RNA–Protein interactions for RNA: snR11

snR11, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR11, Length 258 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR11snR11 NCE102Q12207 173 aaRIP-Chip data3.64□□□□□ -1.83not detected
snR11snR11 PDH1Q12428 516 aaKnown RBP3.64□□□□□ -1.83
snR11snR11 SMC6Q12749 1114 aa3.64□□□□□ -1.83
snR11snR11 YBR298C-AQ8TGK4 73 aa3.64□□□□□ -1.83
snR11snR11 PDX1P16451 410 aa3.63□□□□□ -1.83
snR11snR11 CDC60P26637 1090 aaKnown RBP3.63□□□□□ -1.83
snR11snR11 YBR144CP34215 104 aa3.63□□□□□ -1.83
snR11snR11 PXA2P34230 853 aa3.63□□□□□ -1.83
snR11snR11 PEX5P35056 612 aa3.63□□□□□ -1.83
snR11snR11 RPL32P38061 130 aaKnown RBP3.63□□□□□ -1.83
snR11snR11 RRP3P38712 501 aaKnown RBP3.63□□□□□ -1.83
snR11snR11 PES4P39684 611 aa3.63□□□□□ -1.83
snR11snR11 YML6P51998 286 aa3.63□□□□□ -1.83
snR11snR11 LCL3P53153 274 aa3.63□□□□□ -1.83
snR11snR11 SAM50P53969 484 aa3.63□□□□□ -1.83
snR11snR11 FMP40Q08968 688 aaPredicted RBP3.63□□□□□ -1.83
snR11snR11 NMD4Q12129 218 aa3.63□□□□□ -1.83
snR11snR11 TIP41Q12199 356 aa3.63□□□□□ -1.83
snR11snR11 YOL159C-AQ3E769 90 aa3.63□□□□□ -1.83
snR11snR11 SGS1P35187 1447 aa3.62□□□□□ -1.83
snR11snR11 HSP82P02829 709 aaKnown RBP3.62□□□□□ -1.83
snR11snR11 VPH1P32563 840 aaKnown RBP3.62□□□□□ -1.83
snR11snR11 VPS17P32913 551 aa3.62□□□□□ -1.83
snR11snR11 TIF3P34167 436 aaKnown RBP3.62□□□□□ -1.83
snR11snR11 YKL023WP36103 277 aaKnown RBP3.62□□□□□ -1.83
snR11snR11 ICS2P38284 255 aa3.62□□□□□ -1.83
snR11snR11 SRP72P38688 640 aaKnown RBP3.62□□□□□ -1.83
snR11snR11 PTR3P43606 678 aa3.62□□□□□ -1.83
snR11snR11 SNG1P46950 547 aa3.62□□□□□ -1.83
snR11snR11 BUD32P53323 261 aa3.62□□□□□ -1.83
snR11snR11 DUG3P53871 357 aa3.62□□□□□ -1.83
snR11snR11 RCF1Q03713 159 aa3.62□□□□□ -1.83
snR11snR11 YDR286CQ05530 114 aa3.62□□□□□ -1.83
snR11snR11 CDC45Q08032 650 aa3.62□□□□□ -1.83
snR11snR11 YOR365CQ08844 703 aa3.62□□□□□ -1.83
snR11snR11 GCN4P03069 281 aa3.61□□□□□ -1.83
snR11snR11 MRP13P12686 339 aa3.61□□□□□ -1.83
snR11snR11 SRO77P38163 1010 aa3.61□□□□□ -1.83
snR11snR11 YHR210CP38893 341 aa3.61□□□□□ -1.83
snR11snR11 CIN4P39110 191 aa3.61□□□□□ -1.83
snR11snR11 YEL057CP39983 233 aa3.61□□□□□ -1.83
snR11snR11 IKS1P47042 667 aa3.61□□□□□ -1.83
snR11snR11 YJR154WP47181 346 aa3.61□□□□□ -1.83
snR11snR11 ALT2P52892 507 aa3.61□□□□□ -1.83
snR11snR11 YGR126WP53274 230 aa3.61□□□□□ -1.83
snR11snR11 RPT6Q01939 405 aaKnown RBP3.61□□□□□ -1.83
snR11snR11 HUA2Q12134 243 aa3.61□□□□□ -1.83
snR11snR11 RTN2Q12443 393 aa3.61□□□□□ -1.83
snR11snR11 YPT6Q99260 215 aa3.61□□□□□ -1.83
snR11snR11 RPL15AP05748 204 aaKnown RBP3.6□□□□□ -1.83
snR11snR11 PEP4P07267 405 aaKnown RBP3.6□□□□□ -1.83
snR11snR11 PEP5P12868 1029 aa3.6□□□□□ -1.83
snR11snR11 AMD1P15274 810 aaKnown RBP3.6□□□□□ -1.83
snR11snR11 TPM1P17536 199 aaKnown RBP3.6□□□□□ -1.83
snR11snR11 SEC62P21825 274 aa3.6□□□□□ -1.83
snR11snR11 CAJ1P39101 391 aa3.6□□□□□ -1.83
snR11snR11 CSM2P40465 213 aa3.6□□□□□ -1.83
snR11snR11 SHR3Q02774 210 aa3.6□□□□□ -1.83
snR11snR11 YEH1Q07804 573 aa3.6□□□□□ -1.83
snR11snR11 CTI6Q08923 506 aa3.6□□□□□ -1.83
snR11snR11 SEC53P07283 254 aaKnown RBP3.59□□□□□ -1.83
snR11snR11 PRP16P15938 1071 aaPredicted RBP3.59□□□□□ -1.83
snR11snR11 SUI2P20459 304 aaKnown RBP3.59□□□□□ -1.83
snR11snR11 ELO2P25358 347 aa3.59□□□□□ -1.83
snR11snR11 DBF4P32325 704 aa3.59□□□□□ -1.83
snR11snR11 ANP1P32629 500 aa3.59□□□□□ -1.83
snR11snR11 SIP2P34164 415 aaKnown RBP3.59□□□□□ -1.83
snR11snR11 UBP11P36026 717 aa3.59□□□□□ -1.83
snR11snR11 VPS52P39904 641 aa3.59□□□□□ -1.83
snR11snR11 ARF3P40994 183 aaRIP-Chip data3.59□□□□□ -1.83not detected
snR11snR11 YGL082WP53155 381 aa3.59□□□□□ -1.83
snR11snR11 RPC11Q04307 110 aaPredicted RBP3.59□□□□□ -1.83
snR11snR11 COQ9Q05779 260 aa3.59□□□□□ -1.83
snR11snR11 BNA5Q05979 453 aa3.59□□□□□ -1.83
snR11snR11 GRX6Q12438 231 aa3.59□□□□□ -1.83
snR11snR11 CYB2P00175 591 aa3.58□□□□□ -1.84
snR11snR11 RAD52P06778 471 aaKnown RBP3.58□□□□□ -1.84
snR11snR11 APE1P14904 514 aa3.58□□□□□ -1.84
snR11snR11 ART10P18634 518 aaKnown RBP3.58□□□□□ -1.84
snR11snR11 ADK2P26364 225 aa3.58□□□□□ -1.84
snR11snR11 PEP3P27801 918 aa3.58□□□□□ -1.84
snR11snR11 ATS1P31386 333 aa3.58□□□□□ -1.84
snR11snR11 MDM31P38880 579 aa3.58□□□□□ -1.84
snR11snR11 KRE9P39005 276 aa3.58□□□□□ -1.84
snR11snR11 AFG3P39925 761 aa3.58□□□□□ -1.84
snR11snR11 SGN1P40561 250 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
snR11snR11 RTT101P47050 842 aa3.58□□□□□ -1.84
snR11snR11 YDL186WP48568 277 aa3.58□□□□□ -1.84
snR11snR11 IMP4P53941 290 aaKnown RBP3.58□□□□□ -1.84
snR11snR11 ERP1Q05359 219 aaKnown RBP3.58□□□□□ -1.84
snR11snR11 GLO2Q05584 274 aa3.58□□□□□ -1.84
snR11snR11 PGC1Q08959 321 aa3.58□□□□□ -1.84
snR11snR11 PPT2Q12036 173 aa3.58□□□□□ -1.84
snR11snR11 SUC2P00724 532 aa3.57□□□□□ -1.84
snR11snR11 CBS1P14066 229 aa3.57□□□□□ -1.84
snR11snR11 MNE1P24720 663 aa3.57□□□□□ -1.84
snR11snR11 YCR007CP25354 239 aa3.57□□□□□ -1.84
snR11snR11 PRO3P32263 286 aaKnown RBP3.57□□□□□ -1.84
snR11snR11 NDC1P32500 655 aa3.57□□□□□ -1.84
snR11snR11 SEF1P34228 1148 aa3.57□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms