Protein–RNA interactions for Protein: P43568

CAK1, Serine/threonine-protein kinase CAK1, yeastyeast

Predicted RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAK1P43568 NSR1YGR159C 1245 nt18.91■□□□□ 0.62
CAK1P43568 YML009W-BYML009W-B 477 nt18.72■□□□□ 0.59
CAK1P43568 NOP1YDL014W 984 nt18.03■□□□□ 0.48
CAK1P43568 MDJ1YFL016C 1536 nt17.14■□□□□ 0.33
CAK1P43568 YKL036CYKL036C 393 nt16.34■□□□□ 0.21
CAK1P43568 SRX1YKL086W 384 nt15.78■□□□□ 0.12
CAK1P43568 YJL027CYJL027C 417 nt15.74■□□□□ 0.11
CAK1P43568 Q0297Q0297 156 nt15.71■□□□□ 0.11
CAK1P43568 DBP2YNL112W 1641 nt15.06■□□□□ 0
CAK1P43568 YCR051WYCR051W 669 nt14.93□□□□□ -0.02
CAK1P43568 SCS3YGL126W 1143 nt14.72□□□□□ -0.05
CAK1P43568 YBR190WYBR190W 312 nt14.68□□□□□ -0.06
CAK1P43568 TRN1tP(UGG)A 72 nt14.5□□□□□ -0.09
CAK1P43568 SUF9tP(UGG)F 72 nt14.5□□□□□ -0.09
CAK1P43568 SUF8tP(UGG)H 72 nt14.5□□□□□ -0.09
CAK1P43568 tP(UGG)LtP(UGG)L 72 nt14.5□□□□□ -0.09
CAK1P43568 SUF7tP(UGG)M 72 nt14.5□□□□□ -0.09
CAK1P43568 tP(UGG)N1tP(UGG)N1 72 nt14.5□□□□□ -0.09
CAK1P43568 tP(UGG)N2tP(UGG)N2 72 nt14.5□□□□□ -0.09
CAK1P43568 tP(UGG)O1tP(UGG)O1 72 nt14.5□□□□□ -0.09
CAK1P43568 SUF11tP(UGG)O2 72 nt14.5□□□□□ -0.09
CAK1P43568 CCC1YLR220W 969 nt14.32□□□□□ -0.12
CAK1P43568 RTC3YHR087W 336 nt14.3□□□□□ -0.12
CAK1P43568 YOL085CYOL085C 342 nt14.2□□□□□ -0.14
CAK1P43568 RPP1BYDL130W 321 nt14.09□□□□□ -0.15
CAK1P43568 PKP1YIL042C 1185 nt14.02□□□□□ -0.17
CAK1P43568 RVS167YDR388W 1449 nt13.98□□□□□ -0.17
CAK1P43568 SCJ1YMR214W 1134 nt13.92□□□□□ -0.18
CAK1P43568 PUT4YOR348C 1884 nt13.64□□□□□ -0.23
CAK1P43568 SSA3YBL075C 1950 nt13.61□□□□□ -0.23
CAK1P43568 tP(UGG)O3tP(UGG)O3 72 nt13.6□□□□□ -0.23
CAK1P43568 PET122YER153C 765 nt13.53□□□□□ -0.24
CAK1P43568 SHR5YOL110W 714 nt13.45□□□□□ -0.26
CAK1P43568 URN1YPR152C 1398 nt13.3□□□□□ -0.28
CAK1P43568 ARE1YCR048W 1833 nt13.29□□□□□ -0.28
CAK1P43568 SCR1SCR1 522 nt13.22□□□□□ -0.29
CAK1P43568 DEP1YAL013W 1218 nt13.2□□□□□ -0.3
CAK1P43568 SAH1YER043C 1350 nt13.19□□□□□ -0.3
CAK1P43568 OPI9YLR338W 858 nt13.18□□□□□ -0.3
CAK1P43568 POA1YBR022W 534 nt13.16□□□□□ -0.3
CAK1P43568 YDJ1YNL064C 1230 nt13.15□□□□□ -0.3
CAK1P43568 RRN5YLR141W 1092 nt13.1□□□□□ -0.31
CAK1P43568 YHR049C-AYHR049C-A 297 nt13.08□□□□□ -0.32
CAK1P43568 ATS1YAL020C 1002 nt13.07□□□□□ -0.32
CAK1P43568 RPN10YHR200W 807 nt12.97□□□□□ -0.33
CAK1P43568 BSC6YOL137W 1494 nt12.94□□□□□ -0.34
CAK1P43568 YNL208WYNL208W 600 nt12.94□□□□□ -0.34
CAK1P43568 GAR1YHR089C 618 nt12.9□□□□□ -0.34
CAK1P43568 YER088W-BYER088W-B 147 nt12.84□□□□□ -0.35
CAK1P43568 PUN1YLR414C 792 nt12.76□□□□□ -0.37
CAK1P43568 BUD23YCR047C 828 nt12.73□□□□□ -0.37
CAK1P43568 PTC2YER089C 1395 nt12.69□□□□□ -0.38
CAK1P43568 RSB1YOR049C 1065 nt12.69□□□□□ -0.38
CAK1P43568 SPT5YML010W 3192 nt12.67□□□□□ -0.38
CAK1P43568 YJR018WYJR018W 363 nt12.66□□□□□ -0.38
CAK1P43568 NAB2YGL122C 1578 nt12.56□□□□□ -0.4
CAK1P43568 TIR1YER011W 765 nt12.49□□□□□ -0.41
CAK1P43568 YJR120WYJR120W 351 nt12.47□□□□□ -0.41
CAK1P43568 SSA1YAL005C 1929 nt12.45□□□□□ -0.42
CAK1P43568 FIS1YIL065C 468 nt12.38□□□□□ -0.43
CAK1P43568 DAL1YIR027C 1383 nt12.33□□□□□ -0.44
CAK1P43568 Q0182Q0182 405 nt12.33□□□□□ -0.44
CAK1P43568 SSA4YER103W 1929 nt12.31□□□□□ -0.44
CAK1P43568 FPR4YLR449W 1179 nt12.28□□□□□ -0.44
CAK1P43568 RPP2BYDR382W 333 nt12.27□□□□□ -0.45
CAK1P43568 INM2YDR287W 879 nt12.23□□□□□ -0.45
CAK1P43568 PHO4YFR034C 939 nt12.23□□□□□ -0.45
CAK1P43568 SRB2YHR041C 633 nt12.22□□□□□ -0.45
CAK1P43568 MEP2YNL142W 1500 nt12.19□□□□□ -0.46
CAK1P43568 PST2YDR032C 597 nt12.18□□□□□ -0.46
CAK1P43568 YPS1YLR120C 1710 nt12.12□□□□□ -0.47
CAK1P43568 YBL100CYBL100C 315 nt12.07□□□□□ -0.48
CAK1P43568 BDH2YAL061W 1254 nt12.01□□□□□ -0.49
CAK1P43568 DCW1YKL046C 1350 nt12.01□□□□□ -0.49
CAK1P43568 YDR095CYDR095C 411 nt12□□□□□ -0.49
CAK1P43568 YHR165W-AYHR165W-A 312 nt11.98□□□□□ -0.49
CAK1P43568 FUN26YAL022C 1554 nt11.93□□□□□ -0.5
CAK1P43568 BDF1YLR399C 2061 nt11.9□□□□□ -0.5
CAK1P43568 WWM1YFL010C 636 nt11.9□□□□□ -0.5
CAK1P43568 EMI2YDR516C 1503 nt11.82□□□□□ -0.52
CAK1P43568 TRM9YML014W 840 nt11.82□□□□□ -0.52
CAK1P43568 PTP1YDL230W 1008 nt11.8□□□□□ -0.52
CAK1P43568 ALF1YNL148C 765 nt11.79□□□□□ -0.52
CAK1P43568 LSM3YLR438C-A 270 nt11.78□□□□□ -0.52
CAK1P43568 SHU1YHL006C 453 nt11.77□□□□□ -0.53
CAK1P43568 CAC2YML102W 1407 nt11.77□□□□□ -0.53
CAK1P43568 RPP2AYOL039W 321 nt11.75□□□□□ -0.53
CAK1P43568 CCT6YDR188W 1641 nt11.75□□□□□ -0.53
CAK1P43568 YBR220CYBR220C 1683 nt11.74□□□□□ -0.53
CAK1P43568 TAT1YBR069C 1860 nt11.73□□□□□ -0.53
CAK1P43568 YDL221WYDL221W 552 nt11.71□□□□□ -0.53
CAK1P43568 YAL037C-BYAL037C-B 975 nt11.7□□□□□ -0.54
CAK1P43568 YMR090WYMR090W 684 nt11.7□□□□□ -0.54
CAK1P43568 YFL021C-AYFL021C-A 855 nt11.69□□□□□ -0.54
CAK1P43568 YGR021WYGR021W 873 nt11.68□□□□□ -0.54
CAK1P43568 SIS1YNL007C 1059 nt11.68□□□□□ -0.54
CAK1P43568 HOM6YJR139C 1080 nt11.67□□□□□ -0.54
CAK1P43568 SDH1YKL148C 1923 nt11.63□□□□□ -0.55
CAK1P43568 MOT3YMR070W 1473 nt11.63□□□□□ -0.55
CAK1P43568 SUF2tP(AGG)C 72 nt11.62□□□□□ -0.55
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms