RNA–Protein interactions for RNA: ENSMUST00000026072.3

Trub1-201, Transcript of Probable tRNA pseudouridine synthase 1, mousemouse

TSL 1 (best) BASIC

Gene Trub1, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1-201ENSMUST00000026072 Ifit1bl1D3Z6F0 470 aa10.55□□□□□ -0.72
Trub1-201ENSMUST00000026072 Hsp90b1P08113 802 aaKnown RBP10.55□□□□□ -0.72
Trub1-201ENSMUST00000026072 Stk26Q99JT2 416 aa10.55□□□□□ -0.72
Trub1-201ENSMUST00000026072 Smarca4Q3TKT4 1613 aaKnown RBP10.55□□□□□ -0.72
Trub1-201ENSMUST00000026072 Znf326O88291 580 aa10.55□□□□□ -0.72
Trub1-201ENSMUST00000026072 Kif27Q7M6Z4 1394 aa10.55□□□□□ -0.72
Trub1-201ENSMUST00000026072 Mia2Q91ZV0 1396 aa10.54□□□□□ -0.72
Trub1-201ENSMUST00000026072 U2surpQ6NV83 1029 aaKnown RBP10.54□□□□□ -0.72
Trub1-201ENSMUST00000026072 Tmco5bQ80X59 307 aa10.54□□□□□ -0.72
Trub1-201ENSMUST00000026072 Tcerg1Q8CGF7 1100 aaKnown RBP10.53□□□□□ -0.72
Trub1-201ENSMUST00000026072 Pes1Q9EQ61 584 aaKnown RBP10.53□□□□□ -0.72
Trub1-201ENSMUST00000026072 Cluap1Q8R3P7 413 aa10.52□□□□□ -0.72
Trub1-201ENSMUST00000026072 NudcO35685 332 aaKnown RBP10.52□□□□□ -0.73
Trub1-201ENSMUST00000026072 Map7O88735 730 aa10.52□□□□□ -0.73
Trub1-201ENSMUST00000026072 Rpap1Q80TE0 1409 aa10.51□□□□□ -0.73
Trub1-201ENSMUST00000026072 Zscan21Q07231 555 aa10.51□□□□□ -0.73
Trub1-201ENSMUST00000026072 Casc1Q6TDU8 730 aa10.51□□□□□ -0.73
Trub1-201ENSMUST00000026072 Iqcf3Q9D498 203 aa10.51□□□□□ -0.73
Trub1-201ENSMUST00000026072 U2af1Q9D883 239 aaKnown RBP10.5□□□□□ -0.73
Trub1-201ENSMUST00000026072 Znf330Q922H9 316 aa10.5□□□□□ -0.73
Trub1-201ENSMUST00000026072 Mphosph9A6H5Y1 991 aa10.49□□□□□ -0.73
Trub1-201ENSMUST00000026072 Birc3O08863 600 aa10.49□□□□□ -0.73
Trub1-201ENSMUST00000026072 Phldb1Q6PDH0 1371 aaKnown RBP10.48□□□□□ -0.73
Trub1-201ENSMUST00000026072 Dcaf11Q91VU6 549 aa10.48□□□□□ -0.73
Trub1-201ENSMUST00000026072 Cttnbp2B9EJA2 1648 aa10.48□□□□□ -0.73
Trub1-201ENSMUST00000026072 PnnO35691 725 aaKnown RBP10.47□□□□□ -0.73
Trub1-201ENSMUST00000026072 Znf316Q6PGE4 1016 aa10.47□□□□□ -0.73
Trub1-201ENSMUST00000026072 Bcl11aQ9QYE3 773 aa10.47□□□□□ -0.73
Trub1-201ENSMUST00000026072 Gtf2e1Q9D0D5 440 aa10.47□□□□□ -0.73
Trub1-201ENSMUST00000026072 Chmp4bQ9D8B3 224 aaKnown RBP10.47□□□□□ -0.73
Trub1-201ENSMUST00000026072 Mak16Q8BGS0 296 aaKnown RBP10.46□□□□□ -0.73
Trub1-201ENSMUST00000026072 Irx3P81067 507 aa10.46□□□□□ -0.74
Trub1-201ENSMUST00000026072 Dnai1Q8C0M8 701 aa10.46□□□□□ -0.74
Trub1-201ENSMUST00000026072 LrpprcQ6PB66 1392 aaKnown RBP10.46□□□□□ -0.74
Trub1-201ENSMUST00000026072 KnstrnQ9D9Z1 312 aaKnown RBP10.46□□□□□ -0.74
Trub1-201ENSMUST00000026072 CntlnA2AM05 1397 aa10.46□□□□□ -0.74
Trub1-201ENSMUST00000026072 Iqgap2Q3UQ44 1575 aa10.45□□□□□ -0.74
Trub1-201ENSMUST00000026072 Fyco1Q8VDC1 1437 aa10.45□□□□□ -0.74
Trub1-201ENSMUST00000026072 CrbnQ8C7D2 445 aa10.45□□□□□ -0.74
Trub1-201ENSMUST00000026072 Carmil1Q6EDY6 1374 aa10.44□□□□□ -0.74
Trub1-201ENSMUST00000026072 Tnnt1O88346 262 aa10.44□□□□□ -0.74
Trub1-201ENSMUST00000026072 Sh3bp5Q9Z131 463 aa10.44□□□□□ -0.74
Trub1-201ENSMUST00000026072 Pibf1E9Q6K3 756 aa10.44□□□□□ -0.74
Trub1-201ENSMUST00000026072 Rassf8Q8CJ96 419 aa10.43□□□□□ -0.74
Trub1-201ENSMUST00000026072 Dnttip2Q8R2M2 758 aaKnown RBP10.43□□□□□ -0.74
Trub1-201ENSMUST00000026072 Golga2Q921M4 999 aa10.43□□□□□ -0.74
Trub1-201ENSMUST00000026072 Fhad1A6PWD2 1420 aa10.43□□□□□ -0.74
Trub1-201ENSMUST00000026072 Tmf1B9EKI3 1091 aa10.43□□□□□ -0.74
Trub1-201ENSMUST00000026072 GorabQ8BRM2 368 aa10.43□□□□□ -0.74
Trub1-201ENSMUST00000026072 Erich6bQ9D4S6 220 aa10.43□□□□□ -0.74
Trub1-201ENSMUST00000026072 Rtf1A2AQ19 715 aaKnown RBP10.42□□□□□ -0.74
Trub1-201ENSMUST00000026072 Ppp1r18Q8BQ30 594 aa10.42□□□□□ -0.74
Trub1-201ENSMUST00000026072 Sox12Q04890 314 aa10.42□□□□□ -0.74
Trub1-201ENSMUST00000026072 EspnQ9ET47 871 aa10.42□□□□□ -0.74
Trub1-201ENSMUST00000026072 Srcin1Q9QWI6 1250 aa10.42□□□□□ -0.74
Trub1-201ENSMUST00000026072 Dhx29Q6PGC1 1365 aaKnown RBP10.42□□□□□ -0.74
Trub1-201ENSMUST00000026072 AknaQ80VW7 1404 aa10.42□□□□□ -0.74
Trub1-201ENSMUST00000026072 Mbd3Q9Z2D8 285 aaKnown RBP10.41□□□□□ -0.74
Trub1-201ENSMUST00000026072 Pcmtd1P59913 357 aa10.41□□□□□ -0.74
Trub1-201ENSMUST00000026072 Ccnb3Q810T2 1396 aa10.41□□□□□ -0.74
Trub1-201ENSMUST00000026072 Slc4a1apE9PX68 744 aa10.41□□□□□ -0.74
Trub1-201ENSMUST00000026072 Mfap1aC0HKD8 439 aaKnown RBP10.4□□□□□ -0.74
Trub1-201ENSMUST00000026072 Mfap1bC0HKD9 439 aaKnown RBP10.4□□□□□ -0.74
Trub1-201ENSMUST00000026072 Q3TQI7 289 aaKnown RBP10.4□□□□□ -0.74
Trub1-201ENSMUST00000026072 Ksr2Q3UVC0 959 aa10.4□□□□□ -0.74
Trub1-201ENSMUST00000026072 Lemd3Q9WU40 921 aa10.4□□□□□ -0.74
Trub1-201ENSMUST00000026072 Arhgap35Q91YM2 1499 aa10.4□□□□□ -0.75
Trub1-201ENSMUST00000026072 Kif3bQ61771 747 aa10.39□□□□□ -0.75
Trub1-201ENSMUST00000026072 ChgaP26339 463 aaKnown RBP10.39□□□□□ -0.75
Trub1-201ENSMUST00000026072 HnrnpuQ8VEK3 800 aaKnown RBP10.39□□□□□ -0.75
Trub1-201ENSMUST00000026072 Anapc15P60007 132 aa10.39□□□□□ -0.75
Trub1-201ENSMUST00000026072 Cc2d2aQ8CFW7 1633 aa10.39□□□□□ -0.75
Trub1-201ENSMUST00000026072 Zfp777B9EKF4 885 aa10.38□□□□□ -0.75
Trub1-201ENSMUST00000026072 MccE9PWI3 1003 aa10.38□□□□□ -0.75
Trub1-201ENSMUST00000026072 AU015836B2RUM3 263 aa10.37□□□□□ -0.75
Trub1-201ENSMUST00000026072 Nolc1E9Q5C9 702 aaKnown RBP10.37□□□□□ -0.75
Trub1-201ENSMUST00000026072 CgnP59242 1191 aa10.37□□□□□ -0.75
Trub1-201ENSMUST00000026072 Fan1Q69ZT1 1020 aa10.37□□□□□ -0.75
Trub1-201ENSMUST00000026072 Sart3Q9JLI8 962 aaKnown RBP10.36□□□□□ -0.75
Trub1-201ENSMUST00000026072 Txndc2Q6P902 515 aa10.36□□□□□ -0.75
Trub1-201ENSMUST00000026072 PtprkP35822 1457 aa10.36□□□□□ -0.75
Trub1-201ENSMUST00000026072 Iffo2Q8R2V2 512 aa10.35□□□□□ -0.75
Trub1-201ENSMUST00000026072 BicraF8VPZ9 1578 aa10.35□□□□□ -0.75
Trub1-201ENSMUST00000026072 Ipo8Q7TMY7 1010 aa10.34□□□□□ -0.75
Trub1-201ENSMUST00000026072 CrebrfQ8CDG5 640 aaKnown RBP10.34□□□□□ -0.75
Trub1-201ENSMUST00000026072 Rock2P70336 1388 aa10.34□□□□□ -0.75
Trub1-201ENSMUST00000026072 MecomP14404 1042 aa10.34□□□□□ -0.75
Trub1-201ENSMUST00000026072 Q8BT18 775 aa10.33□□□□□ -0.76
Trub1-201ENSMUST00000026072 Ipo9Q91YE6 1041 aa10.33□□□□□ -0.76
Trub1-201ENSMUST00000026072 Dnajc5bQ9CQ94 199 aa10.33□□□□□ -0.76
Trub1-201ENSMUST00000026072 Sart1Q9Z315 806 aaKnown RBP10.33□□□□□ -0.76
Trub1-201ENSMUST00000026072 Top2aQ01320 1528 aaKnown RBP10.33□□□□□ -0.76
Trub1-201ENSMUST00000026072 Psme1P97371 249 aa10.32□□□□□ -0.76
Trub1-201ENSMUST00000026072 WrnO09053 1401 aa10.32□□□□□ -0.76
Trub1-201ENSMUST00000026072 Brpf1B2RRD7 1212 aa10.32□□□□□ -0.76
Trub1-201ENSMUST00000026072 Rad54l2Q99NG0 1466 aa10.32□□□□□ -0.76
Trub1-201ENSMUST00000026072 Pank3Q8R2W9 370 aa10.32□□□□□ -0.76
Trub1-201ENSMUST00000026072 Utp14aQ640M1 767 aaKnown RBP10.31□□□□□ -0.76
Trub1-201ENSMUST00000026072 Ggt6Q6PDE7 497 aa10.31□□□□□ -0.76
Trub1-201ENSMUST00000026072 Nup155Q99P88 1391 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms