RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W SKS1Q12505 502 aa2.43□□□□□ -2.02
SNU114YKL173W DFR1P07807 211 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
SNU114YKL173W SEC15P22224 910 aa2.42□□□□□ -2.02
SNU114YKL173W CNE1P27825 502 aa2.42□□□□□ -2.02
SNU114YKL173W PUP2P32379 260 aa2.42□□□□□ -2.02
SNU114YKL173W UGP1P32861 499 aaKnown RBP2.42□□□□□ -2.02
SNU114YKL173W PMT1P33775 817 aa2.42□□□□□ -2.02
SNU114YKL173W VID24P38263 362 aa2.42□□□□□ -2.02
SNU114YKL173W GND1P38720 489 aaKnown RBP2.42□□□□□ -2.02
SNU114YKL173W PMT6P42934 759 aa2.42□□□□□ -2.02
SNU114YKL173W RAD17P48581 401 aa2.42□□□□□ -2.02
SNU114YKL173W UBP16Q02863 499 aa2.42□□□□□ -2.02
SNU114YKL173W RLM1Q12224 676 aa2.42□□□□□ -2.02
SNU114YKL173W FRE6Q12473 712 aa2.42□□□□□ -2.02
SNU114YKL173W RRP36Q12481 300 aaPredicted RBP2.42□□□□□ -2.02
SNU114YKL173W PDR10P51533 1564 aa2.42□□□□□ -2.02
SNU114YKL173W SPT7P35177 1332 aa2.42□□□□□ -2.02
SNU114YKL173W COX1P00401 534 aa2.42□□□□□ -2.02
SNU114YKL173W KRS1P15180 591 aaKnown RBP2.42□□□□□ -2.02
SNU114YKL173W EST1P17214 699 aaPredicted RBP2.42□□□□□ -2.02
SNU114YKL173W ELO2P25358 347 aa2.42□□□□□ -2.02
SNU114YKL173W YCR051WP25631 222 aa2.42□□□□□ -2.02
SNU114YKL173W PDB1P32473 366 aaKnown RBP2.42□□□□□ -2.02
SNU114YKL173W MRE11P32829 692 aa2.42□□□□□ -2.02
SNU114YKL173W YKL100CP34248 587 aa2.42□□□□□ -2.02
SNU114YKL173W HES1P35843 434 aa2.42□□□□□ -2.02
SNU114YKL173W TCD2P36101 447 aaKnown RBP2.42□□□□□ -2.02
SNU114YKL173W ERC1P38767 581 aa2.42□□□□□ -2.02
SNU114YKL173W VPS41P38959 992 aa2.42□□□□□ -2.02
SNU114YKL173W FUN12P39730 1002 aaKnown RBP2.42□□□□□ -2.02
SNU114YKL173W GCD10P41814 478 aa2.42□□□□□ -2.02
SNU114YKL173W MAF1P41910 395 aa2.42□□□□□ -2.02
SNU114YKL173W SKP2P42843 763 aa2.42□□□□□ -2.02
SNU114YKL173W PEX25Q02969 394 aa2.42□□□□□ -2.02
SNU114YKL173W RQC1Q05468 723 aaKnown RBP2.42□□□□□ -2.02
SNU114YKL173W CRN1Q06440 651 aa2.42□□□□□ -2.02
SNU114YKL173W YLH47Q06493 454 aa2.42□□□□□ -2.02
SNU114YKL173W REX3Q12090 404 aa2.42□□□□□ -2.02
SNU114YKL173W AI5_ALPHAQ9ZZX1 630 aa2.42□□□□□ -2.02
SNU114YKL173W YRF1-4O13559 1382 aa2.42□□□□□ -2.02
SNU114YKL173W GAL80P04387 435 aa2.42□□□□□ -2.02
SNU114YKL173W DAP2P18962 818 aa2.42□□□□□ -2.02
SNU114YKL173W HXT3P32466 567 aaKnown RBP2.42□□□□□ -2.02
SNU114YKL173W UBP11P36026 717 aa2.42□□□□□ -2.02
SNU114YKL173W SIF2P38262 535 aa2.42□□□□□ -2.02
SNU114YKL173W YIP4P53093 235 aa2.42□□□□□ -2.02
SNU114YKL173W KTR5P53966 522 aaPredicted RBP2.42□□□□□ -2.02
SNU114YKL173W RSF1Q05043 376 aa2.42□□□□□ -2.02
SNU114YKL173W VPS38Q05919 439 aa2.42□□□□□ -2.02
SNU114YKL173W LUC7Q07508 261 aaPredicted RBP2.42□□□□□ -2.02
SNU114YKL173W APC5Q08683 685 aa2.42□□□□□ -2.02
SNU114YKL173W RIM20Q12033 661 aa2.42□□□□□ -2.02
SNU114YKL173W ATG29Q12092 213 aa2.42□□□□□ -2.02
SNU114YKL173W LCB4Q12246 624 aa2.42□□□□□ -2.02
SNU114YKL173W YER175W-AQ8TGU4 54 aa2.42□□□□□ -2.02
SNU114YKL173W MRP13P12686 339 aa2.41□□□□□ -2.02
SNU114YKL173W SAT4P25333 603 aaKnown RBP2.41□□□□□ -2.02
SNU114YKL173W NTR2P36118 322 aaPredicted RBP2.41□□□□□ -2.02
SNU114YKL173W PIM1P36775 1133 aa2.41□□□□□ -2.02
SNU114YKL173W ADH5P38113 351 aaKnown RBP2.41□□□□□ -2.02
SNU114YKL173W REG2P38232 338 aa2.41□□□□□ -2.02
SNU114YKL173W YNG2P38806 282 aaKnown RBP2.41□□□□□ -2.02
SNU114YKL173W RTT105P40063 208 aa2.41□□□□□ -2.02
SNU114YKL173W YIL161WP40449 235 aaKnown RBP2.41□□□□□ -2.02
SNU114YKL173W FMS1P50264 508 aa2.41□□□□□ -2.02
SNU114YKL173W TOF1P53840 1238 aa2.41□□□□□ -2.02
SNU114YKL173W PRO2P54885 456 aaKnown RBP2.41□□□□□ -2.02
SNU114YKL173W YAT1P80235 687 aa2.41□□□□□ -2.02
SNU114YKL173W CIK1Q01649 594 aa2.41□□□□□ -2.02
SNU114YKL173W LGE1Q02796 332 aaKnown RBP2.41□□□□□ -2.02
SNU114YKL173W RNH1Q04740 348 aa2.41□□□□□ -2.02
SNU114YKL173W SWA2Q06677 668 aa2.41□□□□□ -2.02
SNU114YKL173W SGT2Q12118 346 aaKnown RBP2.41□□□□□ -2.02
SNU114YKL173W RPN5Q12250 445 aaKnown RBP2.41□□□□□ -2.02
SNU114YKL173W ERG27Q12452 347 aaKnown RBP2.41□□□□□ -2.02
SNU114YKL173W TOP2P06786 1428 aaKnown RBP2.41□□□□□ -2.02
SNU114YKL173W YPK1P12688 680 aaKnown RBP2.41□□□□□ -2.02
SNU114YKL173W CPR2P23285 205 aa2.41□□□□□ -2.02
SNU114YKL173W MGM1P32266 881 aa2.41□□□□□ -2.02
SNU114YKL173W CMC1P36064 111 aa2.41□□□□□ -2.02
SNU114YKL173W ARP1P38696 384 aa2.41□□□□□ -2.02
SNU114YKL173W POP2P39008 433 aa2.41□□□□□ -2.02
SNU114YKL173W SER3P40054 469 aa2.41□□□□□ -2.02
SNU114YKL173W BUD27P43573 796 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
SNU114YKL173W PET130P47065 347 aa2.41□□□□□ -2.02
SNU114YKL173W ECM27P47144 725 aa2.41□□□□□ -2.02
SNU114YKL173W APT1P49435 187 aaKnown RBP2.41□□□□□ -2.02
SNU114YKL173W IMD4P50094 524 aaKnown RBP2.41□□□□□ -2.02
SNU114YKL173W CPR8P53728 308 aa2.41□□□□□ -2.02
SNU114YKL173W MSC1Q03104 513 aa2.41□□□□□ -2.02
SNU114YKL173W GYL1Q04322 720 aa2.41□□□□□ -2.02
SNU114YKL173W UAF30Q08747 228 aa2.41□□□□□ -2.02
SNU114YKL173W PCL8Q08966 492 aa2.41□□□□□ -2.02
SNU114YKL173W PSY3Q12318 242 aa2.41□□□□□ -2.02
SNU114YKL173W AFI1Q99222 893 aa2.41□□□□□ -2.02
SNU114YKL173W BCK1Q01389 1478 aa2.4□□□□□ -2.02
SNU114YKL173W YBR085C-AO43137 85 aa2.4□□□□□ -2.02
SNU114YKL173W GEX1P25596 615 aa2.4□□□□□ -2.02
SNU114YKL173W YIH1P25637 258 aa2.4□□□□□ -2.02
SNU114YKL173W GDA1P32621 518 aa2.4□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms