RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	RPL1B	P0CX44	217 aa	Known RBP	3.68	□□□□□ -1.82
YAL004W	YAL004W	PYC1	P11154	1178 aa	Known RBP	3.68	□□□□□ -1.82
YAL004W	YAL004W	HMG2	P12684	1045 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	FRS1	P15624	595 aa	Known RBP	3.68	□□□□□ -1.82
YAL004W	YAL004W	SNF5	P18480	905 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	IME1	P21190	360 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	ADE2	P21264	571 aa	Known RBP	3.68	□□□□□ -1.82
YAL004W	YAL004W	ISY1	P21374	235 aa	Predicted RBP	3.68	□□□□□ -1.82
YAL004W	YAL004W	VPS3	P23643	1011 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	CDC15	P27636	974 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	ICL1	P28240	557 aa	Predicted RBP	3.68	□□□□□ -1.82
YAL004W	YAL004W	RRP1	P35178	278 aa	Predicted RBP	3.68	□□□□□ -1.82
YAL004W	YAL004W	KES1	P35844	434 aa	Known RBP	3.68	□□□□□ -1.82
YAL004W	YAL004W	YBL028C	P38202	106 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	TDP1	P38319	544 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	RRT2	P38332	387 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	ERC1	P38767	581 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	YMR124W	P39523	943 aa	Known RBP	3.68	□□□□□ -1.82
YAL004W	YAL004W	AFG3	P39925	761 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	AIM10	P39965	576 aa	Known RBP	3.68	□□□□□ -1.82
YAL004W	YAL004W	PXA1	P41909	870 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	TAH11	P47112	604 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	LCL3	P53153	274 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	SOL4	P53315	255 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	MAL13	P53338	473 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	TRS31	Q03337	283 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	VPS60	Q03390	229 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	RCR2	Q03446	210 aa	Known RBP	3.68	□□□□□ -1.82
YAL004W	YAL004W	EBS1	Q03466	884 aa	Known RBP	3.68	□□□□□ -1.82
YAL004W	YAL004W	YML037C	Q03703	340 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	CSM3	Q04659	317 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	ADY4	Q05955	493 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	AFT2	Q08957	416 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	HMI1	Q12039	706 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	VPS54	Q12071	889 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	SWT1	Q12104	458 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	YDR061W	Q12298	539 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	SUL2	Q12325	893 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	ADF1	Q2V2Q1	113 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	TFB5	Q3E7C1	72 aa	Predicted RBP	3.68	□□□□□ -1.82
YAL004W	YAL004W	VCX1	Q99385	411 aa		3.68	□□□□□ -1.82
YAL004W	YAL004W	FLO1	P32768	1537 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	CYC1	P00044	109 aa	Predicted RBP	3.67	□□□□□ -1.82
YAL004W	YAL004W	TDH1	P00360	332 aa	Known RBP	3.67	□□□□□ -1.82
YAL004W	YAL004W	TAL1	P15019	335 aa	Known RBP	3.67	□□□□□ -1.82
YAL004W	YAL004W	DAP2	P18962	818 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	BUD5	P25300	642 aa	Predicted RBP	3.67	□□□□□ -1.82
YAL004W	YAL004W	CDC20	P26309	610 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	YJU2	P28320	278 aa	Predicted RBP	3.67	□□□□□ -1.82
YAL004W	YAL004W	PMI40	P29952	429 aa	Known RBP	3.67	□□□□□ -1.82
YAL004W	YAL004W	SYN8	P31377	255 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	HMX1	P32339	317 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	YPT7	P32939	208 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	YET1	P35723	206 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	AUR1	P36107	401 aa	Predicted RBP	3.67	□□□□□ -1.82
YAL004W	YAL004W	SLZ1	P40167	298 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	ASG1	P40467	964 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	SSY5	P47002	699 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	EAF6	P47128	113 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	VID30	P53076	958 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	AQR1	P53943	586 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	RPA49	Q01080	415 aa	Predicted RBP	3.67	□□□□□ -1.82
YAL004W	YAL004W	SMA1	Q02651	245 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	YPL108W	Q02872	168 aa	Predicted RBP	3.67	□□□□□ -1.82
YAL004W	YAL004W	MUB1	Q03162	620 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	ABZ2	Q03266	374 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	PPM1	Q04081	328 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	ECM18	Q04623	453 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	SOV1	Q04748	898 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	RQC1	Q05468	723 aa	Known RBP	3.67	□□□□□ -1.82
YAL004W	YAL004W	VPS38	Q05919	439 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	YLR413W	Q06689	675 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	TSR1	Q07381	788 aa	Known RBP	3.67	□□□□□ -1.82
YAL004W	YAL004W	SGO1	Q08490	590 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	BUD7	Q08754	746 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	UBX3	Q12229	455 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	YPT6	Q99260	215 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	YLR278C	Q05854	1341 aa		3.67	□□□□□ -1.82
YAL004W	YAL004W	FLO11	P08640	1367 aa		3.66	□□□□□ -1.82
YAL004W	YAL004W	TPK2	P06245	380 aa		3.66	□□□□□ -1.82
YAL004W	YAL004W	GCD2	P12754	651 aa	Predicted RBP	3.66	□□□□□ -1.82
YAL004W	YAL004W	RPL3	P14126	387 aa	Known RBP	3.66	□□□□□ -1.82
YAL004W	YAL004W	ERG6	P25087	383 aa	Known RBP	3.66	□□□□□ -1.82
YAL004W	YAL004W	NTH1	P32356	751 aa		3.66	□□□□□ -1.82
YAL004W	YAL004W	HXT1	P32465	570 aa		3.66	□□□□□ -1.82
YAL004W	YAL004W	EFB1	P32471	206 aa	Known RBP	3.66	□□□□□ -1.82
YAL004W	YAL004W	CMC1	P36064	111 aa		3.66	□□□□□ -1.82
YAL004W	YAL004W	ERG7	P38604	731 aa		3.66	□□□□□ -1.82
YAL004W	YAL004W	VMA13	P41807	478 aa	Known RBP	3.66	□□□□□ -1.82
YAL004W	YAL004W	DLD2	P46681	530 aa	Known RBP	3.66	□□□□□ -1.82
YAL004W	YAL004W	YGR117C	P53270	476 aa		3.66	□□□□□ -1.82
YAL004W	YAL004W	CAF130	P53280	1122 aa	Predicted RBP	3.66	□□□□□ -1.82
YAL004W	YAL004W	RHO5	P53879	331 aa	Known RBP	3.66	□□□□□ -1.82
YAL004W	YAL004W	INN1	P53901	409 aa		3.66	□□□□□ -1.82
YAL004W	YAL004W	BOP3	P53958	396 aa		3.66	□□□□□ -1.82
YAL004W	YAL004W	ERG5	P54781	538 aa		3.66	□□□□□ -1.82
YAL004W	YAL004W	ROT1	Q03691	256 aa		3.66	□□□□□ -1.82
YAL004W	YAL004W	YDR239C	Q03780	787 aa		3.66	□□□□□ -1.82
YAL004W	YAL004W	SML1	Q04964	104 aa		3.66	□□□□□ -1.82
YAL004W	YAL004W	ADE13	Q05911	482 aa	Known RBP	3.66	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms