RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeastyeast

Gene VMA22, Length 546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA22YHR060W CUL3P53202 744 aa4.53□□□□□ -1.68
VMA22YHR060W MAK10Q02197 733 aa4.53□□□□□ -1.68
VMA22YHR060W PRP42Q03776 544 aaKnown RBP4.53□□□□□ -1.68
VMA22YHR060W YDR239CQ03780 787 aa4.53□□□□□ -1.68
VMA22YHR060W VPS38Q05919 439 aa4.53□□□□□ -1.68
VMA22YHR060W VTA1Q06263 330 aa4.53□□□□□ -1.68
VMA22YHR060W LUC7Q07508 261 aaPredicted RBP4.53□□□□□ -1.68
VMA22YHR060W CUE5Q08412 411 aaKnown RBP4.53□□□□□ -1.68
VMA22YHR060W APL4Q12028 832 aa4.53□□□□□ -1.68
VMA22YHR060W YPT6Q99260 215 aa4.53□□□□□ -1.68
VMA22YHR060W CET1O13297 549 aaPredicted RBP4.52□□□□□ -1.69
VMA22YHR060W PMA1P05030 918 aaKnown RBP4.52□□□□□ -1.69
VMA22YHR060W YML002WP0CF17 737 aa4.52□□□□□ -1.69
VMA22YHR060W STE12P13574 688 aa4.52□□□□□ -1.69
VMA22YHR060W PDB1P32473 366 aaKnown RBP4.52□□□□□ -1.69
VMA22YHR060W RRF1P38771 230 aa4.52□□□□□ -1.69
VMA22YHR060W FMO1P38866 432 aa4.52□□□□□ -1.69
VMA22YHR060W FUN12P39730 1002 aaKnown RBP4.52□□□□□ -1.69
VMA22YHR060W BUD16P39988 312 aa4.52□□□□□ -1.69
VMA22YHR060W RFX1P48743 811 aa4.52□□□□□ -1.69
VMA22YHR060W TWF1P53250 332 aa4.52□□□□□ -1.69
VMA22YHR060W DCP2P53550 970 aaKnown RBP4.52□□□□□ -1.69
VMA22YHR060W RIA1P53893 1110 aa4.52□□□□□ -1.69
VMA22YHR060W BOP3P53958 396 aa4.52□□□□□ -1.69
VMA22YHR060W ADA2Q02336 434 aa4.52□□□□□ -1.69
VMA22YHR060W INA17Q02888 182 aa4.52□□□□□ -1.69
VMA22YHR060W ARG7Q04728 441 aa4.52□□□□□ -1.69
VMA22YHR060W RSF1Q05043 376 aa4.52□□□□□ -1.69
VMA22YHR060W YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69not detected
VMA22YHR060W FMP40Q08968 688 aaPredicted RBP4.52□□□□□ -1.69
VMA22YHR060W BAG7Q12128 409 aa4.52□□□□□ -1.69
VMA22YHR060W NFI1Q12216 726 aa4.52□□□□□ -1.69
VMA22YHR060W FRE6Q12473 712 aa4.52□□□□□ -1.69
VMA22YHR060W YOL159C-AQ3E769 90 aa4.52□□□□□ -1.69
VMA22YHR060W YER175W-AQ8TGU4 54 aa4.52□□□□□ -1.69
VMA22YHR060W AFI1Q99222 893 aa4.52□□□□□ -1.69
VMA22YHR060W YOR019WQ99248 730 aa4.52□□□□□ -1.69
VMA22YHR060W CAF20P12962 161 aaKnown RBP4.51□□□□□ -1.69
VMA22YHR060W KAR4P25583 335 aa4.51□□□□□ -1.69
VMA22YHR060W SMI1P32566 505 aa4.51□□□□□ -1.69
VMA22YHR060W NIP100P33420 868 aa4.51□□□□□ -1.69
VMA22YHR060W TRM2P33753 639 aa4.51□□□□□ -1.69
VMA22YHR060W MSE1P48525 536 aa4.51□□□□□ -1.69
VMA22YHR060W CTR1P49573 406 aa4.51□□□□□ -1.69
VMA22YHR060W BNI5P53890 448 aaKnown RBP4.51□□□□□ -1.69
VMA22YHR060W NCS2P53923 493 aaPredicted RBP4.51□□□□□ -1.69
VMA22YHR060W SLU7Q02775 382 aaKnown RBP4.51□□□□□ -1.69
VMA22YHR060W KAP120Q02932 1032 aa4.51□□□□□ -1.69
VMA22YHR060W DLT1Q04216 342 aa4.51□□□□□ -1.69
VMA22YHR060W STP3Q05937 343 aa4.51□□□□□ -1.69
VMA22YHR060W YSH1Q06224 779 aaPredicted RBP4.51□□□□□ -1.69
VMA22YHR060W RRP9Q06506 573 aaKnown RBP4.51□□□□□ -1.69
VMA22YHR060W BUD7Q08754 746 aa4.51□□□□□ -1.69
VMA22YHR060W TGS1Q12052 315 aa4.51□□□□□ -1.69
VMA22YHR060W SPE3Q12074 293 aaKnown RBP4.51□□□□□ -1.69
VMA22YHR060W CTF3Q12748 733 aa4.51□□□□□ -1.69
VMA22YHR060W TY1B-AO13527 1196 aaKnown RBP4.5□□□□□ -1.69
VMA22YHR060W YML003WP0CF16 290 aa4.5□□□□□ -1.69
VMA22YHR060W APE1P14904 514 aa4.5□□□□□ -1.69
VMA22YHR060W GLK1P17709 500 aaKnown RBP4.5□□□□□ -1.69
VMA22YHR060W RRP7P25368 297 aaPredicted RBP4.5□□□□□ -1.69
VMA22YHR060W URA7P28274 579 aaKnown RBP4.5□□□□□ -1.69
VMA22YHR060W MSP1P28737 362 aa4.5□□□□□ -1.69
VMA22YHR060W SIP1P32578 815 aa4.5□□□□□ -1.69
VMA22YHR060W LTV1P34078 463 aa4.5□□□□□ -1.69
VMA22YHR060W SEF1P34228 1148 aa4.5□□□□□ -1.69
VMA22YHR060W LOT5P34234 306 aa4.5□□□□□ -1.69
VMA22YHR060W LAS1P36146 502 aaPredicted RBP4.5□□□□□ -1.69
VMA22YHR060W DAD2P36162 133 aa4.5□□□□□ -1.69
VMA22YHR060W CTP1P38152 299 aa4.5□□□□□ -1.69
VMA22YHR060W YHR054CP38780 354 aa4.5□□□□□ -1.69
VMA22YHR060W PKP1P40530 394 aa4.5□□□□□ -1.69
VMA22YHR060W CCT7P42943 550 aaKnown RBP4.5□□□□□ -1.69
VMA22YHR060W CAK1P43568 368 aaPredicted RBP4.5□□□□□ -1.69
VMA22YHR060W DLD2P46681 530 aaKnown RBP4.5□□□□□ -1.69
VMA22YHR060W UBX6P47049 396 aa4.5□□□□□ -1.69
VMA22YHR060W MPS3P47069 682 aa4.5□□□□□ -1.69
VMA22YHR060W MNP1P53163 194 aaPredicted RBP4.5□□□□□ -1.69
VMA22YHR060W SPC98P53540 846 aa4.5□□□□□ -1.69
VMA22YHR060W YNL144CP53907 740 aa4.5□□□□□ -1.69
VMA22YHR060W YPL107WQ02873 248 aa4.5□□□□□ -1.69
VMA22YHR060W EFR3Q03653 782 aaKnown RBP4.5□□□□□ -1.69
VMA22YHR060W ROY1Q04847 553 aa4.5□□□□□ -1.69
VMA22YHR060W MRD1Q06106 887 aaKnown RBP4.5□□□□□ -1.69
VMA22YHR060W IZH3Q07959 543 aa4.5□□□□□ -1.69
VMA22YHR060W REX3Q12090 404 aa4.5□□□□□ -1.69
VMA22YHR060W NTO1Q12311 748 aa4.5□□□□□ -1.69
VMA22YHR060W GPM3Q12326 303 aa4.5□□□□□ -1.69
VMA22YHR060W SPE4Q12455 300 aa4.5□□□□□ -1.69
VMA22YHR060W SEC39Q12745 709 aa4.5□□□□□ -1.69
VMA22YHR060W KGD2P19262 463 aaPredicted RBP4.49□□□□□ -1.69
VMA22YHR060W APN1P22936 367 aa4.49□□□□□ -1.69
VMA22YHR060W PHO84P25297 587 aaKnown RBP4.49□□□□□ -1.69
VMA22YHR060W ADH7P25377 361 aa4.49□□□□□ -1.69
VMA22YHR060W PMI40P29952 429 aaKnown RBP4.49□□□□□ -1.69
VMA22YHR060W MRE11P32829 692 aa4.49□□□□□ -1.69
VMA22YHR060W HCS1P34243 683 aa4.49□□□□□ -1.69
VMA22YHR060W GEX2P36173 615 aa4.49□□□□□ -1.69
VMA22YHR060W ALG5P40350 334 aa4.49□□□□□ -1.69
VMA22YHR060W ATF1P40353 525 aa4.49□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms