RNA–Protein interactions for RNA: ENSMUST00000097653.10

Col6a3-202, Transcript of Collagen, type VI, alpha 3, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a3, Length 9,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-202ENSMUST00000097653 Rhox8Q6VSS7 320 aa18.23■□□□□ 0.51
Col6a3-202ENSMUST00000097653 Cngb1E1AZ71 1325 aa17.33■□□□□ 0.36
Col6a3-202ENSMUST00000097653 Rpgrip1Q9EPQ2 1331 aa17.33■□□□□ 0.36
Col6a3-202ENSMUST00000097653 Pelp1Q9DBD5 1123 aaKnown RBP17.15■□□□□ 0.34
Col6a3-202ENSMUST00000097653 Las1lA2BE28 776 aaKnown RBP17.07■□□□□ 0.32
Col6a3-202ENSMUST00000097653 Ehmt2Q9Z148 1263 aaKnown RBP16.54■□□□□ 0.24
Col6a3-202ENSMUST00000097653 Rtl1Q7M732 1744 aa16.48■□□□□ 0.23
Col6a3-202ENSMUST00000097653 Wdr66E9Q743 1299 aa16.39■□□□□ 0.21
Col6a3-202ENSMUST00000097653 Amer1Q7TS75 1132 aa16.32■□□□□ 0.2
Col6a3-202ENSMUST00000097653 NischQ80TM9 1593 aa16.28■□□□□ 0.2
Col6a3-202ENSMUST00000097653 4930567H17RikQ3V0K5 233 aa16.27■□□□□ 0.19
Col6a3-202ENSMUST00000097653 Ube2uB1AUC4 352 aa16.25■□□□□ 0.19
Col6a3-202ENSMUST00000097653 Ccdc136Q3TVA9 1136 aa16.2■□□□□ 0.18
Col6a3-202ENSMUST00000097653 Ccdc180J3QNE4 1664 aa16.18■□□□□ 0.18
Col6a3-202ENSMUST00000097653 Zeb1Q64318 1117 aa16.09■□□□□ 0.17
Col6a3-202ENSMUST00000097653 Esf1Q3V1V3 845 aaKnown RBP16.09■□□□□ 0.17
Col6a3-202ENSMUST00000097653 Myt1Q8CFC2 1127 aa16.02■□□□□ 0.16
Col6a3-202ENSMUST00000097653 Trim41Q5NCC3 630 aa15.96■□□□□ 0.15
Col6a3-202ENSMUST00000097653 CenpbP27790 599 aa15.95■□□□□ 0.14
Col6a3-202ENSMUST00000097653 Gab3Q8BSM5 595 aa15.85■□□□□ 0.13
Col6a3-202ENSMUST00000097653 Acin1Q9JIX8 1338 aaKnown RBP15.8■□□□□ 0.12
Col6a3-202ENSMUST00000097653 Npm2Q80W85 207 aa15.8■□□□□ 0.12
Col6a3-202ENSMUST00000097653 Stra8P70278 393 aa15.78■□□□□ 0.12
Col6a3-202ENSMUST00000097653 NefmP08553 848 aa15.67■□□□□ 0.1
Col6a3-202ENSMUST00000097653 Myt1lP97500 1187 aa15.66■□□□□ 0.1
Col6a3-202ENSMUST00000097653 UbtfP25976 765 aaKnown RBP15.45■□□□□ 0.06
Col6a3-202ENSMUST00000097653 4933416C03RikQ3V063 378 aa15.37■□□□□ 0.05
Col6a3-202ENSMUST00000097653 Ttbk1Q6PCN3 1308 aa15.32■□□□□ 0.04
Col6a3-202ENSMUST00000097653 HrcG5E8J6 738 aa15.32■□□□□ 0.04
Col6a3-202ENSMUST00000097653 Slc24a1Q91WD8 1130 aa15.28■□□□□ 0.04
Col6a3-202ENSMUST00000097653 Cdk11bP24788 784 aaKnown RBP15.27■□□□□ 0.03
Col6a3-202ENSMUST00000097653 Rtl5Q5DTT4 599 aa15.26■□□□□ 0.03
Col6a3-202ENSMUST00000097653 Pcgf6Q99NA9 353 aa15.23■□□□□ 0.03
Col6a3-202ENSMUST00000097653 NeflP08551 543 aa15.17■□□□□ 0.02
Col6a3-202ENSMUST00000097653 Tnnt3Q9QZ47 272 aa15.15■□□□□ 0.02
Col6a3-202ENSMUST00000097653 Anp32bQ9EST5 272 aaKnown RBP15.12■□□□□ 0.01
Col6a3-202ENSMUST00000097653 Abcc9P70170 1546 aa15.08■□□□□ 0
Col6a3-202ENSMUST00000097653 Nop58Q6DFW4 536 aaKnown RBP15.07■□□□□ 0
Col6a3-202ENSMUST00000097653 NrdcQ8BHG1 1161 aa15.04■□□□□ -0
Col6a3-202ENSMUST00000097653 Zcchc6Q5BLK4 1491 aaKnown RBP15.03■□□□□ -0
Col6a3-202ENSMUST00000097653 NclP09405 707 aaKnown RBP15.01□□□□□ -0.01
Col6a3-202ENSMUST00000097653 Os9Q8K2C7 672 aa14.99□□□□□ -0.01
Col6a3-202ENSMUST00000097653 Fam50aQ9WV03 339 aaKnown RBP14.96□□□□□ -0.01
Col6a3-202ENSMUST00000097653 Il27Q8K3I6 234 aa14.93□□□□□ -0.02
Col6a3-202ENSMUST00000097653 TonslQ6NZL6 1363 aa14.91□□□□□ -0.02
Col6a3-202ENSMUST00000097653 Supt5hO55201 1082 aaKnown RBP14.89□□□□□ -0.03
Col6a3-202ENSMUST00000097653 Eif5bQ05D44 1216 aaKnown RBP14.84□□□□□ -0.03
Col6a3-202ENSMUST00000097653 Ythdc1E9Q5K9 736 aaKnown RBP14.84□□□□□ -0.03
Col6a3-202ENSMUST00000097653 Neurod1Q60867 357 aa14.84□□□□□ -0.03
Col6a3-202ENSMUST00000097653 Ap3b1Q9Z1T1 1105 aa14.82□□□□□ -0.04
Col6a3-202ENSMUST00000097653 DiexfQ8BTT6 772 aaKnown RBP14.82□□□□□ -0.04
Col6a3-202ENSMUST00000097653 Gm35339A0A140LHH9 1649 aa14.82□□□□□ -0.04
Col6a3-202ENSMUST00000097653 Ppargc1bQ8VHJ7 1014 aa14.73□□□□□ -0.05
Col6a3-202ENSMUST00000097653 Mier1Q5UAK0 511 aa14.73□□□□□ -0.05
Col6a3-202ENSMUST00000097653 ClspnQ80YR7 1315 aa14.67□□□□□ -0.06
Col6a3-202ENSMUST00000097653 Abcc8B2RUS7 1588 aa14.61□□□□□ -0.07
Col6a3-202ENSMUST00000097653 CatipB9EKE5 520 aa14.6□□□□□ -0.07
Col6a3-202ENSMUST00000097653 Gm13697A2AK42 830 aa14.59□□□□□ -0.07
Col6a3-202ENSMUST00000097653 Anp32aO35381 247 aa14.56□□□□□ -0.08
Col6a3-202ENSMUST00000097653 DaxxO35613 739 aa14.55□□□□□ -0.08
Col6a3-202ENSMUST00000097653 Dcaf1Q80TR8 1506 aa14.55□□□□□ -0.08
Col6a3-202ENSMUST00000097653 Rb1cc1Q9ESK9 1588 aa14.51□□□□□ -0.09
Col6a3-202ENSMUST00000097653 Ccdc9Q8VC31 543 aaKnown RBP14.51□□□□□ -0.09
Col6a3-202ENSMUST00000097653 Plekhg3Q4VAC9 1341 aa14.47□□□□□ -0.09
Col6a3-202ENSMUST00000097653 Brd4Q9ESU6 1400 aaKnown RBP14.43□□□□□ -0.1
Col6a3-202ENSMUST00000097653 Chic1Q8CBW7 227 aa14.41□□□□□ -0.1
Col6a3-202ENSMUST00000097653 Cep164Q5DU05 1446 aa14.41□□□□□ -0.1
Col6a3-202ENSMUST00000097653 Hnrnpul2Q00PI9 745 aaKnown RBP14.4□□□□□ -0.1
Col6a3-202ENSMUST00000097653 Zbtb7cQ8VCZ7 619 aa14.39□□□□□ -0.11
Col6a3-202ENSMUST00000097653 Atp1b4Q99ME6 356 aa14.36□□□□□ -0.11
Col6a3-202ENSMUST00000097653 Anks4bQ8K3X6 423 aa14.36□□□□□ -0.11
Col6a3-202ENSMUST00000097653 Lmod2Q3UHZ5 550 aa14.36□□□□□ -0.11
Col6a3-202ENSMUST00000097653 Npm1Q61937 292 aaKnown RBP14.35□□□□□ -0.11
Col6a3-202ENSMUST00000097653 Nlrp6Q91WS2 869 aa14.34□□□□□ -0.11
Col6a3-202ENSMUST00000097653 Gm13695A2AK44 830 aa14.33□□□□□ -0.12
Col6a3-202ENSMUST00000097653 Upf2A2AT37 1269 aaKnown RBP14.33□□□□□ -0.12
Col6a3-202ENSMUST00000097653 Clip1Q922J3 1391 aa14.28□□□□□ -0.12
Col6a3-202ENSMUST00000097653 Hdac5Q9Z2V6 1113 aa14.28□□□□□ -0.12
Col6a3-202ENSMUST00000097653 Csrnp3P59055 597 aa14.27□□□□□ -0.12
Col6a3-202ENSMUST00000097653 Erich6D3Z6S9 713 aa14.25□□□□□ -0.13
Col6a3-202ENSMUST00000097653 Aplp2Q06335 707 aa14.25□□□□□ -0.13
Col6a3-202ENSMUST00000097653 Polr3glQ8R0C0 218 aa14.23□□□□□ -0.13
Col6a3-202ENSMUST00000097653 Eid3Q3V124 375 aa14.23□□□□□ -0.13
Col6a3-202ENSMUST00000097653 Ifnlr1Q8CGK5 535 aa14.22□□□□□ -0.13
Col6a3-202ENSMUST00000097653 Mapk8ip2Q9ERE9 830 aa14.22□□□□□ -0.13
Col6a3-202ENSMUST00000097653 Sall2Q9QX96 1004 aa14.21□□□□□ -0.13
Col6a3-202ENSMUST00000097653 Ccer2J3QPU5 274 aa14.21□□□□□ -0.14
Col6a3-202ENSMUST00000097653 Hsp90aa1P07901 733 aaKnown RBP14.2□□□□□ -0.14
Col6a3-202ENSMUST00000097653 Calr4Q3TQS0 420 aa14.16□□□□□ -0.14
Col6a3-202ENSMUST00000097653 Zbtb4Q5F293 982 aa14.16□□□□□ -0.14
Col6a3-202ENSMUST00000097653 Gm38655A0A286YDK6 273 aa14.14□□□□□ -0.15
Col6a3-202ENSMUST00000097653 Lmod3E9QA62 571 aa14.12□□□□□ -0.15
Col6a3-202ENSMUST00000097653 Prdm10Q3UTQ7 1184 aa14.11□□□□□ -0.15
Col6a3-202ENSMUST00000097653 Ppp4r2Q0VGB7 417 aa14.1□□□□□ -0.15
Col6a3-202ENSMUST00000097653 ArxO35085 564 aa14.08□□□□□ -0.16
Col6a3-202ENSMUST00000097653 Plppr3Q7TPB0 716 aa14.08□□□□□ -0.16
Col6a3-202ENSMUST00000097653 Trim44Q9QXA7 346 aa14.06□□□□□ -0.16
Col6a3-202ENSMUST00000097653 Wdr43Q6ZQL4 677 aaKnown RBP14.03□□□□□ -0.16
Col6a3-202ENSMUST00000097653 Baz1aO88379 1555 aa14.02□□□□□ -0.16
Col6a3-202ENSMUST00000097653 BlmO88700 1416 aa14□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 60 ms