Protein–RNA interactions for Protein: P53540

SPC98, Spindle pole body component SPC98, yeastyeast

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPC98P53540 YML009W-BYML009W-B 477 nt21.85■■□□□ 1.09
SPC98P53540 NSR1YGR159C 1245 nt21.46■■□□□ 1.03
SPC98P53540 NOP1YDL014W 984 nt21.31■■□□□ 1
SPC98P53540 YKL036CYKL036C 393 nt19.92■□□□□ 0.78
SPC98P53540 MDJ1YFL016C 1536 nt18.86■□□□□ 0.61
SPC98P53540 Q0297Q0297 156 nt18.75■□□□□ 0.59
SPC98P53540 YJL027CYJL027C 417 nt18.65■□□□□ 0.58
SPC98P53540 SRX1YKL086W 384 nt18.63■□□□□ 0.57
SPC98P53540 SCS3YGL126W 1143 nt18.27■□□□□ 0.52
SPC98P53540 YCR051WYCR051W 669 nt17.69■□□□□ 0.42
SPC98P53540 YOL085CYOL085C 342 nt17.25■□□□□ 0.35
SPC98P53540 PKP1YIL042C 1185 nt16.96■□□□□ 0.31
SPC98P53540 RPP1BYDL130W 321 nt16.83■□□□□ 0.28
SPC98P53540 DBP2YNL112W 1641 nt16.78■□□□□ 0.28
SPC98P53540 TRN1tP(UGG)A 72 nt16.73■□□□□ 0.27
SPC98P53540 SUF9tP(UGG)F 72 nt16.73■□□□□ 0.27
SPC98P53540 SUF8tP(UGG)H 72 nt16.73■□□□□ 0.27
SPC98P53540 tP(UGG)LtP(UGG)L 72 nt16.73■□□□□ 0.27
SPC98P53540 SUF7tP(UGG)M 72 nt16.73■□□□□ 0.27
SPC98P53540 tP(UGG)N1tP(UGG)N1 72 nt16.73■□□□□ 0.27
SPC98P53540 tP(UGG)N2tP(UGG)N2 72 nt16.73■□□□□ 0.27
SPC98P53540 tP(UGG)O1tP(UGG)O1 72 nt16.73■□□□□ 0.27
SPC98P53540 SUF11tP(UGG)O2 72 nt16.73■□□□□ 0.27
SPC98P53540 CCC1YLR220W 969 nt16.53■□□□□ 0.24
SPC98P53540 SCJ1YMR214W 1134 nt16.48■□□□□ 0.23
SPC98P53540 ATS1YAL020C 1002 nt16.4■□□□□ 0.22
SPC98P53540 PET122YER153C 765 nt16.06■□□□□ 0.16
SPC98P53540 YBR190WYBR190W 312 nt15.98■□□□□ 0.15
SPC98P53540 SCR1SCR1 522 nt15.94■□□□□ 0.14
SPC98P53540 tP(UGG)O3tP(UGG)O3 72 nt15.89■□□□□ 0.13
SPC98P53540 RVS167YDR388W 1449 nt15.82■□□□□ 0.12
SPC98P53540 RTC3YHR087W 336 nt15.64■□□□□ 0.09
SPC98P53540 RRN5YLR141W 1092 nt15.61■□□□□ 0.09
SPC98P53540 RSB1YOR049C 1065 nt15.37■□□□□ 0.05
SPC98P53540 YDJ1YNL064C 1230 nt15.36■□□□□ 0.05
SPC98P53540 SHR5YOL110W 714 nt15.34■□□□□ 0.05
SPC98P53540 YER088W-BYER088W-B 147 nt15.31■□□□□ 0.04
SPC98P53540 PST2YDR032C 597 nt15.14■□□□□ 0.01
SPC98P53540 GAR1YHR089C 618 nt14.98□□□□□ -0.01
SPC98P53540 DEP1YAL013W 1218 nt14.81□□□□□ -0.04
SPC98P53540 URN1YPR152C 1398 nt14.74□□□□□ -0.05
SPC98P53540 YKL097CYKL097C 411 nt14.69□□□□□ -0.06
SPC98P53540 YNL208WYNL208W 600 nt14.62□□□□□ -0.07
SPC98P53540 RPN10YHR200W 807 nt14.58□□□□□ -0.08
SPC98P53540 SHU1YHL006C 453 nt14.48□□□□□ -0.09
SPC98P53540 OPI9YLR338W 858 nt14.48□□□□□ -0.09
SPC98P53540 TIR1YER011W 765 nt14.47□□□□□ -0.09
SPC98P53540 PUT4YOR348C 1884 nt14.33□□□□□ -0.11
SPC98P53540 SAH1YER043C 1350 nt14.33□□□□□ -0.12
SPC98P53540 SSA1YAL005C 1929 nt14.26□□□□□ -0.13
SPC98P53540 ARE1YCR048W 1833 nt14.16□□□□□ -0.14
SPC98P53540 YAL037C-BYAL037C-B 975 nt14.16□□□□□ -0.14
SPC98P53540 SRB2YHR041C 633 nt14.09□□□□□ -0.15
SPC98P53540 YJR018WYJR018W 363 nt14.08□□□□□ -0.16
SPC98P53540 PUN1YLR414C 792 nt14.07□□□□□ -0.16
SPC98P53540 YOR139CYOR139C 393 nt14.06□□□□□ -0.16
SPC98P53540 SSA3YBL075C 1950 nt14.03□□□□□ -0.16
SPC98P53540 YHR049C-AYHR049C-A 297 nt13.98□□□□□ -0.17
SPC98P53540 YJR120WYJR120W 351 nt13.96□□□□□ -0.17
SPC98P53540 POA1YBR022W 534 nt13.89□□□□□ -0.19
SPC98P53540 WWM1YFL010C 636 nt13.88□□□□□ -0.19
SPC98P53540 YGR021WYGR021W 873 nt13.88□□□□□ -0.19
SPC98P53540 NPL3YDR432W 1245 nt13.87□□□□□ -0.19
SPC98P53540 RPP2BYDR382W 333 nt13.86□□□□□ -0.19
SPC98P53540 HOM6YJR139C 1080 nt13.86□□□□□ -0.19
SPC98P53540 PTC2YER089C 1395 nt13.84□□□□□ -0.19
SPC98P53540 MNP1YGL068W 585 nt13.84□□□□□ -0.19
SPC98P53540 YOL037CYOL037C 354 nt13.7□□□□□ -0.22
SPC98P53540 BUD23YCR047C 828 nt13.66□□□□□ -0.22
SPC98P53540 YFL021C-AYFL021C-A 855 nt13.66□□□□□ -0.22
SPC98P53540 RKM5YLR137W 1104 nt13.65□□□□□ -0.22
SPC98P53540 BDH2YAL061W 1254 nt13.63□□□□□ -0.23
SPC98P53540 NAB2YGL122C 1578 nt13.62□□□□□ -0.23
SPC98P53540 BSC6YOL137W 1494 nt13.55□□□□□ -0.24
SPC98P53540 INM2YDR287W 879 nt13.53□□□□□ -0.24
SPC98P53540 DAL1YIR027C 1383 nt13.51□□□□□ -0.25
SPC98P53540 FIS1YIL065C 468 nt13.5□□□□□ -0.25
SPC98P53540 LSM3YLR438C-A 270 nt13.5□□□□□ -0.25
SPC98P53540 tM(CAU)CtM(CAU)C 72 nt13.48□□□□□ -0.25
SPC98P53540 IMT4tM(CAU)E 72 nt13.48□□□□□ -0.25
SPC98P53540 IMT3tM(CAU)J3 72 nt13.48□□□□□ -0.25
SPC98P53540 IMT1tM(CAU)O1 72 nt13.48□□□□□ -0.25
SPC98P53540 IMT2tM(CAU)P 72 nt13.48□□□□□ -0.25
SPC98P53540 FPR4YLR449W 1179 nt13.47□□□□□ -0.25
SPC98P53540 YBL100CYBL100C 315 nt13.47□□□□□ -0.25
SPC98P53540 PHO4YFR034C 939 nt13.39□□□□□ -0.27
SPC98P53540 YLR281CYLR281C 468 nt13.35□□□□□ -0.27
SPC98P53540 FUN26YAL022C 1554 nt13.32□□□□□ -0.28
SPC98P53540 TRM9YML014W 840 nt13.31□□□□□ -0.28
SPC98P53540 PUS2YGL063W 1113 nt13.29□□□□□ -0.28
SPC98P53540 WHI5YOR083W 888 nt13.27□□□□□ -0.29
SPC98P53540 CCT6YDR188W 1641 nt13.19□□□□□ -0.3
SPC98P53540 MOT3YMR070W 1473 nt13.07□□□□□ -0.32
SPC98P53540 YLR154C-GYLR154C-G 150 nt13.06□□□□□ -0.32
SPC98P53540 ALF1YNL148C 765 nt13.06□□□□□ -0.32
SPC98P53540 SUF2tP(AGG)C 72 nt13.05□□□□□ -0.32
SPC98P53540 SUF10tP(AGG)N 72 nt13.05□□□□□ -0.32
SPC98P53540 DSK2YMR276W 1122 nt13.03□□□□□ -0.32
SPC98P53540 YPS1YLR120C 1710 nt13.02□□□□□ -0.32
SPC98P53540 YPR011CYPR011C 981 nt13.01□□□□□ -0.33
Retrieved 100 of 7,029 protein–RNA pairs in 15 ms