□□ 0.14
Fn1-211ENSMUST00000187938 Pibf1E9Q6K3 756 aa15.9■□□□□ 0.14
Fn1-211ENSMUST00000187938 Calcoco2A2A6M5 331 aa15.89■□□□□ 0.14
Fn1-211ENSMUST00000187938 Cyb5rlB1AS42 316 aa15.89■□□□□ 0.13
Fn1-211ENSMUST00000187938 AppP12023 770 aa15.89■□□□□ 0.13
Fn1-211ENSMUST00000187938 Skap1Q3UUV5 355 aa15.89■□□□□ 0.13
Fn1-211ENSMUST00000187938 Gtf2e1Q9D0D5 440 aa15.89■□□□□ 0.13
Fn1-211ENSMUST00000187938 Sirt1Q923E4 737 aa15.88■□□□□ 0.13
Fn1-211ENSMUST00000187938 Cwc22Q8C5N3 908 aaKnown RBP15.87■□□□□ 0.13
Fn1-211ENSMUST00000187938 Atf3Q60765 181 aa15.87■□□□□ 0.13
Fn1-211ENSMUST00000187938 Rbm5Q91YE7 815 aaKnown RBP15.86■□□□□ 0.13
Fn1-211ENSMUST00000187938 Tpm2P58774 284 aa15.85■□□□□ 0.13
Fn1-211ENSMUST00000187938 Smc4Q8CG47 1286 aa15.85■□□□□ 0.13
Fn1-211ENSMUST00000187938 Dmrt2Q8BG36 561 aa15.85■□□□□ 0.13
Fn1-211ENSMUST00000187938 Cabp4Q8VHC5 271 aa15.84■□□□□ 0.13
Fn1-211ENSMUST00000187938 Tpm3P21107 285 aaKnown RBP15.84■□□□□ 0.13
Fn1-211ENSMUST00000187938 Ftsj3Q9DBE9 838 aaKnown RBP15.84■□□□□ 0.13
Fn1-211ENSMUST00000187938 Ccdc96Q9CR92 584 aa15.84■□□□□ 0.13
Fn1-211ENSMUST00000187938 U2af1Q9D883 239 aaKnown RBP15.82■□□□□ 0.12
Fn1-211ENSMUST00000187938 Ccp110Q7TSH4 1004 aa15.82■□□□□ 0.12
Fn1-211ENSMUST00000187938 Arid4aF8VPQ2 1261 aaKnown RBP15.81■□□□□ 0.12
Fn1-211ENSMUST00000187938 SetQ9EQU5 289 aaKnown RBP15.81■□□□□ 0.12
Fn1-211ENSMUST00000187938 Taok2Q6ZQ29 1240 aa15.81■□□□□ 0.12
Fn1-211ENSMUST00000187938 Chmp7Q8R1T1 451 aa15.81■□□□□ 0.12
Fn1-211ENSMUST00000187938 Sytl4Q9R0Q1 673 aa15.81■□□□□ 0.12
Fn1-211ENSMUST00000187938 Znf710Q3U288 666 aa15.81■□□□□ 0.12
Fn1-211ENSMUST00000187938 Fhad1A6PWD2 1420 aa15.81■□□□□ 0.12
Fn1-211ENSMUST00000187938 1700123L14RikQ3V2K7 440 aa15.8■□□□□ 0.12
Fn1-211ENSMUST00000187938 Slc4a10Q5DTL9 1118 aa15.8■□□□□ 0.12
Fn1-211ENSMUST00000187938 Hdgfl1Q2VPR5 283 aa15.79■□□□□ 0.12
Fn1-211ENSMUST00000187938 Ccer1Q9CQL2 403 aa15.79■□□□□ 0.12
Fn1-211ENSMUST00000187938 Ppp4r3bQ922R5 820 aa15.79■□□□□ 0.12
Fn1-211ENSMUST00000187938 Ifit1bl1D3Z6F0 470 aa15.78■□□□□ 0.12
Fn1-211ENSMUST00000187938 Map4P27546 1125 aaKnown RBP15.78■□□□□ 0.12
Fn1-211ENSMUST00000187938 UvssaQ9D479 717 aa15.78■□□□□ 0.12
Fn1-211ENSMUST00000187938 Zpr1Q62384 459 aa15.78■□□□□ 0.12
Fn1-211ENSMUST00000187938 Fyb1O35601 819 aa15.77■□□□□ 0.12
Fn1-211ENSMUST00000187938 AU015836B2RUM3 263 aa15.77■□□□□ 0.12
Fn1-211ENSMUST00000187938 Pabpn1Q8CCS6 302 aaKnown RBP15.77■□□□□ 0.11
Fn1-211ENSMUST00000187938 Znf330Q922H9 316 aa15.76■□□□□ 0.11
Fn1-211ENSMUST00000187938 Cald1E9QA15 768 aaKnown RBP15.75■□□□□ 0.11
Fn1-211ENSMUST00000187938 March6Q6ZQ89 909 aa15.75■□□□□ 0.11
Fn1-211ENSMUST00000187938 Ddx54Q8K4L0 874 aaKnown RBP15.74■□□□□ 0.11
Fn1-211ENSMUST00000187938 Nap1l2P51860 460 aa15.74■□□□□ 0.11
Fn1-211ENSMUST00000187938 Erich6bQ9D4S6 220 aa15.73■□□□□ 0.11
Fn1-211ENSMUST00000187938 Kif3bQ61771 747 aa15.73■□□□□ 0.11
Fn1-211ENSMUST00000187938 Cnksr2Q80YA9 1032 aa15.73■□□□□ 0.11
Fn1-211ENSMUST00000187938 Arid3aQ62431 601 aa15.73■□□□□ 0.11
Fn1-211ENSMUST00000187938 Rb1cc1Q9ESK9 1588 aa15.72■□□□□ 0.11
Fn1-211ENSMUST00000187938 Utp14aQ640M1 767 aaKnown RBP15.72■□□□□ 0.11
Fn1-211ENSMUST00000187938 BcanQ61361 883 aa15.72■□□□□ 0.11
Fn1-211ENSMUST00000187938 B4galnt3Q6L8S8 986 aa15.72■□□□□ 0.11
Fn1-211ENSMUST00000187938 Kif7B7ZNG0 1348 aa15.71■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms