Protein–RNA interactions for Protein: P38712

RRP3, ATP-dependent rRNA helicase RRP3, yeastyeast

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP3P38712 YML009W-BYML009W-B 477 nt20.2■□□□□ 0.82
RRP3P38712 NSR1YGR159C 1245 nt19.92■□□□□ 0.78
RRP3P38712 NOP1YDL014W 984 nt19.82■□□□□ 0.76
RRP3P38712 YKL036CYKL036C 393 nt18.52■□□□□ 0.56
RRP3P38712 Q0297Q0297 156 nt17.43■□□□□ 0.38
RRP3P38712 MDJ1YFL016C 1536 nt17.32■□□□□ 0.36
RRP3P38712 YJL027CYJL027C 417 nt17.31■□□□□ 0.36
RRP3P38712 SRX1YKL086W 384 nt17.31■□□□□ 0.36
RRP3P38712 SCS3YGL126W 1143 nt16.95■□□□□ 0.3
RRP3P38712 YCR051WYCR051W 669 nt16.4■□□□□ 0.22
RRP3P38712 YOL085CYOL085C 342 nt16.01■□□□□ 0.15
RRP3P38712 PKP1YIL042C 1185 nt15.67■□□□□ 0.1
RRP3P38712 RPP1BYDL130W 321 nt15.62■□□□□ 0.09
RRP3P38712 TRN1tP(UGG)A 72 nt15.47■□□□□ 0.07
RRP3P38712 SUF9tP(UGG)F 72 nt15.47■□□□□ 0.07
RRP3P38712 SUF8tP(UGG)H 72 nt15.47■□□□□ 0.07
RRP3P38712 tP(UGG)LtP(UGG)L 72 nt15.47■□□□□ 0.07
RRP3P38712 SUF7tP(UGG)M 72 nt15.47■□□□□ 0.07
RRP3P38712 tP(UGG)N1tP(UGG)N1 72 nt15.47■□□□□ 0.07
RRP3P38712 tP(UGG)N2tP(UGG)N2 72 nt15.47■□□□□ 0.07
RRP3P38712 tP(UGG)O1tP(UGG)O1 72 nt15.47■□□□□ 0.07
RRP3P38712 SUF11tP(UGG)O2 72 nt15.47■□□□□ 0.07
RRP3P38712 DBP2YNL112W 1641 nt15.46■□□□□ 0.07
RRP3P38712 SCJ1YMR214W 1134 nt15.46■□□□□ 0.07
RRP3P38712 CCC1YLR220W 969 nt15.26■□□□□ 0.03
RRP3P38712 ATS1YAL020C 1002 nt15.25■□□□□ 0.03
RRP3P38712 PET122YER153C 765 nt14.85□□□□□ -0.03
RRP3P38712 SCR1SCR1 522 nt14.83□□□□□ -0.04
RRP3P38712 YBR190WYBR190W 312 nt14.78□□□□□ -0.04
RRP3P38712 tP(UGG)O3tP(UGG)O3 72 nt14.71□□□□□ -0.05
RRP3P38712 RVS167YDR388W 1449 nt14.66□□□□□ -0.06
RRP3P38712 RRN5YLR141W 1092 nt14.46□□□□□ -0.09
RRP3P38712 RTC3YHR087W 336 nt14.42□□□□□ -0.1
RRP3P38712 YDJ1YNL064C 1230 nt14.27□□□□□ -0.13
RRP3P38712 RSB1YOR049C 1065 nt14.24□□□□□ -0.13
RRP3P38712 SHR5YOL110W 714 nt14.2□□□□□ -0.14
RRP3P38712 YER088W-BYER088W-B 147 nt14.18□□□□□ -0.14
RRP3P38712 PST2YDR032C 597 nt14.09□□□□□ -0.15
RRP3P38712 GAR1YHR089C 618 nt13.85□□□□□ -0.19
RRP3P38712 YKL097CYKL097C 411 nt13.67□□□□□ -0.22
RRP3P38712 DEP1YAL013W 1218 nt13.63□□□□□ -0.23
RRP3P38712 URN1YPR152C 1398 nt13.61□□□□□ -0.23
RRP3P38712 RPN10YHR200W 807 nt13.53□□□□□ -0.24
RRP3P38712 YNL208WYNL208W 600 nt13.52□□□□□ -0.25
RRP3P38712 SHU1YHL006C 453 nt13.42□□□□□ -0.26
RRP3P38712 TIR1YER011W 765 nt13.4□□□□□ -0.26
RRP3P38712 OPI9YLR338W 858 nt13.39□□□□□ -0.27
RRP3P38712 SSA3YBL075C 1950 nt13.25□□□□□ -0.29
RRP3P38712 SAH1YER043C 1350 nt13.19□□□□□ -0.3
RRP3P38712 PUT4YOR348C 1884 nt13.17□□□□□ -0.3
RRP3P38712 SSA1YAL005C 1929 nt13.15□□□□□ -0.3
RRP3P38712 YAL037C-BYAL037C-B 975 nt13.09□□□□□ -0.31
RRP3P38712 YOR139CYOR139C 393 nt13.04□□□□□ -0.32
RRP3P38712 YJR018WYJR018W 363 nt13.02□□□□□ -0.33
RRP3P38712 PUN1YLR414C 792 nt13.02□□□□□ -0.33
RRP3P38712 ARE1YCR048W 1833 nt13.01□□□□□ -0.33
RRP3P38712 SRB2YHR041C 633 nt12.92□□□□□ -0.34
RRP3P38712 NPL3YDR432W 1245 nt12.9□□□□□ -0.34
RRP3P38712 YGR021WYGR021W 873 nt12.9□□□□□ -0.34
RRP3P38712 RPP2BYDR382W 333 nt12.85□□□□□ -0.35
RRP3P38712 YHR049C-AYHR049C-A 297 nt12.83□□□□□ -0.36
RRP3P38712 HOM6YJR139C 1080 nt12.83□□□□□ -0.36
RRP3P38712 WWM1YFL010C 636 nt12.82□□□□□ -0.36
RRP3P38712 YJR120WYJR120W 351 nt12.82□□□□□ -0.36
RRP3P38712 POA1YBR022W 534 nt12.76□□□□□ -0.37
RRP3P38712 PTC2YER089C 1395 nt12.76□□□□□ -0.37
RRP3P38712 MNP1YGL068W 585 nt12.75□□□□□ -0.37
RRP3P38712 YOL037CYOL037C 354 nt12.74□□□□□ -0.37
RRP3P38712 YFL021C-AYFL021C-A 855 nt12.67□□□□□ -0.38
RRP3P38712 BDH2YAL061W 1254 nt12.64□□□□□ -0.39
RRP3P38712 RKM5YLR137W 1104 nt12.64□□□□□ -0.39
RRP3P38712 NAB2YGL122C 1578 nt12.6□□□□□ -0.39
RRP3P38712 INM2YDR287W 879 nt12.56□□□□□ -0.4
RRP3P38712 LSM3YLR438C-A 270 nt12.56□□□□□ -0.4
RRP3P38712 BUD23YCR047C 828 nt12.55□□□□□ -0.4
RRP3P38712 tM(CAU)CtM(CAU)C 72 nt12.54□□□□□ -0.4
RRP3P38712 IMT4tM(CAU)E 72 nt12.54□□□□□ -0.4
RRP3P38712 IMT3tM(CAU)J3 72 nt12.54□□□□□ -0.4
RRP3P38712 IMT1tM(CAU)O1 72 nt12.54□□□□□ -0.4
RRP3P38712 IMT2tM(CAU)P 72 nt12.54□□□□□ -0.4
RRP3P38712 DAL1YIR027C 1383 nt12.47□□□□□ -0.41
RRP3P38712 BSC6YOL137W 1494 nt12.43□□□□□ -0.42
RRP3P38712 YBL100CYBL100C 315 nt12.43□□□□□ -0.42
RRP3P38712 FIS1YIL065C 468 nt12.4□□□□□ -0.42
RRP3P38712 YLR281CYLR281C 468 nt12.39□□□□□ -0.43
RRP3P38712 FPR4YLR449W 1179 nt12.39□□□□□ -0.43
RRP3P38712 TRM9YML014W 840 nt12.36□□□□□ -0.43
RRP3P38712 PUS2YGL063W 1113 nt12.35□□□□□ -0.43
RRP3P38712 PHO4YFR034C 939 nt12.32□□□□□ -0.44
RRP3P38712 WHI5YOR083W 888 nt12.31□□□□□ -0.44
RRP3P38712 FUN26YAL022C 1554 nt12.3□□□□□ -0.44
RRP3P38712 CCT6YDR188W 1641 nt12.22□□□□□ -0.45
RRP3P38712 MOT3YMR070W 1473 nt12.14□□□□□ -0.47
RRP3P38712 IMP2'YIL154C 1041 nt12.13□□□□□ -0.47
RRP3P38712 SUF2tP(AGG)C 72 nt12.12□□□□□ -0.47
RRP3P38712 SUF10tP(AGG)N 72 nt12.12□□□□□ -0.47
RRP3P38712 YLR154C-GYLR154C-G 150 nt12.1□□□□□ -0.47
RRP3P38712 DSK2YMR276W 1122 nt12.09□□□□□ -0.47
RRP3P38712 ALF1YNL148C 765 nt12.08□□□□□ -0.48
RRP3P38712 YPS1YLR120C 1710 nt12.01□□□□□ -0.49
Retrieved 100 of 7,029 protein–RNA pairs in 14.3 ms