RNA–Protein interactions for RNA: ENSMUST00000084838.12

Cd47-201, Transcript of Leukocyte surface antigen CD47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cd47, Length 5,277 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47-201ENSMUST00000084838 Rtn4Q99P72 1162 aaKnown RBP23.47■■□□□ 1.35
Cd47-201ENSMUST00000084838 Tmf1B9EKI3 1091 aa23.45■■□□□ 1.34
Cd47-201ENSMUST00000084838 Ggt6Q6PDE7 497 aa23.45■■□□□ 1.34
Cd47-201ENSMUST00000084838 Cttnbp2B9EJA2 1648 aa23.44■■□□□ 1.34
Cd47-201ENSMUST00000084838 DekQ7TNV0 380 aaKnown RBP23.43■■□□□ 1.34
Cd47-201ENSMUST00000084838 Znf326O88291 580 aa23.43■■□□□ 1.34
Cd47-201ENSMUST00000084838 Wwc2Q6NXJ0 1187 aa23.42■■□□□ 1.34
Cd47-201ENSMUST00000084838 Ccnb3Q810T2 1396 aa23.41■■□□□ 1.34
Cd47-201ENSMUST00000084838 Rtf1A2AQ19 715 aaKnown RBP23.4■■□□□ 1.34
Cd47-201ENSMUST00000084838 HdgfP51859 237 aaKnown RBP23.4■■□□□ 1.34
Cd47-201ENSMUST00000084838 CanxP35564 591 aaKnown RBP23.38■■□□□ 1.33
Cd47-201ENSMUST00000084838 Iqgap2Q3UQ44 1575 aa23.38■■□□□ 1.33
Cd47-201ENSMUST00000084838 WrnO09053 1401 aa23.37■■□□□ 1.33
Cd47-201ENSMUST00000084838 Srcin1Q9QWI6 1250 aa23.36■■□□□ 1.33
Cd47-201ENSMUST00000084838 Soga1E1U8D0 1418 aa23.35■■□□□ 1.33
Cd47-201ENSMUST00000084838 Rock2P70336 1388 aa23.33■■□□□ 1.32
Cd47-201ENSMUST00000084838 Sox12Q04890 314 aa23.33■■□□□ 1.32
Cd47-201ENSMUST00000084838 Jph4Q80WT0 628 aa23.32■■□□□ 1.32
Cd47-201ENSMUST00000084838 Birc3O08863 600 aa23.32■■□□□ 1.32
Cd47-201ENSMUST00000084838 Stard8Q8K031 1019 aa23.32■■□□□ 1.32
Cd47-201ENSMUST00000084838 Map7O88735 730 aa23.31■■□□□ 1.32
Cd47-201ENSMUST00000084838 UacaQ8CGB3 1411 aa23.31■■□□□ 1.32
Cd47-201ENSMUST00000084838 Sin3aQ60520 1274 aaKnown RBP23.3■■□□□ 1.32
Cd47-201ENSMUST00000084838 Eif4g2Q62448 906 aaKnown RBP23.3■■□□□ 1.32
Cd47-201ENSMUST00000084838 Dcaf11Q91VU6 549 aa23.3■■□□□ 1.32
Cd47-201ENSMUST00000084838 U2af1Q9D883 239 aaKnown RBP23.3■■□□□ 1.32
Cd47-201ENSMUST00000084838 Vsig10D3YX43 558 aa23.29■■□□□ 1.32
Cd47-201ENSMUST00000084838 Rwdd1Q9CQK7 243 aa23.29■■□□□ 1.32
Cd47-201ENSMUST00000084838 Plin1Q8CGN5 517 aa23.27■■□□□ 1.32
Cd47-201ENSMUST00000084838 Znf316Q6PGE4 1016 aa23.26■■□□□ 1.31
Cd47-201ENSMUST00000084838 Speer4f1Q9D5Q6 258 aa23.26■■□□□ 1.31
Cd47-201ENSMUST00000084838 Zscan21Q07231 555 aa23.25■■□□□ 1.31
Cd47-201ENSMUST00000084838 U2surpQ6NV83 1029 aaKnown RBP23.25■■□□□ 1.31
Cd47-201ENSMUST00000084838 Utp14aQ640M1 767 aaKnown RBP23.25■■□□□ 1.31
Cd47-201ENSMUST00000084838 Ythdc1E9Q5K9 736 aaKnown RBP23.24■■□□□ 1.31
Cd47-201ENSMUST00000084838 Fan1Q69ZT1 1020 aa23.24■■□□□ 1.31
Cd47-201ENSMUST00000084838 Mbd3Q9Z2D8 285 aaKnown RBP23.23■■□□□ 1.31
Cd47-201ENSMUST00000084838 Spag9Q58A65 1321 aaKnown RBP23.22■■□□□ 1.31
Cd47-201ENSMUST00000084838 HnrnpuQ8VEK3 800 aaKnown RBP23.22■■□□□ 1.31
Cd47-201ENSMUST00000084838 CenpjQ569L8 1344 aa23.21■■□□□ 1.31
Cd47-201ENSMUST00000084838 Exoc6Q8R313 802 aa23.21■■□□□ 1.31
Cd47-201ENSMUST00000084838 Ncoa2Q61026 1462 aa23.21■■□□□ 1.31
Cd47-201ENSMUST00000084838 Armcx1Q9CX83 456 aa23.2■■□□□ 1.3
Cd47-201ENSMUST00000084838 Pes1Q9EQ61 584 aaKnown RBP23.19■■□□□ 1.3
Cd47-201ENSMUST00000084838 Efcab5A0JP43 1406 aa23.19■■□□□ 1.3
Cd47-201ENSMUST00000084838 Golga2Q921M4 999 aa23.18■■□□□ 1.3
Cd47-201ENSMUST00000084838 Hsp90b1P08113 802 aaKnown RBP23.17■■□□□ 1.3
Cd47-201ENSMUST00000084838 Ap3b2Q9JME5 1082 aa23.17■■□□□ 1.3
Cd47-201ENSMUST00000084838 Cc2d2bA0A286YDU8 1405 aa23.16■■□□□ 1.3
Cd47-201ENSMUST00000084838 Q3TQI7 289 aaKnown RBP23.16■■□□□ 1.3
Cd47-201ENSMUST00000084838 Mak16Q8BGS0 296 aaKnown RBP23.16■■□□□ 1.3
Cd47-201ENSMUST00000084838 KnstrnQ9D9Z1 312 aaKnown RBP23.14■■□□□ 1.3
Cd47-201ENSMUST00000084838 Dbr1Q923B1 550 aa23.14■■□□□ 1.3
Cd47-201ENSMUST00000084838 Sart3Q9JLI8 962 aaKnown RBP23.14■■□□□ 1.3
Cd47-201ENSMUST00000084838 Slc4a1apE9PX68 744 aa23.13■■□□□ 1.29
Cd47-201ENSMUST00000084838 Ppm1gQ61074 542 aa23.13■■□□□ 1.29
Cd47-201ENSMUST00000084838 Tdrd9Q14BI7 1383 aa23.13■■□□□ 1.29
Cd47-201ENSMUST00000084838 Tmco5bQ80X59 307 aa23.09■■□□□ 1.29
Cd47-201ENSMUST00000084838 Urb2E9Q7L1 1524 aaKnown RBP23.08■■□□□ 1.29
Cd47-201ENSMUST00000084838 Ecm2Q5FW85 670 aa23.08■■□□□ 1.28
Cd47-201ENSMUST00000084838 Htatsf1Q8BGC0 757 aa23.08■■□□□ 1.28
Cd47-201ENSMUST00000084838 Clstn1Q9EPL2 979 aa23.07■■□□□ 1.28
Cd47-201ENSMUST00000084838 Q8BT18 775 aa23.07■■□□□ 1.28
Cd47-201ENSMUST00000084838 Usp47Q8BY87 1376 aa23.07■■□□□ 1.28
Cd47-201ENSMUST00000084838 Nol10Q5RJG1 687 aaKnown RBP23.06■■□□□ 1.28
Cd47-201ENSMUST00000084838 Shq1Q7TMX5 569 aa23.06■■□□□ 1.28
Cd47-201ENSMUST00000084838 Tnnt1O88346 262 aa23.05■■□□□ 1.28
Cd47-201ENSMUST00000084838 Plcb2A3KGF7 1181 aa23.04■■□□□ 1.28
Cd47-201ENSMUST00000084838 B4galnt3Q6L8S8 986 aa23.04■■□□□ 1.28
Cd47-201ENSMUST00000084838 Trim44Q9QXA7 346 aa23.04■■□□□ 1.28
Cd47-201ENSMUST00000084838 MccE9PWI3 1003 aa23.03■■□□□ 1.28
Cd47-201ENSMUST00000084838 Shroom4Q1W617 1475 aa23.03■■□□□ 1.28
Cd47-201ENSMUST00000084838 Sh3bp5Q9Z131 463 aa23.02■■□□□ 1.28
Cd47-201ENSMUST00000084838 Pde3bQ61409 1100 aa23.02■■□□□ 1.28
Cd47-201ENSMUST00000084838 PnnO35691 725 aaKnown RBP23.02■■□□□ 1.27
Cd47-201ENSMUST00000084838 PtmaP26350 111 aa23.01■■□□□ 1.27
Cd47-201ENSMUST00000084838 Usp40Q8BWR4 1235 aa22.99■■□□□ 1.27
Cd47-201ENSMUST00000084838 Rad54l2Q99NG0 1466 aa22.99■■□□□ 1.27
Cd47-201ENSMUST00000084838 Polr1aO35134 1717 aaKnown RBP22.99■■□□□ 1.27
Cd47-201ENSMUST00000084838 Cabp4Q8VHC5 271 aa22.97■■□□□ 1.27
Cd47-201ENSMUST00000084838 Pak3Q61036 559 aa22.95■■□□□ 1.26
Cd47-201ENSMUST00000084838 Nsd2Q8BVE8 1365 aa22.95■■□□□ 1.26
Cd47-201ENSMUST00000084838 Chmp5Q9D7S9 219 aa22.95■■□□□ 1.26
Cd47-201ENSMUST00000084838 ErbinQ80TH2 1402 aa22.95■■□□□ 1.26
Cd47-201ENSMUST00000084838 Top2aQ01320 1528 aaKnown RBP22.95■■□□□ 1.26
Cd47-201ENSMUST00000084838 Pank3Q8R2W9 370 aa22.94■■□□□ 1.26
Cd47-201ENSMUST00000084838 Ccdc9Q8VC31 543 aaKnown RBP22.94■■□□□ 1.26
Cd47-201ENSMUST00000084838 Duox2A2AQ99 1517 aa22.94■■□□□ 1.26
Cd47-201ENSMUST00000084838 Prdm16A2A935 1275 aa22.94■■□□□ 1.26
Cd47-201ENSMUST00000084838 CatipB9EKE5 520 aa22.93■■□□□ 1.26
Cd47-201ENSMUST00000084838 Rassf8Q8CJ96 419 aa22.93■■□□□ 1.26
Cd47-201ENSMUST00000084838 Tsen2Q6P7W5 460 aa22.92■■□□□ 1.26
Cd47-201ENSMUST00000084838 Stk31Q99MW1 1018 aa22.92■■□□□ 1.26
Cd47-201ENSMUST00000084838 Ksr2Q3UVC0 959 aa22.92■■□□□ 1.26
Cd47-201ENSMUST00000084838 Ccar1Q8CH18 1146 aaKnown RBP22.92■■□□□ 1.26
Cd47-201ENSMUST00000084838 Cux1P53564 1515 aa22.92■■□□□ 1.26
Cd47-201ENSMUST00000084838 Fgd6Q69ZL1 1399 aa22.91■■□□□ 1.26
Cd47-201ENSMUST00000084838 CrbnQ8C7D2 445 aa22.9■■□□□ 1.26
Cd47-201ENSMUST00000084838 Mink1Q9JM52 1308 aa22.9■■□□□ 1.26
Cd47-201ENSMUST00000084838 Mrc2Q64449 1479 aa22.9■■□□□ 1.26
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms