RNA–Protein interactions for RNA: snR11

snR11, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR11, Length 258 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR11snR11 MTC1P47018 478 aaKnown RBP13.56□□□□□ -0.24
snR11snR11 DRS1P32892 752 aaKnown RBP13.28□□□□□ -0.28
snR11snR11 DIP2Q12220 943 aaPredicted RBP11.4□□□□□ -0.58
snR11snR11 BFR2Q06631 534 aaKnown RBP11.36□□□□□ -0.59
snR11snR11 FAP1P53971 965 aa11.35□□□□□ -0.59
snR11snR11 AVT3P36062 692 aa11.23□□□□□ -0.61
snR11snR11 PRI1P10363 409 aa11.05□□□□□ -0.64
snR11snR11 ISW2Q08773 1120 aa11.05□□□□□ -0.64
snR11snR11 RPG1P38249 964 aaKnown RBP10.91□□□□□ -0.66
snR11snR11 AAD16Q02895 342 aa10.87□□□□□ -0.67
snR11snR11 RSE1Q04693 1361 aaKnown RBP10.85□□□□□ -0.67
snR11snR11 PRY3P47033 881 aa10.66□□□□□ -0.7
snR11snR11 TFA1P36100 482 aa10.54□□□□□ -0.72
snR11snR11 RPL17AP05740 184 aaKnown RBP10.46□□□□□ -0.73
snR11snR11 RPL17BP46990 184 aaKnown RBP10.46□□□□□ -0.73
snR11snR11 TSR3Q12094 313 aaKnown RBP10.45□□□□□ -0.74
snR11snR11 REB1P21538 810 aa10.32□□□□□ -0.76
snR11snR11 YCK3P39962 524 aa10.2□□□□□ -0.78
snR11snR11 SPT21P35209 758 aa10.13□□□□□ -0.79
snR11snR11 HAA1Q12753 694 aaKnown RBP10.07□□□□□ -0.8
snR11snR11 MRPL32P25348 183 aa10.02□□□□□ -0.81
snR11snR11 RIM101P33400 625 aa9.89□□□□□ -0.83
snR11snR11 YKR023WP36119 530 aaKnown RBP9.83□□□□□ -0.84
snR11snR11 CDC27P38042 758 aa9.69□□□□□ -0.86
snR11snR11 TFC8Q12308 588 aa9.63□□□□□ -0.87
snR11snR11 HOP09932 586 aa9.59□□□□□ -0.87
snR11snR11 OXP1P28273 1286 aa9.58□□□□□ -0.88
snR11snR11 DCD1P06773 312 aa9.52□□□□□ -0.89
snR11snR11 YGL015CP33199 130 aa9.42□□□□□ -0.9
snR11snR11 YIL055CP40523 627 aaKnown RBP9.36□□□□□ -0.91
snR11snR11 UBP10P53874 792 aaPredicted RBP9.35□□□□□ -0.91
snR11snR11 PTP3P40048 928 aa9.34□□□□□ -0.91
snR11snR11 YAH1Q12184 172 aaKnown RBP9.33□□□□□ -0.92
snR11snR11 BCH2P36122 765 aa9.32□□□□□ -0.92
snR11snR11 MAP2P38174 421 aaKnown RBP9.29□□□□□ -0.92
snR11snR11 SSP1P38871 571 aa9.29□□□□□ -0.92
snR11snR11 RSM7P47150 247 aa9.26□□□□□ -0.93
snR11snR11 YLR271WQ06152 274 aa9.25□□□□□ -0.93
snR11snR11 SCY1P53009 804 aa9.22□□□□□ -0.93
snR11snR11 ARP8Q12386 881 aaKnown RBP RIP-Chip data9.16□□□□□ -0.94not detected
snR11snR11 EPS1P40557 701 aa9.15□□□□□ -0.94
snR11snR11 AI2P03876 854 aa9.13□□□□□ -0.95
snR11snR11 BDF1P35817 686 aa9.08□□□□□ -0.96
snR11snR11 BBC1P47068 1157 aa9.07□□□□□ -0.96
snR11snR11 PSD2P53037 1138 aaKnown RBP9.07□□□□□ -0.96
snR11snR11 SLX5P32828 619 aaKnown RBP9.06□□□□□ -0.96
snR11snR11 MGA2P40578 1113 aa9□□□□□ -0.97
snR11snR11 CST9Q06032 482 aa8.95□□□□□ -0.98
snR11snR11 TIF4632P39936 914 aaKnown RBP8.9□□□□□ -0.98
snR11snR11 TGL3P40308 642 aa8.86□□□□□ -0.99
snR11snR11 MRM1P25270 412 aa8.83□□□□□ -1
snR11snR11 NSR1P27476 414 aaKnown RBP RIP-Chip data8.75□□□□□ -1.01not detected
snR11snR11 RCR1P38212 213 aa8.69□□□□□ -1.02
snR11snR11 RTG3P38165 486 aa8.68□□□□□ -1.02
snR11snR11 VPS29P38759 282 aa8.65□□□□□ -1.02
snR11snR11 YAP5P40574 245 aa8.63□□□□□ -1.03
snR11snR11 MST1P07236 462 aa8.62□□□□□ -1.03
snR11snR11 RAM2P29703 316 aa8.61□□□□□ -1.03
snR11snR11 YMR1P47147 688 aaKnown RBP RIP-Chip data8.58□□□□□ -1.04not detected
snR11snR11 YOR238WQ08634 303 aa8.58□□□□□ -1.04
snR11snR11 STS1P38637 319 aa8.55□□□□□ -1.04
snR11snR11 RQC2Q12532 1038 aaKnown RBP8.53□□□□□ -1.04
snR11snR11 DBP1P24784 617 aaKnown RBP8.52□□□□□ -1.05
snR11snR11 DMA1P38823 416 aa8.51□□□□□ -1.05
snR11snR11 MAK11P20484 414 aaKnown RBP8.5□□□□□ -1.05
snR11snR11 YFR006WP43590 535 aa8.49□□□□□ -1.05
snR11snR11 PIB1Q06651 286 aa8.49□□□□□ -1.05
snR11snR11 VMA1P17255 1071 aaKnown RBP8.41□□□□□ -1.06
snR11snR11 GTT3P39996 337 aa8.39□□□□□ -1.07
snR11snR11 BUD31P25337 157 aaPredicted RBP8.38□□□□□ -1.07
snR11snR11 COQ8P27697 501 aa8.36□□□□□ -1.07
snR11snR11 EDS1P38073 919 aa8.36□□□□□ -1.07
snR11snR11 UBP9P39967 754 aa8.36□□□□□ -1.07
snR11snR11 SAM3Q08986 587 aa8.35□□□□□ -1.07
snR11snR11 YBL029C-AQ3E756 94 aa8.33□□□□□ -1.08
snR11snR11 MIF2P35201 549 aa8.32□□□□□ -1.08
snR11snR11 SET1P38827 1080 aaKnown RBP8.32□□□□□ -1.08
snR11snR11 YOL036WQ08206 761 aa8.29□□□□□ -1.08
snR11snR11 NOP53Q12080 455 aaKnown RBP8.29□□□□□ -1.08
snR11snR11 PTC3P34221 468 aaKnown RBP8.28□□□□□ -1.08
snR11snR11 VNX1P42839 908 aa8.28□□□□□ -1.08
snR11snR11 WSC3Q12215 556 aa8.28□□□□□ -1.08
snR11snR11 MSB4Q12317 492 aa8.27□□□□□ -1.09
snR11snR11 SET4P42948 560 aa8.23□□□□□ -1.09
snR11snR11 YPR148CQ06523 435 aa8.23□□□□□ -1.09
snR11snR11 SAS10Q12136 610 aaPredicted RBP8.23□□□□□ -1.09
snR11snR11 GYP5Q12344 894 aa8.22□□□□□ -1.09
snR11snR11 GRE2Q12068 342 aaKnown RBP8.21□□□□□ -1.1
snR11snR11 ABP1P15891 592 aaKnown RBP8.2□□□□□ -1.1
snR11snR11 TIF11P38912 153 aaKnown RBP8.19□□□□□ -1.1
snR11snR11 IFH1P39520 1085 aa8.19□□□□□ -1.1
snR11snR11 SPP1Q03012 353 aa8.19□□□□□ -1.1
snR11snR11 GUT1P32190 709 aa8.17□□□□□ -1.1
snR11snR11 EAP1P36041 632 aaKnown RBP8.16□□□□□ -1.1
snR11snR11 ATH1P48016 1211 aa8.16□□□□□ -1.1
snR11snR11 ULI1P43604 169 aa8.13□□□□□ -1.11
snR11snR11 DCW1P36091 449 aa8.12□□□□□ -1.11
snR11snR11 IOC2Q12072 812 aa8.12□□□□□ -1.11
snR11snR11 TRP5P00931 707 aaKnown RBP8.11□□□□□ -1.11
snR11snR11 HTA1P04911 132 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms