RNA–Protein interactions for RNA: ENSMUST00000027438.7

Ncl-201, Transcript of Nucleolin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncl, Length 8,202 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncl-201ENSMUST00000027438 Rhox8Q6VSS7 320 aa11.88□□□□□ -0.51
Ncl-201ENSMUST00000027438 Ube2uB1AUC4 352 aa11.33□□□□□ -0.6
Ncl-201ENSMUST00000027438 Zeb1Q64318 1117 aa11.11□□□□□ -0.63
Ncl-201ENSMUST00000027438 Esf1Q3V1V3 845 aaKnown RBP10.94□□□□□ -0.66
Ncl-201ENSMUST00000027438 Pelp1Q9DBD5 1123 aaKnown RBP10.87□□□□□ -0.67
Ncl-201ENSMUST00000027438 Npm2Q80W85 207 aa10.69□□□□□ -0.7
Ncl-201ENSMUST00000027438 Cngb1E1AZ71 1325 aa10.66□□□□□ -0.7
Ncl-201ENSMUST00000027438 Plppr3Q7TPB0 716 aa10.6□□□□□ -0.71
Ncl-201ENSMUST00000027438 Gm13697A2AK42 830 aa10.53□□□□□ -0.72
Ncl-201ENSMUST00000027438 Wdr66E9Q743 1299 aa10.51□□□□□ -0.73
Ncl-201ENSMUST00000027438 DiexfQ8BTT6 772 aaKnown RBP10.49□□□□□ -0.73
Ncl-201ENSMUST00000027438 Os9Q8K2C7 672 aa10.49□□□□□ -0.73
Ncl-201ENSMUST00000027438 Amer1Q7TS75 1132 aa10.48□□□□□ -0.73
Ncl-201ENSMUST00000027438 Las1lA2BE28 776 aaKnown RBP10.48□□□□□ -0.73
Ncl-201ENSMUST00000027438 Ttbk1Q6PCN3 1308 aa10.46□□□□□ -0.74
Ncl-201ENSMUST00000027438 HrcG5E8J6 738 aa10.44□□□□□ -0.74
Ncl-201ENSMUST00000027438 Rpgrip1Q9EPQ2 1331 aa10.44□□□□□ -0.74
Ncl-201ENSMUST00000027438 Myt1lP97500 1187 aa10.43□□□□□ -0.74
Ncl-201ENSMUST00000027438 4930567H17RikQ3V0K5 233 aa10.43□□□□□ -0.74
Ncl-201ENSMUST00000027438 Gab3Q8BSM5 595 aa10.36□□□□□ -0.75
Ncl-201ENSMUST00000027438 Chic1Q8CBW7 227 aa10.35□□□□□ -0.75
Ncl-201ENSMUST00000027438 Slc24a1Q91WD8 1130 aa10.35□□□□□ -0.75
Ncl-201ENSMUST00000027438 Ehmt2Q9Z148 1263 aaKnown RBP10.34□□□□□ -0.75
Ncl-201ENSMUST00000027438 Ifnlr1Q8CGK5 535 aa10.28□□□□□ -0.76
Ncl-201ENSMUST00000027438 Gm13695A2AK44 830 aa10.24□□□□□ -0.77
Ncl-201ENSMUST00000027438 Cdk11bP24788 784 aaKnown RBP10.23□□□□□ -0.77
Ncl-201ENSMUST00000027438 Ccdc136Q3TVA9 1136 aa10.21□□□□□ -0.78
Ncl-201ENSMUST00000027438 Atp1b4Q99ME6 356 aa10.17□□□□□ -0.78
Ncl-201ENSMUST00000027438 Il27Q8K3I6 234 aa10.16□□□□□ -0.78
Ncl-201ENSMUST00000027438 Hdac5Q9Z2V6 1113 aa10.11□□□□□ -0.79
Ncl-201ENSMUST00000027438 Safb2Q80YR5 991 aaKnown RBP10.08□□□□□ -0.8
Ncl-201ENSMUST00000027438 Zbtb7cQ8VCZ7 619 aa10.05□□□□□ -0.8
Ncl-201ENSMUST00000027438 Anp32bQ9EST5 272 aaKnown RBP10.03□□□□□ -0.8
Ncl-201ENSMUST00000027438 NclP09405 707 aaKnown RBP10.02□□□□□ -0.81
Ncl-201ENSMUST00000027438 Neurod1Q60867 357 aa10□□□□□ -0.81
Ncl-201ENSMUST00000027438 Slc4a1apE9PX68 744 aa9.95□□□□□ -0.82
Ncl-201ENSMUST00000027438 Hnrnpul2Q00PI9 745 aaKnown RBP9.95□□□□□ -0.82
Ncl-201ENSMUST00000027438 Acin1Q9JIX8 1338 aaKnown RBP9.94□□□□□ -0.82
Ncl-201ENSMUST00000027438 Znf326O88291 580 aa9.91□□□□□ -0.82
Ncl-201ENSMUST00000027438 NeflP08551 543 aa9.88□□□□□ -0.83
Ncl-201ENSMUST00000027438 Erich6D3Z6S9 713 aa9.86□□□□□ -0.83
Ncl-201ENSMUST00000027438 Trim41Q5NCC3 630 aa9.85□□□□□ -0.83
Ncl-201ENSMUST00000027438 Stra8P70278 393 aa9.82□□□□□ -0.84
Ncl-201ENSMUST00000027438 Ap3b1Q9Z1T1 1105 aa9.81□□□□□ -0.84
Ncl-201ENSMUST00000027438 MyclP10166 368 aa9.8□□□□□ -0.84
Ncl-201ENSMUST00000027438 NrdcQ8BHG1 1161 aa9.79□□□□□ -0.84
Ncl-201ENSMUST00000027438 Ggt6Q6PDE7 497 aa9.79□□□□□ -0.84
Ncl-201ENSMUST00000027438 4933416C03RikQ3V063 378 aa9.78□□□□□ -0.84
Ncl-201ENSMUST00000027438 UbtfP25976 765 aaKnown RBP9.77□□□□□ -0.85
Ncl-201ENSMUST00000027438 Prdm10Q3UTQ7 1184 aa9.76□□□□□ -0.85
Ncl-201ENSMUST00000027438 Fam50aQ9WV03 339 aaKnown RBP9.76□□□□□ -0.85
Ncl-201ENSMUST00000027438 Ppm1fQ8CGA0 452 aa9.76□□□□□ -0.85
Ncl-201ENSMUST00000027438 Ecm2Q5FW85 670 aa9.69□□□□□ -0.86
Ncl-201ENSMUST00000027438 Eif5bQ05D44 1216 aaKnown RBP9.67□□□□□ -0.86
Ncl-201ENSMUST00000027438 Ythdc1E9Q5K9 736 aaKnown RBP9.67□□□□□ -0.86
Ncl-201ENSMUST00000027438 Polr3glQ8R0C0 218 aa9.67□□□□□ -0.86
Ncl-201ENSMUST00000027438 Hsp90aa1P07901 733 aaKnown RBP9.66□□□□□ -0.86
Ncl-201ENSMUST00000027438 Prm3Q62100 101 aa9.66□□□□□ -0.86
Ncl-201ENSMUST00000027438 Nlrp6Q91WS2 869 aa9.66□□□□□ -0.86
Ncl-201ENSMUST00000027438 Zbtb4Q5F293 982 aa9.65□□□□□ -0.86
Ncl-201ENSMUST00000027438 Fkbp15Q6P9Q6 1216 aaKnown RBP9.65□□□□□ -0.86
Ncl-201ENSMUST00000027438 P3h3Q8CG70 732 aa9.65□□□□□ -0.87
Ncl-201ENSMUST00000027438 CatipB9EKE5 520 aa9.62□□□□□ -0.87
Ncl-201ENSMUST00000027438 Clstn1Q9EPL2 979 aa9.59□□□□□ -0.87
Ncl-201ENSMUST00000027438 Ubap1lG3UW59 384 aa9.57□□□□□ -0.88
Ncl-201ENSMUST00000027438 Q8BT18 775 aa9.57□□□□□ -0.88
Ncl-201ENSMUST00000027438 Npm1Q61937 292 aaKnown RBP9.56□□□□□ -0.88
Ncl-201ENSMUST00000027438 Rangap1P46061 589 aaKnown RBP9.55□□□□□ -0.88
Ncl-201ENSMUST00000027438 Rtn4Q99P72 1162 aaKnown RBP9.55□□□□□ -0.88
Ncl-201ENSMUST00000027438 Irx6Q9ER75 438 aa9.54□□□□□ -0.88
Ncl-201ENSMUST00000027438 Lmod2Q3UHZ5 550 aa9.54□□□□□ -0.88
Ncl-201ENSMUST00000027438 Vsig10D3YX43 558 aa9.53□□□□□ -0.88
Ncl-201ENSMUST00000027438 Ppp4r2Q0VGB7 417 aa9.53□□□□□ -0.88
Ncl-201ENSMUST00000027438 Noc3lQ8VI84 807 aaKnown RBP9.52□□□□□ -0.89
Ncl-201ENSMUST00000027438 Hs1bp3Q3TC93 395 aa9.52□□□□□ -0.89
Ncl-201ENSMUST00000027438 NefmP08553 848 aa9.5□□□□□ -0.89
Ncl-201ENSMUST00000027438 MlecQ6ZQI3 291 aaKnown RBP9.46□□□□□ -0.9
Ncl-201ENSMUST00000027438 Grwd1Q810D6 446 aaKnown RBP9.46□□□□□ -0.9
Ncl-201ENSMUST00000027438 Skap1Q3UUV5 355 aa9.43□□□□□ -0.9
Ncl-201ENSMUST00000027438 Rtl5Q5DTT4 599 aa9.4□□□□□ -0.9
Ncl-201ENSMUST00000027438 Neurod2Q62414 383 aa9.4□□□□□ -0.9
Ncl-201ENSMUST00000027438 Fbln2P37889 1221 aa9.38□□□□□ -0.91
Ncl-201ENSMUST00000027438 Gm35339A0A140LHH9 1649 aa9.38□□□□□ -0.91
Ncl-201ENSMUST00000027438 Chrna2Q91X60 512 aa9.36□□□□□ -0.91
Ncl-201ENSMUST00000027438 ArxO35085 564 aa9.36□□□□□ -0.91
Ncl-201ENSMUST00000027438 Lmod3E9QA62 571 aa9.36□□□□□ -0.91
Ncl-201ENSMUST00000027438 CenpbP27790 599 aa9.35□□□□□ -0.91
Ncl-201ENSMUST00000027438 NgefQ8CHT1 710 aa9.34□□□□□ -0.91
Ncl-201ENSMUST00000027438 Fgd1P52734 960 aa9.34□□□□□ -0.92
Ncl-201ENSMUST00000027438 Aplp2Q06335 707 aa9.34□□□□□ -0.92
Ncl-201ENSMUST00000027438 Isy1Q69ZQ2 285 aaKnown RBP9.32□□□□□ -0.92
Ncl-201ENSMUST00000027438 Kcnn1Q9EQR3 537 aa9.32□□□□□ -0.92
Ncl-201ENSMUST00000027438 Trim26Q99PN3 545 aa9.31□□□□□ -0.92
Ncl-201ENSMUST00000027438 Mapk8ip2Q9ERE9 830 aa9.3□□□□□ -0.92
Ncl-201ENSMUST00000027438 Ppp1r18Q8BQ30 594 aa9.29□□□□□ -0.92
Ncl-201ENSMUST00000027438 Ciz1Q8VEH2 845 aa9.29□□□□□ -0.92
Ncl-201ENSMUST00000027438 Eif4g2Q62448 906 aaKnown RBP9.29□□□□□ -0.92
Ncl-201ENSMUST00000027438 1700123L14RikQ3V2K7 440 aa9.28□□□□□ -0.92
Ncl-201ENSMUST00000027438 Ripply1Q2WG77 201 aa9.28□□□□□ -0.92
Ncl-201ENSMUST00000027438 Paf1Q8K2T8 535 aa9.26□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 423 ms