RNA–Protein interactions for RNA: ENSMUST00000097653.10

Col6a3-202, Transcript of Collagen, type VI, alpha 3, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a3, Length 9,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-202ENSMUST00000097653 Dnai1Q8C0M8 701 aa13.34□□□□□ -0.27
Col6a3-202ENSMUST00000097653 Slc4a3P16283 1227 aa13.34□□□□□ -0.27
Col6a3-202ENSMUST00000097653 Sh3bp5Q9Z131 463 aa13.34□□□□□ -0.27
Col6a3-202ENSMUST00000097653 Tmf1B9EKI3 1091 aa13.34□□□□□ -0.27
Col6a3-202ENSMUST00000097653 NgefQ8CHT1 710 aa13.34□□□□□ -0.27
Col6a3-202ENSMUST00000097653 Chmp5Q9D7S9 219 aa13.34□□□□□ -0.27
Col6a3-202ENSMUST00000097653 Ccdc88bQ4QRL3 1481 aa13.34□□□□□ -0.27
Col6a3-202ENSMUST00000097653 Spryd3E9Q9B3 442 aa13.33□□□□□ -0.27
Col6a3-202ENSMUST00000097653 Cald1E9QA15 768 aaKnown RBP13.33□□□□□ -0.27
Col6a3-202ENSMUST00000097653 EspnQ9ET47 871 aa13.33□□□□□ -0.28
Col6a3-202ENSMUST00000097653 Baz1bQ9Z277 1479 aa13.32□□□□□ -0.28
Col6a3-202ENSMUST00000097653 RdxP26043 583 aaKnown RBP13.32□□□□□ -0.28
Col6a3-202ENSMUST00000097653 Dnttip2Q8R2M2 758 aaKnown RBP13.32□□□□□ -0.28
Col6a3-202ENSMUST00000097653 Ipo9Q91YE6 1041 aa13.31□□□□□ -0.28
Col6a3-202ENSMUST00000097653 Erich6bQ9D4S6 220 aa13.31□□□□□ -0.28
Col6a3-202ENSMUST00000097653 Supt16hQ920B9 1047 aa13.31□□□□□ -0.28
Col6a3-202ENSMUST00000097653 Ftsj3Q9DBE9 838 aaKnown RBP13.31□□□□□ -0.28
Col6a3-202ENSMUST00000097653 Dnai2A2AC93 623 aa13.3□□□□□ -0.28
Col6a3-202ENSMUST00000097653 Cc2d2aQ8CFW7 1633 aa13.3□□□□□ -0.28
Col6a3-202ENSMUST00000097653 Dusp9Q7TNL7 452 aa13.3□□□□□ -0.28
Col6a3-202ENSMUST00000097653 HnrnpuQ8VEK3 800 aaKnown RBP13.3□□□□□ -0.28
Col6a3-202ENSMUST00000097653 Kif27Q7M6Z4 1394 aa13.29□□□□□ -0.28
Col6a3-202ENSMUST00000097653 Hsp90b1P08113 802 aaKnown RBP13.29□□□□□ -0.28
Col6a3-202ENSMUST00000097653 Rundc1Q0VDN7 615 aa13.29□□□□□ -0.28
Col6a3-202ENSMUST00000097653 Stk24Q99KH8 431 aa13.29□□□□□ -0.28
Col6a3-202ENSMUST00000097653 1700019A02RikA0A087WPV9 146 aa13.29□□□□□ -0.28
Col6a3-202ENSMUST00000097653 Anapc15P60007 132 aa13.28□□□□□ -0.28
Col6a3-202ENSMUST00000097653 Pkd2O35245 966 aa13.28□□□□□ -0.28
Col6a3-202ENSMUST00000097653 Smarca2Q6DIC0 1577 aa13.27□□□□□ -0.28
Col6a3-202ENSMUST00000097653 Zscan21Q07231 555 aa13.27□□□□□ -0.28
Col6a3-202ENSMUST00000097653 Tpm3-rs7D3Z2H9 248 aa13.26□□□□□ -0.29
Col6a3-202ENSMUST00000097653 Rrp12Q6P5B0 1295 aaKnown RBP13.26□□□□□ -0.29
Col6a3-202ENSMUST00000097653 Noc3lQ8VI84 807 aaKnown RBP13.25□□□□□ -0.29
Col6a3-202ENSMUST00000097653 Rassf8Q8CJ96 419 aa13.24□□□□□ -0.29
Col6a3-202ENSMUST00000097653 Cnga1P29974 684 aa13.24□□□□□ -0.29
Col6a3-202ENSMUST00000097653 Exoc6Q8R313 802 aa13.23□□□□□ -0.29
Col6a3-202ENSMUST00000097653 Plekhh2Q8C115 1491 aa13.23□□□□□ -0.29
Col6a3-202ENSMUST00000097653 Synj1Q8CHC4 1574 aa13.23□□□□□ -0.29
Col6a3-202ENSMUST00000097653 Ggt6Q6PDE7 497 aa13.22□□□□□ -0.29
Col6a3-202ENSMUST00000097653 Crybg2B7ZCC2 1516 aa13.22□□□□□ -0.29
Col6a3-202ENSMUST00000097653 Speer4f1Q9D5Q6 258 aa13.22□□□□□ -0.29
Col6a3-202ENSMUST00000097653 Pde3bQ61409 1100 aa13.21□□□□□ -0.29
Col6a3-202ENSMUST00000097653 CalrP14211 416 aaKnown RBP13.21□□□□□ -0.29
Col6a3-202ENSMUST00000097653 Ipo8Q7TMY7 1010 aa13.21□□□□□ -0.3
Col6a3-202ENSMUST00000097653 CntlnA2AM05 1397 aa13.21□□□□□ -0.3
Col6a3-202ENSMUST00000097653 Nol10Q5RJG1 687 aaKnown RBP13.21□□□□□ -0.3
Col6a3-202ENSMUST00000097653 Map4P27546 1125 aaKnown RBP13.2□□□□□ -0.3
Col6a3-202ENSMUST00000097653 Pcmtd1P59913 357 aa13.2□□□□□ -0.3
Col6a3-202ENSMUST00000097653 Polr1aO35134 1717 aaKnown RBP13.2□□□□□ -0.3
Col6a3-202ENSMUST00000097653 Ifit1bl1D3Z6F0 470 aa13.19□□□□□ -0.3
Col6a3-202ENSMUST00000097653 Golga2Q921M4 999 aa13.19□□□□□ -0.3
Col6a3-202ENSMUST00000097653 Mphosph9A6H5Y1 991 aa13.19□□□□□ -0.3
Col6a3-202ENSMUST00000097653 Sart3Q9JLI8 962 aaKnown RBP13.19□□□□□ -0.3
Col6a3-202ENSMUST00000097653 Slc4a1apE9PX68 744 aa13.18□□□□□ -0.3
Col6a3-202ENSMUST00000097653 Rock2P70336 1388 aa13.18□□□□□ -0.3
Col6a3-202ENSMUST00000097653 Pds5bQ4VA53 1446 aaKnown RBP13.18□□□□□ -0.3
Col6a3-202ENSMUST00000097653 Rtf1A2AQ19 715 aaKnown RBP13.18□□□□□ -0.3
Col6a3-202ENSMUST00000097653 Ddrgk1Q80WW9 315 aa13.18□□□□□ -0.3
Col6a3-202ENSMUST00000097653 Becn1O88597 448 aa13.17□□□□□ -0.3
Col6a3-202ENSMUST00000097653 Zrsr2Q62377 462 aaKnown RBP13.17□□□□□ -0.3
Col6a3-202ENSMUST00000097653 Aebp1Q640N1 1128 aa13.17□□□□□ -0.3
Col6a3-202ENSMUST00000097653 Gtf2e1Q9D0D5 440 aa13.16□□□□□ -0.3
Col6a3-202ENSMUST00000097653 Smg6P61406 1418 aaKnown RBP13.16□□□□□ -0.3
Col6a3-202ENSMUST00000097653 Rpap1Q80TE0 1409 aa13.16□□□□□ -0.3
Col6a3-202ENSMUST00000097653 Trak1Q6PD31 939 aa13.16□□□□□ -0.3
Col6a3-202ENSMUST00000097653 Q8BT18 775 aa13.15□□□□□ -0.3
Col6a3-202ENSMUST00000097653 Smarca4Q3TKT4 1613 aaKnown RBP13.15□□□□□ -0.3
Col6a3-202ENSMUST00000097653 Kiaa0754Q69ZZ9 979 aa13.15□□□□□ -0.3
Col6a3-202ENSMUST00000097653 Tpm3P21107 285 aaKnown RBP13.14□□□□□ -0.31
Col6a3-202ENSMUST00000097653 Rapgef2Q8CHG7 1496 aa13.14□□□□□ -0.31
Col6a3-202ENSMUST00000097653 Podxl2Q8CAE9 603 aa13.14□□□□□ -0.31
Col6a3-202ENSMUST00000097653 U2surpQ6NV83 1029 aaKnown RBP13.14□□□□□ -0.31
Col6a3-202ENSMUST00000097653 Sycp2Q9CUU3 1500 aa13.13□□□□□ -0.31
Col6a3-202ENSMUST00000097653 Sin3aQ60520 1274 aaKnown RBP13.13□□□□□ -0.31
Col6a3-202ENSMUST00000097653 Isy1Q69ZQ2 285 aaKnown RBP13.13□□□□□ -0.31
Col6a3-202ENSMUST00000097653 R3hcc1Q8BSI6 488 aa13.13□□□□□ -0.31
Col6a3-202ENSMUST00000097653 U2af1Q9D883 239 aaKnown RBP13.13□□□□□ -0.31
Col6a3-202ENSMUST00000097653 Cux1P53564 1515 aa13.13□□□□□ -0.31
Col6a3-202ENSMUST00000097653 Tmco5bQ80X59 307 aa13.13□□□□□ -0.31
Col6a3-202ENSMUST00000097653 Smarce1O54941 411 aaKnown RBP13.13□□□□□ -0.31
Col6a3-202ENSMUST00000097653 UacaQ8CGB3 1411 aa13.12□□□□□ -0.31
Col6a3-202ENSMUST00000097653 Prm3Q62100 101 aa13.12□□□□□ -0.31
Col6a3-202ENSMUST00000097653 Trim30aP15533 496 aa13.11□□□□□ -0.31
Col6a3-202ENSMUST00000097653 HdgfP51859 237 aaKnown RBP13.11□□□□□ -0.31
Col6a3-202ENSMUST00000097653 Mfap1aC0HKD8 439 aaKnown RBP13.11□□□□□ -0.31
Col6a3-202ENSMUST00000097653 Mfap1bC0HKD9 439 aaKnown RBP13.11□□□□□ -0.31
Col6a3-202ENSMUST00000097653 Cspp1B2RX88 1205 aa13.1□□□□□ -0.31
Col6a3-202ENSMUST00000097653 VgfQ0VGU4 617 aa13.1□□□□□ -0.31
Col6a3-202ENSMUST00000097653 Spag9Q58A65 1321 aaKnown RBP13.1□□□□□ -0.31
Col6a3-202ENSMUST00000097653 Iffo2Q8R2V2 512 aa13.09□□□□□ -0.31
Col6a3-202ENSMUST00000097653 Ccdc34Q3UI66 367 aa13.09□□□□□ -0.31
Col6a3-202ENSMUST00000097653 CftrP26361 1476 aa13.09□□□□□ -0.31
Col6a3-202ENSMUST00000097653 Ylpm1Q9R0I7 1386 aaKnown RBP13.09□□□□□ -0.31
Col6a3-202ENSMUST00000097653 Dhx57Q6P5D3 1388 aaKnown RBP13.08□□□□□ -0.31
Col6a3-202ENSMUST00000097653 Nup155Q99P88 1391 aaKnown RBP13.08□□□□□ -0.32
Col6a3-202ENSMUST00000097653 Cabp1Q9JLK7 227 aa13.08□□□□□ -0.32
Col6a3-202ENSMUST00000097653 ScribQ80U72 1612 aa13.07□□□□□ -0.32
Col6a3-202ENSMUST00000097653 Ccar1Q8CH18 1146 aaKnown RBP13.07□□□□□ -0.32
Col6a3-202ENSMUST00000097653 Dcaf11Q91VU6 549 aa13.07□□□□□ -0.32
Col6a3-202ENSMUST00000097653 Usp47Q8BY87 1376 aa13.07□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 119.2 ms