RNA–Protein interactions for RNA: YFL002W-B

YFL002W-B, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YFL002W-B, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFL002W-BYFL002W-B SPE2P21182 396 aa3.28□□□□□ -1.88
YFL002W-BYFL002W-B PHD1P36093 366 aa3.28□□□□□ -1.88
YFL002W-BYFL002W-B AUR1P36107 401 aaPredicted RBP3.28□□□□□ -1.88
YFL002W-BYFL002W-B SGM1P47166 707 aa3.28□□□□□ -1.88
YFL002W-BYFL002W-B PYK2P52489 506 aaKnown RBP3.28□□□□□ -1.88
YFL002W-BYFL002W-B YPL014WQ02606 381 aa3.28□□□□□ -1.88
YFL002W-BYFL002W-B YML037CQ03703 340 aa3.28□□□□□ -1.88
YFL002W-BYFL002W-B YMR087WQ04299 284 aa3.28□□□□□ -1.88
YFL002W-BYFL002W-B YKU80Q04437 629 aa3.28□□□□□ -1.88
YFL002W-BYFL002W-B RSF1Q05043 376 aa3.28□□□□□ -1.88
YFL002W-BYFL002W-B YLR352WQ06479 807 aa3.28□□□□□ -1.88
YFL002W-BYFL002W-B YPL272CQ08984 517 aa3.28□□□□□ -1.88
YFL002W-BYFL002W-B LEU9Q12166 604 aaKnown RBP3.28□□□□□ -1.88
YFL002W-BYFL002W-B PUT2P07275 575 aa3.27□□□□□ -1.89
YFL002W-BYFL002W-B PDA1P16387 420 aaKnown RBP3.27□□□□□ -1.89
YFL002W-BYFL002W-B SAN1P22470 610 aa3.27□□□□□ -1.89
YFL002W-BYFL002W-B ATS1P31386 333 aa3.27□□□□□ -1.89
YFL002W-BYFL002W-B ERG1P32476 496 aaKnown RBP3.27□□□□□ -1.89
YFL002W-BYFL002W-B MTR2P34232 184 aaKnown RBP3.27□□□□□ -1.89
YFL002W-BYFL002W-B SGS1P35187 1447 aa3.27□□□□□ -1.89
YFL002W-BYFL002W-B FMP46P36141 133 aaKnown RBP3.27□□□□□ -1.89
YFL002W-BYFL002W-B YNG2P38806 282 aaKnown RBP3.27□□□□□ -1.89
YFL002W-BYFL002W-B AFG3P39925 761 aa3.27□□□□□ -1.89
YFL002W-BYFL002W-B AXL1P40851 1208 aa3.27□□□□□ -1.89
YFL002W-BYFL002W-B GUF1P46943 645 aa3.27□□□□□ -1.89
YFL002W-BYFL002W-B DSD1P53095 428 aa3.27□□□□□ -1.89
YFL002W-BYFL002W-B BUD32P53323 261 aa3.27□□□□□ -1.89
YFL002W-BYFL002W-B SMM1P53720 384 aaKnown RBP3.27□□□□□ -1.89
YFL002W-BYFL002W-B TDA7P53882 636 aaPredicted RBP3.27□□□□□ -1.89
YFL002W-BYFL002W-B MSC1Q03104 513 aa3.27□□□□□ -1.89
YFL002W-BYFL002W-B TAH18Q12181 623 aa3.27□□□□□ -1.89
YFL002W-BYFL002W-B PDH1Q12428 516 aaKnown RBP3.27□□□□□ -1.89
YFL002W-BYFL002W-B YBR126W-AQ8TGU7 68 aa3.27□□□□□ -1.89
YFL002W-BYFL002W-B ARG81P05085 880 aa3.26□□□□□ -1.89
YFL002W-BYFL002W-B MRP13P12686 339 aa3.26□□□□□ -1.89
YFL002W-BYFL002W-B AAC3P18238 307 aa3.26□□□□□ -1.89
YFL002W-BYFL002W-B CMK1P27466 446 aaKnown RBP3.26□□□□□ -1.89
YFL002W-BYFL002W-B ACH1P32316 526 aa3.26□□□□□ -1.89
YFL002W-BYFL002W-B RPN2P32565 945 aaKnown RBP3.26□□□□□ -1.89
YFL002W-BYFL002W-B RIM2P38127 377 aa3.26□□□□□ -1.89
YFL002W-BYFL002W-B RKM3P38222 552 aa3.26□□□□□ -1.89
YFL002W-BYFL002W-B SGN1P40561 250 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
YFL002W-BYFL002W-B YIR014WP40570 242 aa3.26□□□□□ -1.89
YFL002W-BYFL002W-B ERG26P53199 349 aaKnown RBP3.26□□□□□ -1.89
YFL002W-BYFL002W-B DUG3P53871 357 aa3.26□□□□□ -1.89
YFL002W-BYFL002W-B DAP1Q12091 152 aa3.26□□□□□ -1.89
YFL002W-BYFL002W-B MRS3P10566 314 aa3.25□□□□□ -1.89
YFL002W-BYFL002W-B EST1P17214 699 aaPredicted RBP3.25□□□□□ -1.89
YFL002W-BYFL002W-B PRE8P23639 250 aa3.25□□□□□ -1.89
YFL002W-BYFL002W-B ADH7P25377 361 aa3.25□□□□□ -1.89
YFL002W-BYFL002W-B IMG1P25626 169 aa3.25□□□□□ -1.89
YFL002W-BYFL002W-B SPC34P36131 295 aa3.25□□□□□ -1.89
YFL002W-BYFL002W-B CUL3P53202 744 aa3.25□□□□□ -1.89
YFL002W-BYFL002W-B YVH1Q02256 364 aaKnown RBP3.25□□□□□ -1.89
YFL002W-BYFL002W-B MSS11Q03825 758 aa3.25□□□□□ -1.89
YFL002W-BYFL002W-B YLR281CQ05863 155 aa3.25□□□□□ -1.89
YFL002W-BYFL002W-B OPY2Q06810 360 aa3.25□□□□□ -1.89
YFL002W-BYFL002W-B LUC7Q07508 261 aaPredicted RBP3.25□□□□□ -1.89
YFL002W-BYFL002W-B PUP3P25451 205 aaKnown RBP3.24□□□□□ -1.89
YFL002W-BYFL002W-B PAH1P32567 862 aa3.24□□□□□ -1.89
YFL002W-BYFL002W-B YBL055CP34220 418 aaPredicted RBP3.24□□□□□ -1.89
YFL002W-BYFL002W-B NUP133P36161 1157 aa3.24□□□□□ -1.89
YFL002W-BYFL002W-B AGP2P38090 596 aa3.24□□□□□ -1.89
YFL002W-BYFL002W-B PTR3P43606 678 aa3.24□□□□□ -1.89
YFL002W-BYFL002W-B UPF3P48412 387 aaKnown RBP3.24□□□□□ -1.89
YFL002W-BYFL002W-B DRN1P53255 507 aaKnown RBP3.24□□□□□ -1.89
YFL002W-BYFL002W-B EFM6P53970 246 aa3.24□□□□□ -1.89
YFL002W-BYFL002W-B BUD22Q04347 519 aaKnown RBP3.24□□□□□ -1.89
YFL002W-BYFL002W-B YTH1Q06102 208 aaPredicted RBP3.24□□□□□ -1.89
YFL002W-BYFL002W-B SSK1Q07084 712 aa3.24□□□□□ -1.89
YFL002W-BYFL002W-B YDL057WQ07379 328 aa3.24□□□□□ -1.89
YFL002W-BYFL002W-B YIH1P25637 258 aa3.23□□□□□ -1.89
YFL002W-BYFL002W-B TIF3P34167 436 aaKnown RBP3.23□□□□□ -1.89
YFL002W-BYFL002W-B RPL32P38061 130 aaKnown RBP3.23□□□□□ -1.89
YFL002W-BYFL002W-B YBL029WP38201 376 aa3.23□□□□□ -1.89
YFL002W-BYFL002W-B KRE9P39005 276 aa3.23□□□□□ -1.89
YFL002W-BYFL002W-B RGI2P40188 164 aa3.23□□□□□ -1.89
YFL002W-BYFL002W-B YJL068CP40363 299 aa3.23□□□□□ -1.89
YFL002W-BYFL002W-B IPI3P53877 555 aa3.23□□□□□ -1.89
YFL002W-BYFL002W-B NKP1Q12493 238 aa3.23□□□□□ -1.89
YFL002W-BYFL002W-B ENT1Q12518 454 aa3.23□□□□□ -1.89
YFL002W-BYFL002W-B MF(ALPHA)1P01149 165 aa3.22□□□□□ -1.89
YFL002W-BYFL002W-B DPB3P27344 201 aa3.22□□□□□ -1.89
YFL002W-BYFL002W-B YKL100CP34248 587 aa3.22□□□□□ -1.89
YFL002W-BYFL002W-B ICS2P38284 255 aa3.22□□□□□ -1.89
YFL002W-BYFL002W-B LAG1P38703 411 aa3.22□□□□□ -1.89
YFL002W-BYFL002W-B CCT6P39079 546 aa3.22□□□□□ -1.89
YFL002W-BYFL002W-B VPS52P39904 641 aa3.22□□□□□ -1.89
YFL002W-BYFL002W-B SNG1P46950 547 aa3.22□□□□□ -1.89
YFL002W-BYFL002W-B YMR160WQ03823 816 aa3.22□□□□□ -1.89
YFL002W-BYFL002W-B COQ9Q05779 260 aa3.22□□□□□ -1.89
YFL002W-BYFL002W-B NCE102Q12207 173 aaRIP-Chip data3.22□□□□□ -1.89not detected
YFL002W-BYFL002W-B YML002WP0CF17 737 aa3.21□□□□□ -1.89
YFL002W-BYFL002W-B TYR1P20049 452 aa3.21□□□□□ -1.89
YFL002W-BYFL002W-B BUD5P25300 642 aaPredicted RBP3.21□□□□□ -1.89
YFL002W-BYFL002W-B SSE2P32590 693 aaKnown RBP3.21□□□□□ -1.89
YFL002W-BYFL002W-B YBR144CP34215 104 aa3.21□□□□□ -1.89
YFL002W-BYFL002W-B MIC60P36112 540 aa3.21□□□□□ -1.89
YFL002W-BYFL002W-B RTT107P38850 1070 aa3.21□□□□□ -1.89
YFL002W-BYFL002W-B YJL070CP40361 888 aa3.21□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms