RNA–Protein interactions for RNA: ENSMUST00000106612.7

Sox6-202, Transcript of Transcription factor SOX-6, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sox6, Length 8,193 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6-202ENSMUST00000106612 HnrnpuQ8VEK3 800 aaKnown RBP10.02□□□□□ -0.81
Sox6-202ENSMUST00000106612 MccE9PWI3 1003 aa10.02□□□□□ -0.81
Sox6-202ENSMUST00000106612 Sin3aQ60520 1274 aaKnown RBP10.02□□□□□ -0.81
Sox6-202ENSMUST00000106612 CftrP26361 1476 aa10.02□□□□□ -0.81
Sox6-202ENSMUST00000106612 Rapgef2Q8CHG7 1496 aa10.02□□□□□ -0.81
Sox6-202ENSMUST00000106612 Arhgap27A2AB59 869 aa10.01□□□□□ -0.81
Sox6-202ENSMUST00000106612 Erich6bQ9D4S6 220 aa10.01□□□□□ -0.81
Sox6-202ENSMUST00000106612 Armcx1Q9CX83 456 aa10.01□□□□□ -0.81
Sox6-202ENSMUST00000106612 Nolc1E9Q5C9 702 aaKnown RBP10.01□□□□□ -0.81
Sox6-202ENSMUST00000106612 Gtf3c3Q3TMP1 882 aa10.01□□□□□ -0.81
Sox6-202ENSMUST00000106612 Aebp1Q640N1 1128 aa10□□□□□ -0.81
Sox6-202ENSMUST00000106612 Rrp12Q6P5B0 1295 aaKnown RBP10□□□□□ -0.81
Sox6-202ENSMUST00000106612 Gm6268A2A3U9 297 aa10□□□□□ -0.81
Sox6-202ENSMUST00000106612 Sycp2Q9CUU3 1500 aa9.99□□□□□ -0.81
Sox6-202ENSMUST00000106612 Speer4f1Q9D5Q6 258 aa9.99□□□□□ -0.81
Sox6-202ENSMUST00000106612 Stag3O70576 1240 aa9.99□□□□□ -0.81
Sox6-202ENSMUST00000106612 UacaQ8CGB3 1411 aa9.99□□□□□ -0.81
Sox6-202ENSMUST00000106612 Synj1Q8CHC4 1574 aa9.99□□□□□ -0.81
Sox6-202ENSMUST00000106612 Map4P27546 1125 aaKnown RBP9.99□□□□□ -0.81
Sox6-202ENSMUST00000106612 Cttnbp2B9EJA2 1648 aa9.98□□□□□ -0.81
Sox6-202ENSMUST00000106612 MsnP26041 577 aaKnown RBP9.98□□□□□ -0.81
Sox6-202ENSMUST00000106612 Pds5bQ4VA53 1446 aaKnown RBP9.97□□□□□ -0.81
Sox6-202ENSMUST00000106612 Plekhh2Q8C115 1491 aa9.96□□□□□ -0.81
Sox6-202ENSMUST00000106612 Ankrd36D3Z4K0 1415 aa9.96□□□□□ -0.81
Sox6-202ENSMUST00000106612 Gm973E9Q295 1059 aa9.96□□□□□ -0.81
Sox6-202ENSMUST00000106612 Ddrgk1Q80WW9 315 aa9.96□□□□□ -0.81
Sox6-202ENSMUST00000106612 Mre11Q61216 706 aa9.95□□□□□ -0.82
Sox6-202ENSMUST00000106612 Hsp90b1P08113 802 aaKnown RBP9.95□□□□□ -0.82
Sox6-202ENSMUST00000106612 Golga2Q921M4 999 aa9.95□□□□□ -0.82
Sox6-202ENSMUST00000106612 Trak1Q6PD31 939 aa9.94□□□□□ -0.82
Sox6-202ENSMUST00000106612 PnnO35691 725 aaKnown RBP9.94□□□□□ -0.82
Sox6-202ENSMUST00000106612 Calcoco2A2A6M5 331 aa9.93□□□□□ -0.82
Sox6-202ENSMUST00000106612 Cabp1Q9JLK7 227 aa9.93□□□□□ -0.82
Sox6-202ENSMUST00000106612 Pde3bQ61409 1100 aa9.92□□□□□ -0.82
Sox6-202ENSMUST00000106612 Carmil1Q6EDY6 1374 aa9.92□□□□□ -0.82
Sox6-202ENSMUST00000106612 Ifit1bl1D3Z6F0 470 aa9.92□□□□□ -0.82
Sox6-202ENSMUST00000106612 Stk24Q99KH8 431 aa9.92□□□□□ -0.82
Sox6-202ENSMUST00000106612 Gtf2e1Q9D0D5 440 aa9.92□□□□□ -0.82
Sox6-202ENSMUST00000106612 Dhx57Q6P5D3 1388 aaKnown RBP9.91□□□□□ -0.82
Sox6-202ENSMUST00000106612 Usp47Q8BY87 1376 aa9.91□□□□□ -0.82
Sox6-202ENSMUST00000106612 ChgaP26339 463 aaKnown RBP9.91□□□□□ -0.82
Sox6-202ENSMUST00000106612 Pes1Q9EQ61 584 aaKnown RBP9.9□□□□□ -0.82
Sox6-202ENSMUST00000106612 Safb2Q80YR5 991 aaKnown RBP9.9□□□□□ -0.82
Sox6-202ENSMUST00000106612 Ylpm1Q9R0I7 1386 aaKnown RBP9.9□□□□□ -0.82
Sox6-202ENSMUST00000106612 Mfap1aC0HKD8 439 aaKnown RBP9.9□□□□□ -0.83
Sox6-202ENSMUST00000106612 Mfap1bC0HKD9 439 aaKnown RBP9.9□□□□□ -0.83
Sox6-202ENSMUST00000106612 AampJ3QN89 436 aa9.89□□□□□ -0.83
Sox6-202ENSMUST00000106612 Sart3Q9JLI8 962 aaKnown RBP9.89□□□□□ -0.83
Sox6-202ENSMUST00000106612 Znf326O88291 580 aa9.89□□□□□ -0.83
Sox6-202ENSMUST00000106612 Rsph3aQ3UFY4 516 aa9.89□□□□□ -0.83
Sox6-202ENSMUST00000106612 Stard8Q8K031 1019 aa9.89□□□□□ -0.83
Sox6-202ENSMUST00000106612 Cnga1P29974 684 aa9.89□□□□□ -0.83
Sox6-202ENSMUST00000106612 VgfQ0VGU4 617 aa9.89□□□□□ -0.83
Sox6-202ENSMUST00000106612 Cux1P53564 1515 aa9.89□□□□□ -0.83
Sox6-202ENSMUST00000106612 Nup155Q99P88 1391 aaKnown RBP9.89□□□□□ -0.83
Sox6-202ENSMUST00000106612 Becn1O88597 448 aa9.88□□□□□ -0.83
Sox6-202ENSMUST00000106612 Smarce1O54941 411 aaKnown RBP9.88□□□□□ -0.83
Sox6-202ENSMUST00000106612 RdxP26043 583 aaKnown RBP9.88□□□□□ -0.83
Sox6-202ENSMUST00000106612 U2af1Q9D883 239 aaKnown RBP9.88□□□□□ -0.83
Sox6-202ENSMUST00000106612 Smarca4Q3TKT4 1613 aaKnown RBP9.88□□□□□ -0.83
Sox6-202ENSMUST00000106612 Ccar1Q8CH18 1146 aaKnown RBP9.88□□□□□ -0.83
Sox6-202ENSMUST00000106612 Cecr2E9Q2Z1 1453 aa9.88□□□□□ -0.83
Sox6-202ENSMUST00000106612 Rpap1Q80TE0 1409 aa9.88□□□□□ -0.83
Sox6-202ENSMUST00000106612 CrbnQ8C7D2 445 aa9.88□□□□□ -0.83
Sox6-202ENSMUST00000106612 Irx6Q9ER75 438 aa9.87□□□□□ -0.83
Sox6-202ENSMUST00000106612 1700019A02RikA0A087WPV9 146 aa9.87□□□□□ -0.83
Sox6-202ENSMUST00000106612 Rock1P70335 1354 aa9.87□□□□□ -0.83
Sox6-202ENSMUST00000106612 Atp6v1dP57746 247 aa9.87□□□□□ -0.83
Sox6-202ENSMUST00000106612 Srcin1Q9QWI6 1250 aa9.87□□□□□ -0.83
Sox6-202ENSMUST00000106612 Pcmtd1P59913 357 aa9.86□□□□□ -0.83
Sox6-202ENSMUST00000106612 Ccnb3Q810T2 1396 aa9.86□□□□□ -0.83
Sox6-202ENSMUST00000106612 Ush1cQ9ES64 910 aa9.86□□□□□ -0.83
Sox6-202ENSMUST00000106612 Dcaf11Q91VU6 549 aa9.86□□□□□ -0.83
Sox6-202ENSMUST00000106612 Glipr1l2Q9CQ35 332 aa9.86□□□□□ -0.83
Sox6-202ENSMUST00000106612 Znf710Q3U288 666 aa9.86□□□□□ -0.83
Sox6-202ENSMUST00000106612 Cald1E9QA15 768 aaKnown RBP9.85□□□□□ -0.83
Sox6-202ENSMUST00000106612 Tmco5bQ80X59 307 aa9.84□□□□□ -0.83
Sox6-202ENSMUST00000106612 Cluap1Q8R3P7 413 aa9.84□□□□□ -0.83
Sox6-202ENSMUST00000106612 Cgnl1Q6AW69 1298 aa9.84□□□□□ -0.83
Sox6-202ENSMUST00000106612 SlkO54988 1233 aa9.84□□□□□ -0.84
Sox6-202ENSMUST00000106612 Rtf1A2AQ19 715 aaKnown RBP9.83□□□□□ -0.84
Sox6-202ENSMUST00000106612 Ksr2Q3UVC0 959 aa9.83□□□□□ -0.84
Sox6-202ENSMUST00000106612 Cc2d2aQ8CFW7 1633 aa9.83□□□□□ -0.84
Sox6-202ENSMUST00000106612 R3hcc1Q8BSI6 488 aa9.83□□□□□ -0.84
Sox6-202ENSMUST00000106612 Sh3bp5Q9Z131 463 aa9.83□□□□□ -0.84
Sox6-202ENSMUST00000106612 Vps8Q0P5W1 1427 aa9.82□□□□□ -0.84
Sox6-202ENSMUST00000106612 Polr1aO35134 1717 aaKnown RBP9.82□□□□□ -0.84
Sox6-202ENSMUST00000106612 Cspp1B2RX88 1205 aa9.82□□□□□ -0.84
Sox6-202ENSMUST00000106612 ScribQ80U72 1612 aa9.82□□□□□ -0.84
Sox6-202ENSMUST00000106612 Prkrip1Q9CWV6 186 aaKnown RBP9.82□□□□□ -0.84
Sox6-202ENSMUST00000106612 Plppr3Q7TPB0 716 aa9.81□□□□□ -0.84
Sox6-202ENSMUST00000106612 Dapk1Q80YE7 1442 aa9.81□□□□□ -0.84
Sox6-202ENSMUST00000106612 Slc4a1apE9PX68 744 aa9.81□□□□□ -0.84
Sox6-202ENSMUST00000106612 U2surpQ6NV83 1029 aaKnown RBP9.81□□□□□ -0.84
Sox6-202ENSMUST00000106612 Ralbp1Q62172 648 aa9.8□□□□□ -0.84
Sox6-202ENSMUST00000106612 Znf316Q6PGE4 1016 aa9.8□□□□□ -0.84
Sox6-202ENSMUST00000106612 GorabQ8BRM2 368 aa9.8□□□□□ -0.84
Sox6-202ENSMUST00000106612 Pdcl3Q8BVF2 240 aa9.8□□□□□ -0.84
Sox6-202ENSMUST00000106612 Kif16bB1AVY7 1312 aa9.8□□□□□ -0.84
Sox6-202ENSMUST00000106612 Pknox2Q8BG99 474 aa9.8□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms