RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Map4P27546 1125 aaKnown RBP15.7■□□□□ 0.1
Ssh1-202ENSMUST00000112298 Rundc1Q0VDN7 615 aa15.7■□□□□ 0.1
Ssh1-202ENSMUST00000112298 Speer4f1Q9D5Q6 258 aa15.69■□□□□ 0.1
Ssh1-202ENSMUST00000112298 Pkd2O35245 966 aa15.69■□□□□ 0.1
Ssh1-202ENSMUST00000112298 MsnP26041 577 aaKnown RBP15.69■□□□□ 0.1
Ssh1-202ENSMUST00000112298 Bcl11aQ9QYE3 773 aa15.69■□□□□ 0.1
Ssh1-202ENSMUST00000112298 Ipo9Q91YE6 1041 aa15.68■□□□□ 0.1
Ssh1-202ENSMUST00000112298 Kif27Q7M6Z4 1394 aa15.68■□□□□ 0.1
Ssh1-202ENSMUST00000112298 Zscan21Q07231 555 aa15.68■□□□□ 0.1
Ssh1-202ENSMUST00000112298 Cnga1P29974 684 aa15.68■□□□□ 0.1
Ssh1-202ENSMUST00000112298 Mak16Q8BGS0 296 aaKnown RBP15.67■□□□□ 0.1
Ssh1-202ENSMUST00000112298 Gtf2e1Q9D0D5 440 aa15.67■□□□□ 0.1
Ssh1-202ENSMUST00000112298 SafbD3YXK2 937 aaKnown RBP15.67■□□□□ 0.1
Ssh1-202ENSMUST00000112298 Clstn1Q9EPL2 979 aa15.67■□□□□ 0.1
Ssh1-202ENSMUST00000112298 Fyco1Q8VDC1 1437 aa15.65■□□□□ 0.1
Ssh1-202ENSMUST00000112298 Anapc15P60007 132 aa15.65■□□□□ 0.1
Ssh1-202ENSMUST00000112298 Ipo8Q7TMY7 1010 aa15.65■□□□□ 0.1
Ssh1-202ENSMUST00000112298 Rassf8Q8CJ96 419 aa15.65■□□□□ 0.1
Ssh1-202ENSMUST00000112298 R3hcc1Q8BSI6 488 aa15.63■□□□□ 0.09
Ssh1-202ENSMUST00000112298 Exoc6Q8R313 802 aa15.63■□□□□ 0.09
Ssh1-202ENSMUST00000112298 Pcmtd1P59913 357 aa15.63■□□□□ 0.09
Ssh1-202ENSMUST00000112298 Slc4a3P16283 1227 aa15.63■□□□□ 0.09
Ssh1-202ENSMUST00000112298 Smarce1O54941 411 aaKnown RBP15.62■□□□□ 0.09
Ssh1-202ENSMUST00000112298 Arhgap35Q91YM2 1499 aa15.61■□□□□ 0.09
Ssh1-202ENSMUST00000112298 Dnai2A2AC93 623 aa15.61■□□□□ 0.09
Ssh1-202ENSMUST00000112298 Tpm3-rs7D3Z2H9 248 aa15.6■□□□□ 0.09
Ssh1-202ENSMUST00000112298 Rrp12Q6P5B0 1295 aaKnown RBP15.6■□□□□ 0.09
Ssh1-202ENSMUST00000112298 Golga2Q921M4 999 aa15.6■□□□□ 0.09
Ssh1-202ENSMUST00000112298 Cep162Q6ZQ06 1403 aa15.6■□□□□ 0.09
Ssh1-202ENSMUST00000112298 RdxP26043 583 aaKnown RBP15.6■□□□□ 0.09
Ssh1-202ENSMUST00000112298 U2surpQ6NV83 1029 aaKnown RBP15.6■□□□□ 0.09
Ssh1-202ENSMUST00000112298 Iffo2Q8R2V2 512 aa15.6■□□□□ 0.09
Ssh1-202ENSMUST00000112298 4933402E13RikQ9D4D2 429 aa15.59■□□□□ 0.09
Ssh1-202ENSMUST00000112298 Cald1E9QA15 768 aaKnown RBP15.59■□□□□ 0.09
Ssh1-202ENSMUST00000112298 Fmn1Q05860 1466 aa15.58■□□□□ 0.08
Ssh1-202ENSMUST00000112298 Ifit1bl1D3Z6F0 470 aa15.58■□□□□ 0.08
Ssh1-202ENSMUST00000112298 U2af1Q9D883 239 aaKnown RBP15.58■□□□□ 0.08
Ssh1-202ENSMUST00000112298 MyclP10166 368 aa15.57■□□□□ 0.08
Ssh1-202ENSMUST00000112298 Nol10Q5RJG1 687 aaKnown RBP15.56■□□□□ 0.08
Ssh1-202ENSMUST00000112298 Znf316Q6PGE4 1016 aa15.56■□□□□ 0.08
Ssh1-202ENSMUST00000112298 Atp6v1dP57746 247 aa15.56■□□□□ 0.08
Ssh1-202ENSMUST00000112298 Mphosph9A6H5Y1 991 aa15.55■□□□□ 0.08
Ssh1-202ENSMUST00000112298 Spag9Q58A65 1321 aaKnown RBP15.55■□□□□ 0.08
Ssh1-202ENSMUST00000112298 Rock2P70336 1388 aa15.55■□□□□ 0.08
Ssh1-202ENSMUST00000112298 CntlnA2AM05 1397 aa15.54■□□□□ 0.08
Ssh1-202ENSMUST00000112298 Q3TQI7 289 aaKnown RBP15.54■□□□□ 0.08
Ssh1-202ENSMUST00000112298 MecomP14404 1042 aa15.54■□□□□ 0.08
Ssh1-202ENSMUST00000112298 Tmco5bQ80X59 307 aa15.54■□□□□ 0.08
Ssh1-202ENSMUST00000112298 Aebp1Q640N1 1128 aa15.53■□□□□ 0.08
Ssh1-202ENSMUST00000112298 Ddrgk1Q80WW9 315 aa15.53■□□□□ 0.08
Ssh1-202ENSMUST00000112298 Baz1bQ9Z277 1479 aa15.53■□□□□ 0.08
Ssh1-202ENSMUST00000112298 Mfap1aC0HKD8 439 aaKnown RBP15.53■□□□□ 0.08
Ssh1-202ENSMUST00000112298 Mfap1bC0HKD9 439 aaKnown RBP15.53■□□□□ 0.08
Ssh1-202ENSMUST00000112298 Ccar1Q8CH18 1146 aaKnown RBP15.53■□□□□ 0.08
Ssh1-202ENSMUST00000112298 Stard8Q8K031 1019 aa15.53■□□□□ 0.08
Ssh1-202ENSMUST00000112298 CgnP59242 1191 aa15.52■□□□□ 0.08
Ssh1-202ENSMUST00000112298 Dhx57Q6P5D3 1388 aaKnown RBP15.52■□□□□ 0.08
Ssh1-202ENSMUST00000112298 Cspp1B2RX88 1205 aa15.51■□□□□ 0.07
Ssh1-202ENSMUST00000112298 Trak1Q6PD31 939 aa15.51■□□□□ 0.07
Ssh1-202ENSMUST00000112298 SetQ9EQU5 289 aaKnown RBP15.51■□□□□ 0.07
Ssh1-202ENSMUST00000112298 Dcaf11Q91VU6 549 aa15.51■□□□□ 0.07
Ssh1-202ENSMUST00000112298 Cgnl1Q6AW69 1298 aa15.5■□□□□ 0.07
Ssh1-202ENSMUST00000112298 Cluap1Q8R3P7 413 aa15.48■□□□□ 0.07
Ssh1-202ENSMUST00000112298 Lemd3Q9WU40 921 aa15.47■□□□□ 0.07
Ssh1-202ENSMUST00000112298 Sin3aQ60520 1274 aaKnown RBP15.47■□□□□ 0.07
Ssh1-202ENSMUST00000112298 Stk26Q99JT2 416 aa15.47■□□□□ 0.07
Ssh1-202ENSMUST00000112298 Kiaa0754Q69ZZ9 979 aa15.47■□□□□ 0.07
Ssh1-202ENSMUST00000112298 Rsph4aQ8BYM7 716 aa15.47■□□□□ 0.07
Ssh1-202ENSMUST00000112298 Pds5bQ4VA53 1446 aaKnown RBP15.46■□□□□ 0.06
Ssh1-202ENSMUST00000112298 Becn1O88597 448 aa15.45■□□□□ 0.06
Ssh1-202ENSMUST00000112298 Cabp1Q9JLK7 227 aa15.45■□□□□ 0.06
Ssh1-202ENSMUST00000112298 Srcin1Q9QWI6 1250 aa15.45■□□□□ 0.06
Ssh1-202ENSMUST00000112298 Birc3O08863 600 aa15.44■□□□□ 0.06
Ssh1-202ENSMUST00000112298 HdgfP51859 237 aaKnown RBP15.44■□□□□ 0.06
Ssh1-202ENSMUST00000112298 Nup155Q99P88 1391 aaKnown RBP15.44■□□□□ 0.06
Ssh1-202ENSMUST00000112298 Rpap1Q80TE0 1409 aa15.44■□□□□ 0.06
Ssh1-202ENSMUST00000112298 Kdm5dQ62240 1548 aa15.43■□□□□ 0.06
Ssh1-202ENSMUST00000112298 Ksr2Q3UVC0 959 aa15.43■□□□□ 0.06
Ssh1-202ENSMUST00000112298 Ylpm1Q9R0I7 1386 aaKnown RBP15.43■□□□□ 0.06
Ssh1-202ENSMUST00000112298 Plekhh2Q8C115 1491 aa15.43■□□□□ 0.06
Ssh1-202ENSMUST00000112298 Trim30aP15533 496 aa15.42■□□□□ 0.06
Ssh1-202ENSMUST00000112298 Rsph3aQ3UFY4 516 aa15.42■□□□□ 0.06
Ssh1-202ENSMUST00000112298 AampJ3QN89 436 aa15.42■□□□□ 0.06
Ssh1-202ENSMUST00000112298 Ppp1r18Q8BQ30 594 aa15.42■□□□□ 0.06
Ssh1-202ENSMUST00000112298 Ccdc88bQ4QRL3 1481 aa15.42■□□□□ 0.06
Ssh1-202ENSMUST00000112298 Tpm3P21107 285 aaKnown RBP15.42■□□□□ 0.06
Ssh1-202ENSMUST00000112298 VgfQ0VGU4 617 aa15.42■□□□□ 0.06
Ssh1-202ENSMUST00000112298 Psme1P97371 249 aa15.41■□□□□ 0.06
Ssh1-202ENSMUST00000112298 Plin1Q8CGN5 517 aa15.41■□□□□ 0.06
Ssh1-202ENSMUST00000112298 Glipr1l2Q9CQ35 332 aa15.41■□□□□ 0.06
Ssh1-202ENSMUST00000112298 Znf330Q922H9 316 aa15.41■□□□□ 0.06
Ssh1-202ENSMUST00000112298 CenpjQ569L8 1344 aa15.41■□□□□ 0.06
Ssh1-202ENSMUST00000112298 GorabQ8BRM2 368 aa15.4■□□□□ 0.06
Ssh1-202ENSMUST00000112298 Map7d2A2AG50 781 aa15.4■□□□□ 0.06
Ssh1-202ENSMUST00000112298 CrbnQ8C7D2 445 aa15.4■□□□□ 0.06
Ssh1-202ENSMUST00000112298 Ccdc47Q9D024 483 aaKnown RBP15.39■□□□□ 0.05
Ssh1-202ENSMUST00000112298 Brpf1B2RRD7 1212 aa15.39■□□□□ 0.05
Ssh1-202ENSMUST00000112298 Tnnt1O88346 262 aa15.39■□□□□ 0.05
Ssh1-202ENSMUST00000112298 AknaQ80VW7 1404 aa15.38■□□□□ 0.05
Ssh1-202ENSMUST00000112298 CrebrfQ8CDG5 640 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms