RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Rhox8Q6VSS7 320 aa23.71■■□□□ 1.39
Col5a1-201ENSMUST00000028280 Rpgrip1Q9EPQ2 1331 aa22.83■■□□□ 1.24
Col5a1-201ENSMUST00000028280 Cngb1E1AZ71 1325 aa22.82■■□□□ 1.24
Col5a1-201ENSMUST00000028280 Las1lA2BE28 776 aaKnown RBP22.64■■□□□ 1.21
Col5a1-201ENSMUST00000028280 Pelp1Q9DBD5 1123 aaKnown RBP22.51■■□□□ 1.19
Col5a1-201ENSMUST00000028280 Amer1Q7TS75 1132 aa21.91■■□□□ 1.1
Col5a1-201ENSMUST00000028280 Ehmt2Q9Z148 1263 aaKnown RBP21.9■■□□□ 1.1
Col5a1-201ENSMUST00000028280 Wdr66E9Q743 1299 aa21.82■■□□□ 1.08
Col5a1-201ENSMUST00000028280 Zeb1Q64318 1117 aa21.46■■□□□ 1.03
Col5a1-201ENSMUST00000028280 Ube2uB1AUC4 352 aa21.39■■□□□ 1.01
Col5a1-201ENSMUST00000028280 CenpbP27790 599 aa21.37■■□□□ 1.01
Col5a1-201ENSMUST00000028280 4930567H17RikQ3V0K5 233 aa21.31■■□□□ 1
Col5a1-201ENSMUST00000028280 Esf1Q3V1V3 845 aaKnown RBP21■□□□□ 0.95
Col5a1-201ENSMUST00000028280 Rtl1Q7M732 1744 aa20.98■□□□□ 0.95
Col5a1-201ENSMUST00000028280 Ttbk1Q6PCN3 1308 aa20.91■□□□□ 0.94
Col5a1-201ENSMUST00000028280 Stra8P70278 393 aa20.9■□□□□ 0.94
Col5a1-201ENSMUST00000028280 Ccdc136Q3TVA9 1136 aa20.88■□□□□ 0.93
Col5a1-201ENSMUST00000028280 Myt1Q8CFC2 1127 aa20.74■□□□□ 0.91
Col5a1-201ENSMUST00000028280 4933416C03RikQ3V063 378 aa20.7■□□□□ 0.9
Col5a1-201ENSMUST00000028280 Npm2Q80W85 207 aa20.68■□□□□ 0.9
Col5a1-201ENSMUST00000028280 Ccdc180J3QNE4 1664 aa20.68■□□□□ 0.9
Col5a1-201ENSMUST00000028280 Trim41Q5NCC3 630 aa20.68■□□□□ 0.9
Col5a1-201ENSMUST00000028280 Gab3Q8BSM5 595 aa20.63■□□□□ 0.89
Col5a1-201ENSMUST00000028280 Slc24a1Q91WD8 1130 aa20.63■□□□□ 0.89
Col5a1-201ENSMUST00000028280 Myt1lP97500 1187 aa20.45■□□□□ 0.86
Col5a1-201ENSMUST00000028280 NefmP08553 848 aa20.45■□□□□ 0.86
Col5a1-201ENSMUST00000028280 Acin1Q9JIX8 1338 aaKnown RBP20.44■□□□□ 0.86
Col5a1-201ENSMUST00000028280 NischQ80TM9 1593 aa20.41■□□□□ 0.86
Col5a1-201ENSMUST00000028280 Cdk11bP24788 784 aaKnown RBP20.28■□□□□ 0.84
Col5a1-201ENSMUST00000028280 NeflP08551 543 aa20.26■□□□□ 0.83
Col5a1-201ENSMUST00000028280 Tnnt3Q9QZ47 272 aa20.2■□□□□ 0.82
Col5a1-201ENSMUST00000028280 UbtfP25976 765 aaKnown RBP20.19■□□□□ 0.82
Col5a1-201ENSMUST00000028280 NrdcQ8BHG1 1161 aa20.1■□□□□ 0.81
Col5a1-201ENSMUST00000028280 Rtl5Q5DTT4 599 aa20.07■□□□□ 0.8
Col5a1-201ENSMUST00000028280 Anp32bQ9EST5 272 aaKnown RBP20.06■□□□□ 0.8
Col5a1-201ENSMUST00000028280 HrcG5E8J6 738 aa20.02■□□□□ 0.79
Col5a1-201ENSMUST00000028280 Eif5bQ05D44 1216 aaKnown RBP19.97■□□□□ 0.79
Col5a1-201ENSMUST00000028280 DiexfQ8BTT6 772 aaKnown RBP19.95■□□□□ 0.78
Col5a1-201ENSMUST00000028280 Nop58Q6DFW4 536 aaKnown RBP19.93■□□□□ 0.78
Col5a1-201ENSMUST00000028280 Pcgf6Q99NA9 353 aa19.91■□□□□ 0.78
Col5a1-201ENSMUST00000028280 NclP09405 707 aaKnown RBP19.76■□□□□ 0.75
Col5a1-201ENSMUST00000028280 DaxxO35613 739 aa19.68■□□□□ 0.74
Col5a1-201ENSMUST00000028280 Neurod1Q60867 357 aa19.68■□□□□ 0.74
Col5a1-201ENSMUST00000028280 Os9Q8K2C7 672 aa19.62■□□□□ 0.73
Col5a1-201ENSMUST00000028280 Fam50aQ9WV03 339 aaKnown RBP19.54■□□□□ 0.72
Col5a1-201ENSMUST00000028280 Ppargc1bQ8VHJ7 1014 aa19.5■□□□□ 0.71
Col5a1-201ENSMUST00000028280 CatipB9EKE5 520 aa19.47■□□□□ 0.71
Col5a1-201ENSMUST00000028280 Anp32aO35381 247 aa19.45■□□□□ 0.7
Col5a1-201ENSMUST00000028280 Supt5hO55201 1082 aaKnown RBP19.42■□□□□ 0.7
Col5a1-201ENSMUST00000028280 Ythdc1E9Q5K9 736 aaKnown RBP19.41■□□□□ 0.7
Col5a1-201ENSMUST00000028280 TonslQ6NZL6 1363 aa19.4■□□□□ 0.7
Col5a1-201ENSMUST00000028280 Il27Q8K3I6 234 aa19.37■□□□□ 0.69
Col5a1-201ENSMUST00000028280 Ap3b1Q9Z1T1 1105 aa19.27■□□□□ 0.68
Col5a1-201ENSMUST00000028280 Zcchc6Q5BLK4 1491 aaKnown RBP19.18■□□□□ 0.66
Col5a1-201ENSMUST00000028280 Lmod3E9QA62 571 aa19.15■□□□□ 0.66
Col5a1-201ENSMUST00000028280 Upf2A2AT37 1269 aaKnown RBP19.14■□□□□ 0.66
Col5a1-201ENSMUST00000028280 ArxO35085 564 aa19.14■□□□□ 0.65
Col5a1-201ENSMUST00000028280 ClspnQ80YR7 1315 aa19.04■□□□□ 0.64
Col5a1-201ENSMUST00000028280 Polr3glQ8R0C0 218 aa19■□□□□ 0.63
Col5a1-201ENSMUST00000028280 Nlrp6Q91WS2 869 aa19■□□□□ 0.63
Col5a1-201ENSMUST00000028280 Mier1Q5UAK0 511 aa18.98■□□□□ 0.63
Col5a1-201ENSMUST00000028280 Chic1Q8CBW7 227 aa18.93■□□□□ 0.62
Col5a1-201ENSMUST00000028280 Hsp90aa1P07901 733 aaKnown RBP18.92■□□□□ 0.62
Col5a1-201ENSMUST00000028280 Gm38655A0A286YDK6 273 aa18.88■□□□□ 0.61
Col5a1-201ENSMUST00000028280 Ccdc9Q8VC31 543 aaKnown RBP18.86■□□□□ 0.61
Col5a1-201ENSMUST00000028280 Hdac5Q9Z2V6 1113 aa18.86■□□□□ 0.61
Col5a1-201ENSMUST00000028280 Zbtb7cQ8VCZ7 619 aa18.84■□□□□ 0.61
Col5a1-201ENSMUST00000028280 Csrnp3P59055 597 aa18.83■□□□□ 0.6
Col5a1-201ENSMUST00000028280 Trim44Q9QXA7 346 aa18.81■□□□□ 0.6
Col5a1-201ENSMUST00000028280 Gm35339A0A140LHH9 1649 aa18.8■□□□□ 0.6
Col5a1-201ENSMUST00000028280 DekQ7TNV0 380 aaKnown RBP18.8■□□□□ 0.6
Col5a1-201ENSMUST00000028280 Hnrnpul2Q00PI9 745 aaKnown RBP18.77■□□□□ 0.6
Col5a1-201ENSMUST00000028280 Aplp2Q06335 707 aa18.76■□□□□ 0.59
Col5a1-201ENSMUST00000028280 Ppp4r2Q0VGB7 417 aa18.75■□□□□ 0.59
Col5a1-201ENSMUST00000028280 Gm13697A2AK42 830 aa18.75■□□□□ 0.59
Col5a1-201ENSMUST00000028280 Zbtb4Q5F293 982 aa18.74■□□□□ 0.59
Col5a1-201ENSMUST00000028280 Abcc9P70170 1546 aa18.74■□□□□ 0.59
Col5a1-201ENSMUST00000028280 Anks4bQ8K3X6 423 aa18.74■□□□□ 0.59
Col5a1-201ENSMUST00000028280 Calr4Q3TQS0 420 aa18.7■□□□□ 0.58
Col5a1-201ENSMUST00000028280 Prdm10Q3UTQ7 1184 aa18.68■□□□□ 0.58
Col5a1-201ENSMUST00000028280 Atp1b4Q99ME6 356 aa18.67■□□□□ 0.58
Col5a1-201ENSMUST00000028280 Vsig10D3YX43 558 aa18.66■□□□□ 0.58
Col5a1-201ENSMUST00000028280 Mapk8ip2Q9ERE9 830 aa18.66■□□□□ 0.58
Col5a1-201ENSMUST00000028280 Plekhg3Q4VAC9 1341 aa18.64■□□□□ 0.57
Col5a1-201ENSMUST00000028280 Npm1Q61937 292 aaKnown RBP18.62■□□□□ 0.57
Col5a1-201ENSMUST00000028280 Erich6D3Z6S9 713 aa18.62■□□□□ 0.57
Col5a1-201ENSMUST00000028280 Lmod2Q3UHZ5 550 aa18.6■□□□□ 0.57
Col5a1-201ENSMUST00000028280 Wdr43Q6ZQL4 677 aaKnown RBP18.56■□□□□ 0.56
Col5a1-201ENSMUST00000028280 Rangap1P46061 589 aaKnown RBP18.55■□□□□ 0.56
Col5a1-201ENSMUST00000028280 Dcaf1Q80TR8 1506 aa18.51■□□□□ 0.55
Col5a1-201ENSMUST00000028280 PtmaP26350 111 aa18.5■□□□□ 0.55
Col5a1-201ENSMUST00000028280 Ccer2J3QPU5 274 aa18.49■□□□□ 0.55
Col5a1-201ENSMUST00000028280 Gm13695A2AK44 830 aa18.48■□□□□ 0.55
Col5a1-201ENSMUST00000028280 Hsp90ab1P11499 724 aaKnown RBP18.43■□□□□ 0.54
Col5a1-201ENSMUST00000028280 CanxP35564 591 aaKnown RBP18.41■□□□□ 0.54
Col5a1-201ENSMUST00000028280 Rad21Q61550 635 aaKnown RBP18.4■□□□□ 0.54
Col5a1-201ENSMUST00000028280 Brd4Q9ESU6 1400 aaKnown RBP18.38■□□□□ 0.53
Col5a1-201ENSMUST00000028280 Adam1bQ8R534 806 aa18.38■□□□□ 0.53
Col5a1-201ENSMUST00000028280 Clip1Q922J3 1391 aa18.38■□□□□ 0.53
Col5a1-201ENSMUST00000028280 Fgd1P52734 960 aa18.36■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 143 ms