RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Slc4a3P16283 1227 aa17.54■□□□□ 0.4
Col5a1-201ENSMUST00000028280 VgfQ0VGU4 617 aa17.54■□□□□ 0.4
Col5a1-201ENSMUST00000028280 Rwdd1Q9CQK7 243 aa17.54■□□□□ 0.4
Col5a1-201ENSMUST00000028280 HnrnpuQ8VEK3 800 aaKnown RBP17.53■□□□□ 0.4
Col5a1-201ENSMUST00000028280 CgnP59242 1191 aa17.53■□□□□ 0.4
Col5a1-201ENSMUST00000028280 Ipo9Q91YE6 1041 aa17.53■□□□□ 0.4
Col5a1-201ENSMUST00000028280 Mtus2Q3UHD3 1353 aa17.53■□□□□ 0.4
Col5a1-201ENSMUST00000028280 Prm3Q62100 101 aa17.53■□□□□ 0.4
Col5a1-201ENSMUST00000028280 Aebp2Q9Z248 504 aaKnown RBP17.53■□□□□ 0.4
Col5a1-201ENSMUST00000028280 R3hcc1Q8BSI6 488 aa17.51■□□□□ 0.39
Col5a1-201ENSMUST00000028280 Iffo2Q8R2V2 512 aa17.51■□□□□ 0.39
Col5a1-201ENSMUST00000028280 SafbD3YXK2 937 aaKnown RBP17.51■□□□□ 0.39
Col5a1-201ENSMUST00000028280 Tpm3P21107 285 aaKnown RBP17.51■□□□□ 0.39
Col5a1-201ENSMUST00000028280 Golga3P55937 1487 aa17.5■□□□□ 0.39
Col5a1-201ENSMUST00000028280 Fbxo2Q80UW2 297 aa17.49■□□□□ 0.39
Col5a1-201ENSMUST00000028280 Chmp5Q9D7S9 219 aa17.49■□□□□ 0.39
Col5a1-201ENSMUST00000028280 4933402E13RikQ9D4D2 429 aa17.49■□□□□ 0.39
Col5a1-201ENSMUST00000028280 EspnQ9ET47 871 aa17.48■□□□□ 0.39
Col5a1-201ENSMUST00000028280 Stag3O70576 1240 aa17.48■□□□□ 0.39
Col5a1-201ENSMUST00000028280 Pde3bQ61409 1100 aa17.47■□□□□ 0.39
Col5a1-201ENSMUST00000028280 Dnai2A2AC93 623 aa17.47■□□□□ 0.39
Col5a1-201ENSMUST00000028280 Fhad1A6PWD2 1420 aa17.47■□□□□ 0.39
Col5a1-201ENSMUST00000028280 Rsf1E9PWW9 1441 aaKnown RBP17.47■□□□□ 0.39
Col5a1-201ENSMUST00000028280 NacadQ5SWP3 1504 aa17.46■□□□□ 0.39
Col5a1-201ENSMUST00000028280 Slc4a1apE9PX68 744 aa17.45■□□□□ 0.38
Col5a1-201ENSMUST00000028280 Gtf3c3Q3TMP1 882 aa17.45■□□□□ 0.38
Col5a1-201ENSMUST00000028280 Ush1cQ9ES64 910 aa17.45■□□□□ 0.38
Col5a1-201ENSMUST00000028280 Supt16hQ920B9 1047 aa17.45■□□□□ 0.38
Col5a1-201ENSMUST00000028280 Pknox2Q8BG99 474 aa17.44■□□□□ 0.38
Col5a1-201ENSMUST00000028280 Ercc6F8VPZ5 1481 aa17.44■□□□□ 0.38
Col5a1-201ENSMUST00000028280 Cspp1B2RX88 1205 aa17.43■□□□□ 0.38
Col5a1-201ENSMUST00000028280 Smarce1O54941 411 aaKnown RBP17.43■□□□□ 0.38
Col5a1-201ENSMUST00000028280 Dusp9Q7TNL7 452 aa17.43■□□□□ 0.38
Col5a1-201ENSMUST00000028280 SlkO54988 1233 aa17.42■□□□□ 0.38
Col5a1-201ENSMUST00000028280 Eif4g2Q62448 906 aaKnown RBP17.41■□□□□ 0.38
Col5a1-201ENSMUST00000028280 Isy1Q69ZQ2 285 aaKnown RBP17.4■□□□□ 0.38
Col5a1-201ENSMUST00000028280 Sart3Q9JLI8 962 aaKnown RBP17.4■□□□□ 0.38
Col5a1-201ENSMUST00000028280 Ipo8Q7TMY7 1010 aa17.4■□□□□ 0.38
Col5a1-201ENSMUST00000028280 Kif15Q6P9L6 1387 aa17.38■□□□□ 0.37
Col5a1-201ENSMUST00000028280 CrebrfQ8CDG5 640 aaKnown RBP17.38■□□□□ 0.37
Col5a1-201ENSMUST00000028280 Zrsr2Q62377 462 aaKnown RBP17.38■□□□□ 0.37
Col5a1-201ENSMUST00000028280 NgefQ8CHT1 710 aa17.37■□□□□ 0.37
Col5a1-201ENSMUST00000028280 Arid4aF8VPQ2 1261 aaKnown RBP17.36■□□□□ 0.37
Col5a1-201ENSMUST00000028280 MecomP14404 1042 aa17.36■□□□□ 0.37
Col5a1-201ENSMUST00000028280 Ccdc34Q3UI66 367 aa17.36■□□□□ 0.37
Col5a1-201ENSMUST00000028280 Taf3Q5HZG4 932 aa17.36■□□□□ 0.37
Col5a1-201ENSMUST00000028280 Mical1Q8VDP3 1048 aa17.35■□□□□ 0.37
Col5a1-201ENSMUST00000028280 Mfap1aC0HKD8 439 aaKnown RBP17.34■□□□□ 0.37
Col5a1-201ENSMUST00000028280 Mfap1bC0HKD9 439 aaKnown RBP17.34■□□□□ 0.37
Col5a1-201ENSMUST00000028280 Rrp7aQ9D1C9 280 aaKnown RBP17.34■□□□□ 0.37
Col5a1-201ENSMUST00000028280 Tpd52l1O54818 204 aa17.33■□□□□ 0.36
Col5a1-201ENSMUST00000028280 Arhgap27A2AB59 869 aa17.32■□□□□ 0.36
Col5a1-201ENSMUST00000028280 Tmf1B9EKI3 1091 aa17.32■□□□□ 0.36
Col5a1-201ENSMUST00000028280 Rtf1A2AQ19 715 aaKnown RBP17.32■□□□□ 0.36
Col5a1-201ENSMUST00000028280 Ccer1Q9CQL2 403 aa17.31■□□□□ 0.36
Col5a1-201ENSMUST00000028280 Tpm4Q6IRU2 248 aa17.31■□□□□ 0.36
Col5a1-201ENSMUST00000028280 Tpm1P58771 284 aa17.3■□□□□ 0.36
Col5a1-201ENSMUST00000028280 Stk24Q99KH8 431 aa17.3■□□□□ 0.36
Col5a1-201ENSMUST00000028280 Nol10Q5RJG1 687 aaKnown RBP17.29■□□□□ 0.36
Col5a1-201ENSMUST00000028280 Atp6v1dP57746 247 aa17.29■□□□□ 0.36
Col5a1-201ENSMUST00000028280 U2surpQ6NV83 1029 aaKnown RBP17.27■□□□□ 0.36
Col5a1-201ENSMUST00000028280 Tomm22Q9CPQ3 142 aa17.27■□□□□ 0.36
Col5a1-201ENSMUST00000028280 GorabQ8BRM2 368 aa17.27■□□□□ 0.36
Col5a1-201ENSMUST00000028280 CalrP14211 416 aaKnown RBP17.27■□□□□ 0.35
Col5a1-201ENSMUST00000028280 Rsph3aQ3UFY4 516 aa17.27■□□□□ 0.35
Col5a1-201ENSMUST00000028280 Sf3a1Q8K4Z5 791 aaKnown RBP17.27■□□□□ 0.35
Col5a1-201ENSMUST00000028280 IbspQ61711 324 aa17.26■□□□□ 0.35
Col5a1-201ENSMUST00000028280 Tpm2P58774 284 aa17.26■□□□□ 0.35
Col5a1-201ENSMUST00000028280 Drc7Q6V3W6 876 aa17.25■□□□□ 0.35
Col5a1-201ENSMUST00000028280 Anp32eP97822 260 aaKnown RBP17.23■□□□□ 0.35
Col5a1-201ENSMUST00000028280 Speer4f1Q9D5Q6 258 aa17.23■□□□□ 0.35
Col5a1-201ENSMUST00000028280 Tmco5bQ80X59 307 aa17.22■□□□□ 0.35
Col5a1-201ENSMUST00000028280 Vps53Q8CCB4 832 aa17.22■□□□□ 0.35
Col5a1-201ENSMUST00000028280 Fam193aQ8CGI1 1231 aaKnown RBP17.22■□□□□ 0.35
Col5a1-201ENSMUST00000028280 Cnga1P29974 684 aa17.21■□□□□ 0.35
Col5a1-201ENSMUST00000028280 Rufy1Q8BIJ7 712 aa17.21■□□□□ 0.35
Col5a1-201ENSMUST00000028280 Glipr1l2Q9CQ35 332 aa17.21■□□□□ 0.34
Col5a1-201ENSMUST00000028280 Zscan21Q07231 555 aa17.2■□□□□ 0.34
Col5a1-201ENSMUST00000028280 Cluap1Q8R3P7 413 aa17.19■□□□□ 0.34
Col5a1-201ENSMUST00000028280 Gabpb2P81069 414 aa17.19■□□□□ 0.34
Col5a1-201ENSMUST00000028280 Chaf1aQ9QWF0 911 aa17.19■□□□□ 0.34
Col5a1-201ENSMUST00000028280 Znf771Q8BJ90 317 aa17.19■□□□□ 0.34
Col5a1-201ENSMUST00000028280 Ccdc47Q9D024 483 aaKnown RBP17.19■□□□□ 0.34
Col5a1-201ENSMUST00000028280 Ralbp1Q62172 648 aa17.19■□□□□ 0.34
Col5a1-201ENSMUST00000028280 Brpf1B2RRD7 1212 aa17.19■□□□□ 0.34
Col5a1-201ENSMUST00000028280 Rundc1Q0VDN7 615 aa17.18■□□□□ 0.34
Col5a1-201ENSMUST00000028280 Ipo4Q8VI75 1082 aa17.18■□□□□ 0.34
Col5a1-201ENSMUST00000028280 Cwc15Q9JHS9 229 aaKnown RBP17.18■□□□□ 0.34
Col5a1-201ENSMUST00000028280 Pnmal2G3X9N3 661 aa17.18■□□□□ 0.34
Col5a1-201ENSMUST00000028280 Utp3Q9JI13 469 aaKnown RBP17.17■□□□□ 0.34
Col5a1-201ENSMUST00000028280 Arhgap35Q91YM2 1499 aa17.17■□□□□ 0.34
Col5a1-201ENSMUST00000028280 Spag9Q58A65 1321 aaKnown RBP17.17■□□□□ 0.34
Col5a1-201ENSMUST00000028280 Znhit6Q3UFB2 460 aaKnown RBP17.17■□□□□ 0.34
Col5a1-201ENSMUST00000028280 St18Q80TY4 1045 aa17.16■□□□□ 0.34
Col5a1-201ENSMUST00000028280 Kri1Q8VDQ9 704 aaKnown RBP17.16■□□□□ 0.34
Col5a1-201ENSMUST00000028280 Ipo7Q9EPL8 1038 aaKnown RBP17.16■□□□□ 0.34
Col5a1-201ENSMUST00000028280 Fyco1Q8VDC1 1437 aa17.16■□□□□ 0.34
Col5a1-201ENSMUST00000028280 Golga2Q921M4 999 aa17.16■□□□□ 0.34
Col5a1-201ENSMUST00000028280 Samd1D3YXK1 519 aa17.15■□□□□ 0.34
Col5a1-201ENSMUST00000028280 ChgaP26339 463 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms