RNA–Protein interactions for RNA: ENSMUST00000187938.6

Fn1-211, Transcript of Fibronectin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Fn1, Length 7,965 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1-211ENSMUST00000187938 Rhox8Q6VSS7 320 aa22.48■■□□□ 1.19
Fn1-211ENSMUST00000187938 Ube2uB1AUC4 352 aa20.58■□□□□ 0.88
Fn1-211ENSMUST00000187938 Zeb1Q64318 1117 aa20.32■□□□□ 0.84
Fn1-211ENSMUST00000187938 Esf1Q3V1V3 845 aaKnown RBP20.29■□□□□ 0.84
Fn1-211ENSMUST00000187938 Cngb1E1AZ71 1325 aa19.98■□□□□ 0.79
Fn1-211ENSMUST00000187938 Pelp1Q9DBD5 1123 aaKnown RBP19.9■□□□□ 0.78
Fn1-211ENSMUST00000187938 Npm2Q80W85 207 aa19.85■□□□□ 0.77
Fn1-211ENSMUST00000187938 Wdr66E9Q743 1299 aa19.74■□□□□ 0.75
Fn1-211ENSMUST00000187938 Ehmt2Q9Z148 1263 aaKnown RBP19.72■□□□□ 0.75
Fn1-211ENSMUST00000187938 Las1lA2BE28 776 aaKnown RBP19.7■□□□□ 0.74
Fn1-211ENSMUST00000187938 Ccdc136Q3TVA9 1136 aa19.56■□□□□ 0.72
Fn1-211ENSMUST00000187938 Rpgrip1Q9EPQ2 1331 aa19.5■□□□□ 0.71
Fn1-211ENSMUST00000187938 Myt1lP97500 1187 aa19.5■□□□□ 0.71
Fn1-211ENSMUST00000187938 Gab3Q8BSM5 595 aa19.42■□□□□ 0.7
Fn1-211ENSMUST00000187938 Amer1Q7TS75 1132 aa19.15■□□□□ 0.66
Fn1-211ENSMUST00000187938 Os9Q8K2C7 672 aa19.03■□□□□ 0.64
Fn1-211ENSMUST00000187938 Trim41Q5NCC3 630 aa19■□□□□ 0.63
Fn1-211ENSMUST00000187938 Slc24a1Q91WD8 1130 aa18.97■□□□□ 0.63
Fn1-211ENSMUST00000187938 Il27Q8K3I6 234 aa18.93■□□□□ 0.62
Fn1-211ENSMUST00000187938 Gm13697A2AK42 830 aa18.86■□□□□ 0.61
Fn1-211ENSMUST00000187938 4930567H17RikQ3V0K5 233 aa18.81■□□□□ 0.6
Fn1-211ENSMUST00000187938 HrcG5E8J6 738 aa18.77■□□□□ 0.6
Fn1-211ENSMUST00000187938 Plppr3Q7TPB0 716 aa18.7■□□□□ 0.58
Fn1-211ENSMUST00000187938 UbtfP25976 765 aaKnown RBP18.61■□□□□ 0.57
Fn1-211ENSMUST00000187938 Anp32bQ9EST5 272 aaKnown RBP18.6■□□□□ 0.57
Fn1-211ENSMUST00000187938 Neurod1Q60867 357 aa18.58■□□□□ 0.57
Fn1-211ENSMUST00000187938 Ifnlr1Q8CGK5 535 aa18.58■□□□□ 0.56
Fn1-211ENSMUST00000187938 Stra8P70278 393 aa18.56■□□□□ 0.56
Fn1-211ENSMUST00000187938 Ttbk1Q6PCN3 1308 aa18.53■□□□□ 0.56
Fn1-211ENSMUST00000187938 Chic1Q8CBW7 227 aa18.53■□□□□ 0.56
Fn1-211ENSMUST00000187938 DiexfQ8BTT6 772 aaKnown RBP18.52■□□□□ 0.56
Fn1-211ENSMUST00000187938 Zbtb7cQ8VCZ7 619 aa18.42■□□□□ 0.54
Fn1-211ENSMUST00000187938 Ap3b1Q9Z1T1 1105 aa18.41■□□□□ 0.54
Fn1-211ENSMUST00000187938 Gm13695A2AK44 830 aa18.41■□□□□ 0.54
Fn1-211ENSMUST00000187938 Atp1b4Q99ME6 356 aa18.4■□□□□ 0.54
Fn1-211ENSMUST00000187938 NclP09405 707 aaKnown RBP18.39■□□□□ 0.53
Fn1-211ENSMUST00000187938 Fam50aQ9WV03 339 aaKnown RBP18.37■□□□□ 0.53
Fn1-211ENSMUST00000187938 NeflP08551 543 aa18.36■□□□□ 0.53
Fn1-211ENSMUST00000187938 NrdcQ8BHG1 1161 aa18.35■□□□□ 0.53
Fn1-211ENSMUST00000187938 Hnrnpul2Q00PI9 745 aaKnown RBP18.29■□□□□ 0.52
Fn1-211ENSMUST00000187938 4933416C03RikQ3V063 378 aa18.18■□□□□ 0.5
Fn1-211ENSMUST00000187938 Cdk11bP24788 784 aaKnown RBP18.15■□□□□ 0.5
Fn1-211ENSMUST00000187938 Eif5bQ05D44 1216 aaKnown RBP18.12■□□□□ 0.49
Fn1-211ENSMUST00000187938 Erich6D3Z6S9 713 aa18.1■□□□□ 0.49
Fn1-211ENSMUST00000187938 CenpbP27790 599 aa18.08■□□□□ 0.49
Fn1-211ENSMUST00000187938 Safb2Q80YR5 991 aaKnown RBP18.05■□□□□ 0.48
Fn1-211ENSMUST00000187938 Acin1Q9JIX8 1338 aaKnown RBP17.99■□□□□ 0.47
Fn1-211ENSMUST00000187938 Prdm10Q3UTQ7 1184 aa17.95■□□□□ 0.46
Fn1-211ENSMUST00000187938 Npm1Q61937 292 aaKnown RBP17.95■□□□□ 0.46
Fn1-211ENSMUST00000187938 NefmP08553 848 aa17.92■□□□□ 0.46
Fn1-211ENSMUST00000187938 Zbtb4Q5F293 982 aa17.89■□□□□ 0.45
Fn1-211ENSMUST00000187938 Nlrp6Q91WS2 869 aa17.85■□□□□ 0.45
Fn1-211ENSMUST00000187938 Fkbp15Q6P9Q6 1216 aaKnown RBP17.84■□□□□ 0.45
Fn1-211ENSMUST00000187938 Polr3glQ8R0C0 218 aa17.8■□□□□ 0.44
Fn1-211ENSMUST00000187938 Gm35339A0A140LHH9 1649 aa17.78■□□□□ 0.44
Fn1-211ENSMUST00000187938 Hdac5Q9Z2V6 1113 aa17.77■□□□□ 0.43
Fn1-211ENSMUST00000187938 Lmod2Q3UHZ5 550 aa17.65■□□□□ 0.42
Fn1-211ENSMUST00000187938 Znf326O88291 580 aa17.64■□□□□ 0.42
Fn1-211ENSMUST00000187938 Abcc9P70170 1546 aa17.64■□□□□ 0.41
Fn1-211ENSMUST00000187938 P3h3Q8CG70 732 aa17.56■□□□□ 0.4
Fn1-211ENSMUST00000187938 Rangap1P46061 589 aaKnown RBP17.54■□□□□ 0.4
Fn1-211ENSMUST00000187938 Zcchc6Q5BLK4 1491 aaKnown RBP17.53■□□□□ 0.4
Fn1-211ENSMUST00000187938 Hsp90aa1P07901 733 aaKnown RBP17.51■□□□□ 0.39
Fn1-211ENSMUST00000187938 MyclP10166 368 aa17.51■□□□□ 0.39
Fn1-211ENSMUST00000187938 Ppargc1bQ8VHJ7 1014 aa17.47■□□□□ 0.39
Fn1-211ENSMUST00000187938 NischQ80TM9 1593 aa17.45■□□□□ 0.38
Fn1-211ENSMUST00000187938 Tnnt3Q9QZ47 272 aa17.44■□□□□ 0.38
Fn1-211ENSMUST00000187938 CatipB9EKE5 520 aa17.42■□□□□ 0.38
Fn1-211ENSMUST00000187938 ArxO35085 564 aa17.39■□□□□ 0.38
Fn1-211ENSMUST00000187938 Irx6Q9ER75 438 aa17.35■□□□□ 0.37
Fn1-211ENSMUST00000187938 Ggt6Q6PDE7 497 aa17.34■□□□□ 0.37
Fn1-211ENSMUST00000187938 Ythdc1E9Q5K9 736 aaKnown RBP17.34■□□□□ 0.37
Fn1-211ENSMUST00000187938 TonslQ6NZL6 1363 aa17.3■□□□□ 0.36
Fn1-211ENSMUST00000187938 Rtn4Q99P72 1162 aaKnown RBP17.24■□□□□ 0.35
Fn1-211ENSMUST00000187938 Nop58Q6DFW4 536 aaKnown RBP17.22■□□□□ 0.35
Fn1-211ENSMUST00000187938 Fgd1P52734 960 aa17.22■□□□□ 0.35
Fn1-211ENSMUST00000187938 Clstn1Q9EPL2 979 aa17.21■□□□□ 0.35
Fn1-211ENSMUST00000187938 Ubl4bQ9CQ84 188 aa17.17■□□□□ 0.34
Fn1-211ENSMUST00000187938 DaxxO35613 739 aa17.14■□□□□ 0.33
Fn1-211ENSMUST00000187938 Plekhg3Q4VAC9 1341 aa17.13■□□□□ 0.33
Fn1-211ENSMUST00000187938 Upf2A2AT37 1269 aaKnown RBP17.11■□□□□ 0.33
Fn1-211ENSMUST00000187938 Ppm1fQ8CGA0 452 aa17.09■□□□□ 0.33
Fn1-211ENSMUST00000187938 NgefQ8CHT1 710 aa17.07■□□□□ 0.32
Fn1-211ENSMUST00000187938 Q8BT18 775 aa17.06■□□□□ 0.32
Fn1-211ENSMUST00000187938 Vsig10D3YX43 558 aa17.03■□□□□ 0.32
Fn1-211ENSMUST00000187938 Slc4a1apE9PX68 744 aa17.01■□□□□ 0.31
Fn1-211ENSMUST00000187938 Aplp2Q06335 707 aa16.98■□□□□ 0.31
Fn1-211ENSMUST00000187938 Trim26Q99PN3 545 aa16.95■□□□□ 0.3
Fn1-211ENSMUST00000187938 MlecQ6ZQI3 291 aaKnown RBP16.95■□□□□ 0.3
Fn1-211ENSMUST00000187938 Ccdc180J3QNE4 1664 aa16.93■□□□□ 0.3
Fn1-211ENSMUST00000187938 Ppp1r18Q8BQ30 594 aa16.92■□□□□ 0.3
Fn1-211ENSMUST00000187938 Csrnp3P59055 597 aa16.91■□□□□ 0.3
Fn1-211ENSMUST00000187938 IqubQ8CDK3 788 aa16.9■□□□□ 0.3
Fn1-211ENSMUST00000187938 Clstn2Q9ER65 966 aa16.89■□□□□ 0.29
Fn1-211ENSMUST00000187938 Lmod3E9QA62 571 aa16.89■□□□□ 0.29
Fn1-211ENSMUST00000187938 Rad21Q61550 635 aaKnown RBP16.89■□□□□ 0.29
Fn1-211ENSMUST00000187938 Ubap1lG3UW59 384 aa16.88■□□□□ 0.29
Fn1-211ENSMUST00000187938 Mapk8ip2Q9ERE9 830 aa16.86■□□□□ 0.29
Fn1-211ENSMUST00000187938 PnnO35691 725 aaKnown RBP16.85■□□□□ 0.29
Fn1-211ENSMUST00000187938 DekQ7TNV0 380 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms