RNA–Protein interactions for RNA: ENSMUST00000008297.4

Clstn3-201, Transcript of Calsyntenin-3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Clstn3, Length 4,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clstn3-201ENSMUST00000008297 Cux1P53564 1515 aa12.5□□□□□ -0.41
Clstn3-201ENSMUST00000008297 Mroh3A0A1D5RM54 893 aa12.5□□□□□ -0.41
Clstn3-201ENSMUST00000008297 Ankrd26Q811D2 1581 aa12.49□□□□□ -0.41
Clstn3-201ENSMUST00000008297 Slc4a2P13808 1237 aaKnown RBP12.49□□□□□ -0.41
Clstn3-201ENSMUST00000008297 Polr1aO35134 1717 aaKnown RBP12.49□□□□□ -0.41
Clstn3-201ENSMUST00000008297 TnnQ80Z71 1560 aa12.49□□□□□ -0.41
Clstn3-201ENSMUST00000008297 Upf2A2AT37 1269 aaKnown RBP12.48□□□□□ -0.41
Clstn3-201ENSMUST00000008297 Atp1b4Q99ME6 356 aa12.47□□□□□ -0.41
Clstn3-201ENSMUST00000008297 Naip2Q9QUK4 1447 aa12.46□□□□□ -0.41
Clstn3-201ENSMUST00000008297 Gm7298A0A0N4SVU1 1476 aa12.46□□□□□ -0.42
Clstn3-201ENSMUST00000008297 Kdm5bQ80Y84 1544 aa12.46□□□□□ -0.42
Clstn3-201ENSMUST00000008297 Ccdc27Q3V036 639 aa12.45□□□□□ -0.42
Clstn3-201ENSMUST00000008297 AknaQ80VW7 1404 aa12.45□□□□□ -0.42
Clstn3-201ENSMUST00000008297 Nup155Q99P88 1391 aaKnown RBP12.44□□□□□ -0.42
Clstn3-201ENSMUST00000008297 Pak3Q61036 559 aa12.44□□□□□ -0.42
Clstn3-201ENSMUST00000008297 Tcerg1Q8CGF7 1100 aaKnown RBP12.44□□□□□ -0.42
Clstn3-201ENSMUST00000008297 Polr3glQ8R0C0 218 aa12.44□□□□□ -0.42
Clstn3-201ENSMUST00000008297 EprsQ8CGC7 1512 aaKnown RBP12.43□□□□□ -0.42
Clstn3-201ENSMUST00000008297 CadpsQ80TJ1 1355 aa12.43□□□□□ -0.42
Clstn3-201ENSMUST00000008297 Washc2Q6PGL7 1334 aa12.43□□□□□ -0.42
Clstn3-201ENSMUST00000008297 A2mQ6GQT1 1474 aa12.42□□□□□ -0.42
Clstn3-201ENSMUST00000008297 Dhx57Q6P5D3 1388 aaKnown RBP12.42□□□□□ -0.42
Clstn3-201ENSMUST00000008297 ArxO35085 564 aa12.41□□□□□ -0.42
Clstn3-201ENSMUST00000008297 Ifit1bl1D3Z6F0 470 aa12.41□□□□□ -0.42
Clstn3-201ENSMUST00000008297 Tdrd9Q14BI7 1383 aa12.4□□□□□ -0.42
Clstn3-201ENSMUST00000008297 Naip5Q9R016 1403 aa12.4□□□□□ -0.42
Clstn3-201ENSMUST00000008297 Cc2d2bA0A286YDU8 1405 aa12.4□□□□□ -0.42
Clstn3-201ENSMUST00000008297 Hsp90aa1P07901 733 aaKnown RBP12.4□□□□□ -0.43
Clstn3-201ENSMUST00000008297 SynmQ70IV5 1561 aa12.39□□□□□ -0.43
Clstn3-201ENSMUST00000008297 Urb2E9Q7L1 1524 aaKnown RBP12.38□□□□□ -0.43
Clstn3-201ENSMUST00000008297 Gm20521D3Z5F7 333 aa12.38□□□□□ -0.43
Clstn3-201ENSMUST00000008297 Apbb1Q9QXJ1 710 aa12.38□□□□□ -0.43
Clstn3-201ENSMUST00000008297 Ift140E9PY46 1464 aa12.38□□□□□ -0.43
Clstn3-201ENSMUST00000008297 CanxP35564 591 aaKnown RBP12.38□□□□□ -0.43
Clstn3-201ENSMUST00000008297 B4galnt3Q6L8S8 986 aa12.37□□□□□ -0.43
Clstn3-201ENSMUST00000008297 PnisrA2AJT4 805 aaKnown RBP12.37□□□□□ -0.43
Clstn3-201ENSMUST00000008297 Sart1Q9Z315 806 aaKnown RBP12.37□□□□□ -0.43
Clstn3-201ENSMUST00000008297 Dapk1Q80YE7 1442 aa12.36□□□□□ -0.43
Clstn3-201ENSMUST00000008297 Stk24Q99KH8 431 aa12.36□□□□□ -0.43
Clstn3-201ENSMUST00000008297 Zscan21Q07231 555 aa12.36□□□□□ -0.43
Clstn3-201ENSMUST00000008297 Dbr1Q923B1 550 aa12.35□□□□□ -0.43
Clstn3-201ENSMUST00000008297 Ipo9Q91YE6 1041 aa12.35□□□□□ -0.43
Clstn3-201ENSMUST00000008297 Plb1Q3TTY0 1478 aa12.35□□□□□ -0.43
Clstn3-201ENSMUST00000008297 Kcnh8P59111 1102 aa12.34□□□□□ -0.43
Clstn3-201ENSMUST00000008297 Srpk2O54781 681 aaKnown RBP12.34□□□□□ -0.43
Clstn3-201ENSMUST00000008297 Ncoa2Q61026 1462 aa12.34□□□□□ -0.43
Clstn3-201ENSMUST00000008297 Gm1043A0A140LJC2 1431 aa12.34□□□□□ -0.43
Clstn3-201ENSMUST00000008297 Mrc2Q64449 1479 aa12.33□□□□□ -0.44
Clstn3-201ENSMUST00000008297 Jph4Q80WT0 628 aa12.33□□□□□ -0.44
Clstn3-201ENSMUST00000008297 Mak16Q8BGS0 296 aaKnown RBP12.33□□□□□ -0.44
Clstn3-201ENSMUST00000008297 Rangap1P46061 589 aaKnown RBP12.32□□□□□ -0.44
Clstn3-201ENSMUST00000008297 Neurod2Q62414 383 aa12.32□□□□□ -0.44
Clstn3-201ENSMUST00000008297 Arhgap31A6X8Z5 1425 aa12.32□□□□□ -0.44
Clstn3-201ENSMUST00000008297 Erich3F6QRE9 1637 aa12.31□□□□□ -0.44
Clstn3-201ENSMUST00000008297 ChgaP26339 463 aaKnown RBP12.31□□□□□ -0.44
Clstn3-201ENSMUST00000008297 Crocc2F6XLV1 1638 aa12.31□□□□□ -0.44
Clstn3-201ENSMUST00000008297 Arid3cA6PWV5 409 aa12.31□□□□□ -0.44
Clstn3-201ENSMUST00000008297 NexmifQ5DTT1 1515 aa12.3□□□□□ -0.44
Clstn3-201ENSMUST00000008297 PrkcshO08795 521 aa12.3□□□□□ -0.44
Clstn3-201ENSMUST00000008297 Ttll5Q8CHB8 1328 aa12.3□□□□□ -0.44
Clstn3-201ENSMUST00000008297 Dhx9O70133 1380 aaKnown RBP12.3□□□□□ -0.44
Clstn3-201ENSMUST00000008297 Rpgrip1lQ8CG73 1264 aa12.28□□□□□ -0.44
Clstn3-201ENSMUST00000008297 Ncoa1P70365 1447 aa12.28□□□□□ -0.44
Clstn3-201ENSMUST00000008297 Trim30dE9PWL0 497 aa12.28□□□□□ -0.44
Clstn3-201ENSMUST00000008297 Abcc5Q9R1X5 1436 aa12.28□□□□□ -0.44
Clstn3-201ENSMUST00000008297 Cnga1P29974 684 aa12.27□□□□□ -0.44
Clstn3-201ENSMUST00000008297 Trim26Q99PN3 545 aa12.27□□□□□ -0.44
Clstn3-201ENSMUST00000008297 Rock2P70336 1388 aa12.27□□□□□ -0.44
Clstn3-201ENSMUST00000008297 Grin2aP35436 1464 aa12.27□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Tmf1B9EKI3 1091 aa12.27□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Ccdc9Q8VC31 543 aaKnown RBP12.27□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Gpatch8A2A6A1 1505 aa12.27□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Mug1P28665 1476 aa12.27□□□□□ -0.45
Clstn3-201ENSMUST00000008297 L3mbtl2P59178 703 aa12.27□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Srcin1Q9QWI6 1250 aa12.27□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Pank3Q8R2W9 370 aa12.26□□□□□ -0.45
Clstn3-201ENSMUST00000008297 CrbnQ8C7D2 445 aa12.25□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Camsap2Q8C1B1 1461 aa12.25□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Slc4a1apE9PX68 744 aa12.24□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Kif3bQ61771 747 aa12.24□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Inpp5dQ9ES52 1191 aa12.24□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Samd9lQ69Z37 1561 aa12.24□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Liat1Q810M6 228 aa12.24□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Q7TT23 1179 aa12.23□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Fam163aQ8CAA5 168 aa12.23□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Il16O54824 1322 aa12.23□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Plekhg5Q66T02 1073 aa12.23□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Chmp5Q9D7S9 219 aa12.23□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Spag9Q58A65 1321 aaKnown RBP12.23□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Lmo7E9PYF4 1699 aaKnown RBP12.23□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Rwdd1Q9CQK7 243 aa12.22□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Gtf2e1Q9D0D5 440 aa12.22□□□□□ -0.45
Clstn3-201ENSMUST00000008297 IqubQ8CDK3 788 aa12.22□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Dnajc5bQ9CQ94 199 aa12.22□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Rprd2Q6NXI6 1469 aaKnown RBP12.22□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Stag3O70576 1240 aa12.21□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Lemd3Q9WU40 921 aa12.21□□□□□ -0.45
Clstn3-201ENSMUST00000008297 Hsp90ab1P11499 724 aaKnown RBP12.21□□□□□ -0.46
Clstn3-201ENSMUST00000008297 Esx1O88933 382 aa12.21□□□□□ -0.46
Clstn3-201ENSMUST00000008297 Zfp444Q3TDV8 331 aaKnown RBP12.21□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 43.9 ms