RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 1700019A02RikA0A087WPV9 146 aa18.04■□□□□ 0.48
Col1a1-201ENSMUST00000001547 Lemd3Q9WU40 921 aa18.04■□□□□ 0.48
Col1a1-201ENSMUST00000001547 Dhx57Q6P5D3 1388 aaKnown RBP18.04■□□□□ 0.48
Col1a1-201ENSMUST00000001547 Exoc6Q8R313 802 aa18.04■□□□□ 0.48
Col1a1-201ENSMUST00000001547 Tmf1B9EKI3 1091 aa18.03■□□□□ 0.48
Col1a1-201ENSMUST00000001547 Smarca4Q3TKT4 1613 aaKnown RBP18.02■□□□□ 0.48
Col1a1-201ENSMUST00000001547 Rwdd1Q9CQK7 243 aa18.02■□□□□ 0.48
Col1a1-201ENSMUST00000001547 Map7O88735 730 aa18.02■□□□□ 0.48
Col1a1-201ENSMUST00000001547 Htatsf1Q8BGC0 757 aa18.02■□□□□ 0.48
Col1a1-201ENSMUST00000001547 Ppm1gQ61074 542 aa18.01■□□□□ 0.47
Col1a1-201ENSMUST00000001547 SafbD3YXK2 937 aaKnown RBP18.01■□□□□ 0.47
Col1a1-201ENSMUST00000001547 B4galnt3Q6L8S8 986 aa18■□□□□ 0.47
Col1a1-201ENSMUST00000001547 Stk26Q99JT2 416 aa18■□□□□ 0.47
Col1a1-201ENSMUST00000001547 Mbd3Q9Z2D8 285 aaKnown RBP18■□□□□ 0.47
Col1a1-201ENSMUST00000001547 ScribQ80U72 1612 aa18■□□□□ 0.47
Col1a1-201ENSMUST00000001547 Nup155Q99P88 1391 aaKnown RBP18■□□□□ 0.47
Col1a1-201ENSMUST00000001547 Plekhh2Q8C115 1491 aa17.99■□□□□ 0.47
Col1a1-201ENSMUST00000001547 Ccdc27Q3V036 639 aa17.99■□□□□ 0.47
Col1a1-201ENSMUST00000001547 Speer4f1Q9D5Q6 258 aa17.97■□□□□ 0.47
Col1a1-201ENSMUST00000001547 Ccnb3Q810T2 1396 aa17.95■□□□□ 0.46
Col1a1-201ENSMUST00000001547 Cttnbp2B9EJA2 1648 aa17.95■□□□□ 0.46
Col1a1-201ENSMUST00000001547 PnnO35691 725 aaKnown RBP17.94■□□□□ 0.46
Col1a1-201ENSMUST00000001547 Zscan21Q07231 555 aa17.94■□□□□ 0.46
Col1a1-201ENSMUST00000001547 Rock2P70336 1388 aa17.93■□□□□ 0.46
Col1a1-201ENSMUST00000001547 Slc4a3P16283 1227 aa17.93■□□□□ 0.46
Col1a1-201ENSMUST00000001547 Rtn4Q99P72 1162 aaKnown RBP17.93■□□□□ 0.46
Col1a1-201ENSMUST00000001547 LrpprcQ6PB66 1392 aaKnown RBP17.92■□□□□ 0.46
Col1a1-201ENSMUST00000001547 Kif3bQ61771 747 aa17.91■□□□□ 0.46
Col1a1-201ENSMUST00000001547 Znf316Q6PGE4 1016 aa17.91■□□□□ 0.46
Col1a1-201ENSMUST00000001547 Spryd3E9Q9B3 442 aa17.9■□□□□ 0.46
Col1a1-201ENSMUST00000001547 Mak16Q8BGS0 296 aaKnown RBP17.9■□□□□ 0.46
Col1a1-201ENSMUST00000001547 Dcaf11Q91VU6 549 aa17.9■□□□□ 0.46
Col1a1-201ENSMUST00000001547 Casc1Q6TDU8 730 aa17.88■□□□□ 0.45
Col1a1-201ENSMUST00000001547 KnstrnQ9D9Z1 312 aaKnown RBP17.88■□□□□ 0.45
Col1a1-201ENSMUST00000001547 Adam1bQ8R534 806 aa17.88■□□□□ 0.45
Col1a1-201ENSMUST00000001547 U2af1Q9D883 239 aaKnown RBP17.88■□□□□ 0.45
Col1a1-201ENSMUST00000001547 Rtf1A2AQ19 715 aaKnown RBP17.87■□□□□ 0.45
Col1a1-201ENSMUST00000001547 Srcin1Q9QWI6 1250 aa17.87■□□□□ 0.45
Col1a1-201ENSMUST00000001547 UacaQ8CGB3 1411 aa17.86■□□□□ 0.45
Col1a1-201ENSMUST00000001547 Hsp90b1P08113 802 aaKnown RBP17.86■□□□□ 0.45
Col1a1-201ENSMUST00000001547 Psme1P97371 249 aa17.86■□□□□ 0.45
Col1a1-201ENSMUST00000001547 U2surpQ6NV83 1029 aaKnown RBP17.86■□□□□ 0.45
Col1a1-201ENSMUST00000001547 Tcerg1Q8CGF7 1100 aaKnown RBP17.86■□□□□ 0.45
Col1a1-201ENSMUST00000001547 Supt16hQ920B9 1047 aa17.86■□□□□ 0.45
Col1a1-201ENSMUST00000001547 Golga2Q921M4 999 aa17.85■□□□□ 0.45
Col1a1-201ENSMUST00000001547 Plin1Q8CGN5 517 aa17.85■□□□□ 0.45
Col1a1-201ENSMUST00000001547 Sart1Q9Z315 806 aaKnown RBP17.85■□□□□ 0.45
Col1a1-201ENSMUST00000001547 HnrnpuQ8VEK3 800 aaKnown RBP17.84■□□□□ 0.45
Col1a1-201ENSMUST00000001547 Clstn1Q9EPL2 979 aa17.84■□□□□ 0.45
Col1a1-201ENSMUST00000001547 Dhx29Q6PGC1 1365 aaKnown RBP17.83■□□□□ 0.44
Col1a1-201ENSMUST00000001547 Tnnt2P50752 301 aa17.83■□□□□ 0.44
Col1a1-201ENSMUST00000001547 Birc3O08863 600 aa17.82■□□□□ 0.44
Col1a1-201ENSMUST00000001547 Ecm2Q5FW85 670 aa17.82■□□□□ 0.44
Col1a1-201ENSMUST00000001547 Pes1Q9EQ61 584 aaKnown RBP17.82■□□□□ 0.44
Col1a1-201ENSMUST00000001547 Txndc2Q6P902 515 aa17.81■□□□□ 0.44
Col1a1-201ENSMUST00000001547 Chmp5Q9D7S9 219 aa17.81■□□□□ 0.44
Col1a1-201ENSMUST00000001547 Usp47Q8BY87 1376 aa17.79■□□□□ 0.44
Col1a1-201ENSMUST00000001547 Iqgap2Q3UQ44 1575 aa17.78■□□□□ 0.44
Col1a1-201ENSMUST00000001547 Irx3P81067 507 aa17.78■□□□□ 0.44
Col1a1-201ENSMUST00000001547 Slc4a1apE9PX68 744 aa17.78■□□□□ 0.44
Col1a1-201ENSMUST00000001547 Tmco5bQ80X59 307 aa17.77■□□□□ 0.44
Col1a1-201ENSMUST00000001547 WrnO09053 1401 aa17.77■□□□□ 0.44
Col1a1-201ENSMUST00000001547 MccE9PWI3 1003 aa17.77■□□□□ 0.43
Col1a1-201ENSMUST00000001547 EspnQ9ET47 871 aa17.76■□□□□ 0.43
Col1a1-201ENSMUST00000001547 Fan1Q69ZT1 1020 aa17.76■□□□□ 0.43
Col1a1-201ENSMUST00000001547 Bcl11aQ9QYE3 773 aa17.76■□□□□ 0.43
Col1a1-201ENSMUST00000001547 CrbnQ8C7D2 445 aa17.76■□□□□ 0.43
Col1a1-201ENSMUST00000001547 Stard8Q8K031 1019 aa17.76■□□□□ 0.43
Col1a1-201ENSMUST00000001547 Sox12Q04890 314 aa17.75■□□□□ 0.43
Col1a1-201ENSMUST00000001547 Erich6bQ9D4S6 220 aa17.74■□□□□ 0.43
Col1a1-201ENSMUST00000001547 Sart3Q9JLI8 962 aaKnown RBP17.73■□□□□ 0.43
Col1a1-201ENSMUST00000001547 Rsph4aQ8BYM7 716 aa17.73■□□□□ 0.43
Col1a1-201ENSMUST00000001547 CenpjQ569L8 1344 aa17.72■□□□□ 0.43
Col1a1-201ENSMUST00000001547 Q3TQI7 289 aaKnown RBP17.71■□□□□ 0.43
Col1a1-201ENSMUST00000001547 Sh3bp5Q9Z131 463 aa17.7■□□□□ 0.42
Col1a1-201ENSMUST00000001547 Znf330Q922H9 316 aa17.7■□□□□ 0.42
Col1a1-201ENSMUST00000001547 Cluap1Q8R3P7 413 aa17.7■□□□□ 0.42
Col1a1-201ENSMUST00000001547 Dnttip2Q8R2M2 758 aaKnown RBP17.69■□□□□ 0.42
Col1a1-201ENSMUST00000001547 Pank3Q8R2W9 370 aa17.69■□□□□ 0.42
Col1a1-201ENSMUST00000001547 AU015836B2RUM3 263 aa17.69■□□□□ 0.42
Col1a1-201ENSMUST00000001547 Tnnt1O88346 262 aa17.68■□□□□ 0.42
Col1a1-201ENSMUST00000001547 Cc2d2bA0A286YDU8 1405 aa17.68■□□□□ 0.42
Col1a1-201ENSMUST00000001547 Ksr2Q3UVC0 959 aa17.68■□□□□ 0.42
Col1a1-201ENSMUST00000001547 Dnai1Q8C0M8 701 aa17.68■□□□□ 0.42
Col1a1-201ENSMUST00000001547 Smg6P61406 1418 aaKnown RBP17.67■□□□□ 0.42
Col1a1-201ENSMUST00000001547 Spag9Q58A65 1321 aaKnown RBP17.67■□□□□ 0.42
Col1a1-201ENSMUST00000001547 Utp14aQ640M1 767 aaKnown RBP17.66■□□□□ 0.42
Col1a1-201ENSMUST00000001547 Ccar1Q8CH18 1146 aaKnown RBP17.66■□□□□ 0.42
Col1a1-201ENSMUST00000001547 Ncoa2Q61026 1462 aa17.65■□□□□ 0.42
Col1a1-201ENSMUST00000001547 Calcoco2A2A6M5 331 aa17.64■□□□□ 0.41
Col1a1-201ENSMUST00000001547 Senp3Q9EP97 568 aaKnown RBP17.64■□□□□ 0.41
Col1a1-201ENSMUST00000001547 Eif4g2Q62448 906 aaKnown RBP17.63■□□□□ 0.41
Col1a1-201ENSMUST00000001547 MsnP26041 577 aaKnown RBP17.63■□□□□ 0.41
Col1a1-201ENSMUST00000001547 Cux1P53564 1515 aa17.62■□□□□ 0.41
Col1a1-201ENSMUST00000001547 MlecQ6ZQI3 291 aaKnown RBP17.62■□□□□ 0.41
Col1a1-201ENSMUST00000001547 Rassf8Q8CJ96 419 aa17.62■□□□□ 0.41
Col1a1-201ENSMUST00000001547 Cc2d2aQ8CFW7 1633 aa17.62■□□□□ 0.41
Col1a1-201ENSMUST00000001547 Ipo8Q7TMY7 1010 aa17.62■□□□□ 0.41
Col1a1-201ENSMUST00000001547 Jph4Q80WT0 628 aa17.62■□□□□ 0.41
Col1a1-201ENSMUST00000001547 Tdrd9Q14BI7 1383 aa17.62■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 49.1 ms