RNA–Protein interactions for RNA: ENSMUST00000027438.7

Ncl-201, Transcript of Nucleolin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncl, Length 8,202 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncl-201ENSMUST00000027438 Myt1Q8CFC2 1127 aa8.76□□□□□ -1.01
Ncl-201ENSMUST00000027438 Podxl2Q8CAE9 603 aa8.76□□□□□ -1.01
Ncl-201ENSMUST00000027438 Eva1cP58659 440 aa8.76□□□□□ -1.01
Ncl-201ENSMUST00000027438 Gtpbp6Q3U6U5 514 aa8.76□□□□□ -1.01
Ncl-201ENSMUST00000027438 Mical1Q8VDP3 1048 aa8.75□□□□□ -1.01
Ncl-201ENSMUST00000027438 AdnpQ9Z103 1108 aaKnown RBP8.75□□□□□ -1.01
Ncl-201ENSMUST00000027438 Hsp90b1P08113 802 aaKnown RBP8.74□□□□□ -1.01
Ncl-201ENSMUST00000027438 Chic2Q9D9G3 165 aa8.74□□□□□ -1.01
Ncl-201ENSMUST00000027438 Rbm5Q91YE7 815 aaKnown RBP8.72□□□□□ -1.01
Ncl-201ENSMUST00000027438 Phf23Q8BSN5 401 aa8.72□□□□□ -1.01
Ncl-201ENSMUST00000027438 ChgaP26339 463 aaKnown RBP8.72□□□□□ -1.01
Ncl-201ENSMUST00000027438 Tpm4Q6IRU2 248 aa8.71□□□□□ -1.01
Ncl-201ENSMUST00000027438 Ppp1r1bQ60829 194 aa8.71□□□□□ -1.01
Ncl-201ENSMUST00000027438 Hdgfl1Q2VPR5 283 aa8.71□□□□□ -1.02
Ncl-201ENSMUST00000027438 Mroh3A0A1D5RM54 893 aa8.71□□□□□ -1.02
Ncl-201ENSMUST00000027438 Ccdc180J3QNE4 1664 aa8.69□□□□□ -1.02
Ncl-201ENSMUST00000027438 Tulp1Q9Z273 543 aa8.69□□□□□ -1.02
Ncl-201ENSMUST00000027438 Arid3cA6PWV5 409 aa8.69□□□□□ -1.02
Ncl-201ENSMUST00000027438 Krt82Q99M74 516 aa8.69□□□□□ -1.02
Ncl-201ENSMUST00000027438 Noc2lQ9WV70 747 aaKnown RBP8.69□□□□□ -1.02
Ncl-201ENSMUST00000027438 Wdr78E9PYY5 807 aa8.68□□□□□ -1.02
Ncl-201ENSMUST00000027438 Stk26Q99JT2 416 aa8.68□□□□□ -1.02
Ncl-201ENSMUST00000027438 TprnA2AI08 749 aaKnown RBP8.68□□□□□ -1.02
Ncl-201ENSMUST00000027438 Wwc2Q6NXJ0 1187 aa8.68□□□□□ -1.02
Ncl-201ENSMUST00000027438 Rtl1Q7M732 1744 aa8.68□□□□□ -1.02
Ncl-201ENSMUST00000027438 Ap3b2Q9JME5 1082 aa8.68□□□□□ -1.02
Ncl-201ENSMUST00000027438 WdpcpQ8C456 722 aa8.67□□□□□ -1.02
Ncl-201ENSMUST00000027438 Sytl4Q9R0Q1 673 aa8.67□□□□□ -1.02
Ncl-201ENSMUST00000027438 Cetn4Q8K4K1 168 aa8.67□□□□□ -1.02
Ncl-201ENSMUST00000027438 Ppp4r3bQ922R5 820 aa8.67□□□□□ -1.02
Ncl-201ENSMUST00000027438 U2surpQ6NV83 1029 aaKnown RBP8.67□□□□□ -1.02
Ncl-201ENSMUST00000027438 Sirt1Q923E4 737 aa8.66□□□□□ -1.02
Ncl-201ENSMUST00000027438 Atf3Q60765 181 aa8.66□□□□□ -1.02
Ncl-201ENSMUST00000027438 Ccdc47Q9D024 483 aaKnown RBP8.66□□□□□ -1.02
Ncl-201ENSMUST00000027438 Znf697Q569E7 569 aa8.66□□□□□ -1.02
Ncl-201ENSMUST00000027438 Q3TQI7 289 aaKnown RBP8.65□□□□□ -1.02
Ncl-201ENSMUST00000027438 Casc1Q6TDU8 730 aa8.65□□□□□ -1.02
Ncl-201ENSMUST00000027438 Frat2Q8K025 231 aa8.65□□□□□ -1.02
Ncl-201ENSMUST00000027438 Cnga1P29974 684 aa8.65□□□□□ -1.02
Ncl-201ENSMUST00000027438 Ftsj3Q9DBE9 838 aaKnown RBP8.65□□□□□ -1.02
Ncl-201ENSMUST00000027438 MecomP14404 1042 aa8.65□□□□□ -1.02
Ncl-201ENSMUST00000027438 Tmem87aQ8BXN9 555 aa8.65□□□□□ -1.02
Ncl-201ENSMUST00000027438 Rrp7aQ9D1C9 280 aaKnown RBP8.65□□□□□ -1.03
Ncl-201ENSMUST00000027438 MccE9PWI3 1003 aa8.64□□□□□ -1.03
Ncl-201ENSMUST00000027438 Ipo9Q91YE6 1041 aa8.64□□□□□ -1.03
Ncl-201ENSMUST00000027438 Iffo2Q8R2V2 512 aa8.64□□□□□ -1.03
Ncl-201ENSMUST00000027438 Arid4aF8VPQ2 1261 aaKnown RBP8.64□□□□□ -1.03
Ncl-201ENSMUST00000027438 Aebp2Q9Z248 504 aaKnown RBP8.63□□□□□ -1.03
Ncl-201ENSMUST00000027438 Tpd52l1O54818 204 aa8.62□□□□□ -1.03
Ncl-201ENSMUST00000027438 IkQ9Z1M8 557 aaKnown RBP8.62□□□□□ -1.03
Ncl-201ENSMUST00000027438 Ksr2Q3UVC0 959 aa8.62□□□□□ -1.03
Ncl-201ENSMUST00000027438 R3hcc1Q8BSI6 488 aa8.62□□□□□ -1.03
Ncl-201ENSMUST00000027438 Ddx54Q8K4L0 874 aaKnown RBP8.62□□□□□ -1.03
Ncl-201ENSMUST00000027438 Gm21969J3QJZ1 289 aa8.62□□□□□ -1.03
Ncl-201ENSMUST00000027438 CrbnQ8C7D2 445 aa8.62□□□□□ -1.03
Ncl-201ENSMUST00000027438 Trim30dE9PWL0 497 aa8.62□□□□□ -1.03
Ncl-201ENSMUST00000027438 Tpm2P58774 284 aa8.61□□□□□ -1.03
Ncl-201ENSMUST00000027438 Chmp4bQ9D8B3 224 aaKnown RBP8.61□□□□□ -1.03
Ncl-201ENSMUST00000027438 Kiaa1211Q5PR69 1207 aa8.61□□□□□ -1.03
Ncl-201ENSMUST00000027438 Znf704Q9ERQ3 566 aa8.61□□□□□ -1.03
Ncl-201ENSMUST00000027438 Pcmtd1P59913 357 aa8.61□□□□□ -1.03
Ncl-201ENSMUST00000027438 NudcO35685 332 aaKnown RBP8.6□□□□□ -1.03
Ncl-201ENSMUST00000027438 Adam1bQ8R534 806 aa8.6□□□□□ -1.03
Ncl-201ENSMUST00000027438 Armc3A2AU72 881 aa8.6□□□□□ -1.03
Ncl-201ENSMUST00000027438 Hsp90ab1P11499 724 aaKnown RBP8.6□□□□□ -1.03
Ncl-201ENSMUST00000027438 Fnbp4Q6ZQ03 1031 aa8.6□□□□□ -1.03
Ncl-201ENSMUST00000027438 UvssaQ9D479 717 aa8.6□□□□□ -1.03
Ncl-201ENSMUST00000027438 Rgl3Q3UYI5 709 aa8.6□□□□□ -1.03
Ncl-201ENSMUST00000027438 Ccp110Q7TSH4 1004 aa8.59□□□□□ -1.03
Ncl-201ENSMUST00000027438 Gm973E9Q295 1059 aa8.59□□□□□ -1.03
Ncl-201ENSMUST00000027438 Zpr1Q62384 459 aa8.59□□□□□ -1.03
Ncl-201ENSMUST00000027438 G430095P16RikE9Q913 147 aa8.59□□□□□ -1.03
Ncl-201ENSMUST00000027438 Plekhg5Q66T02 1073 aa8.59□□□□□ -1.03
Ncl-201ENSMUST00000027438 Wdhd1P59328 1117 aa8.59□□□□□ -1.03
Ncl-201ENSMUST00000027438 Ttc5Q99LG4 440 aa8.59□□□□□ -1.03
Ncl-201ENSMUST00000027438 March6Q6ZQ89 909 aa8.58□□□□□ -1.04
Ncl-201ENSMUST00000027438 Spag9Q58A65 1321 aaKnown RBP8.58□□□□□ -1.04
Ncl-201ENSMUST00000027438 Sart3Q9JLI8 962 aaKnown RBP8.58□□□□□ -1.04
Ncl-201ENSMUST00000027438 Znf219Q6IQX8 726 aa8.58□□□□□ -1.04
Ncl-201ENSMUST00000027438 SetQ9EQU5 289 aaKnown RBP8.58□□□□□ -1.04
Ncl-201ENSMUST00000027438 Pde3bQ61409 1100 aa8.58□□□□□ -1.04
Ncl-201ENSMUST00000027438 Ccdc27Q3V036 639 aa8.58□□□□□ -1.04
Ncl-201ENSMUST00000027438 Bcl11aQ9QYE3 773 aa8.58□□□□□ -1.04
Ncl-201ENSMUST00000027438 AppP12023 770 aa8.57□□□□□ -1.04
Ncl-201ENSMUST00000027438 AknaQ80VW7 1404 aa8.56□□□□□ -1.04
Ncl-201ENSMUST00000027438 Birc3O08863 600 aa8.56□□□□□ -1.04
Ncl-201ENSMUST00000027438 Sept11Q8C1B7 431 aaKnown RBP8.56□□□□□ -1.04
Ncl-201ENSMUST00000027438 MpndQ3TV65 487 aa8.55□□□□□ -1.04
Ncl-201ENSMUST00000027438 Pde3aQ9Z0X4 1141 aa8.55□□□□□ -1.04
Ncl-201ENSMUST00000027438 AU015836B2RUM3 263 aa8.55□□□□□ -1.04
Ncl-201ENSMUST00000027438 Nop9Q8BMC4 636 aaKnown RBP8.54□□□□□ -1.04
Ncl-201ENSMUST00000027438 Tpm3P21107 285 aaKnown RBP8.54□□□□□ -1.04
Ncl-201ENSMUST00000027438 Smc4Q8CG47 1286 aa8.53□□□□□ -1.04
Ncl-201ENSMUST00000027438 Brpf1B2RRD7 1212 aa8.53□□□□□ -1.04
Ncl-201ENSMUST00000027438 Psmd1Q3TXS7 953 aa8.53□□□□□ -1.04
Ncl-201ENSMUST00000027438 Fam193aQ8CGI1 1231 aaKnown RBP8.53□□□□□ -1.04
Ncl-201ENSMUST00000027438 Commd10Q8JZY2 202 aa8.53□□□□□ -1.04
Ncl-201ENSMUST00000027438 Slc5a4bQ91ZP4 660 aa8.53□□□□□ -1.04
Ncl-201ENSMUST00000027438 CgnP59242 1191 aa8.52□□□□□ -1.05
Ncl-201ENSMUST00000027438 Rnf216P58283 853 aa8.52□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms