Protein–RNA interactions for Protein: Q08412

CUE5, Ubiquitin-binding protein CUE5, yeastyeast

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE5Q08412 NSR1YGR159C 1245 nt20.69■□□□□ 0.9
CUE5Q08412 YML009W-BYML009W-B 477 nt20.68■□□□□ 0.9
CUE5Q08412 NOP1YDL014W 984 nt19.98■□□□□ 0.79
CUE5Q08412 MDJ1YFL016C 1536 nt18.63■□□□□ 0.57
CUE5Q08412 YKL036CYKL036C 393 nt18.24■□□□□ 0.51
CUE5Q08412 SRX1YKL086W 384 nt17.45■□□□□ 0.38
CUE5Q08412 Q0297Q0297 156 nt17.4■□□□□ 0.38
CUE5Q08412 YJL027CYJL027C 417 nt17.16■□□□□ 0.34
CUE5Q08412 YCR051WYCR051W 669 nt16.58■□□□□ 0.24
CUE5Q08412 SCS3YGL126W 1143 nt16.49■□□□□ 0.23
CUE5Q08412 DBP2YNL112W 1641 nt16.36■□□□□ 0.21
CUE5Q08412 TRN1tP(UGG)A 72 nt15.91■□□□□ 0.14
CUE5Q08412 SUF9tP(UGG)F 72 nt15.91■□□□□ 0.14
CUE5Q08412 SUF8tP(UGG)H 72 nt15.91■□□□□ 0.14
CUE5Q08412 tP(UGG)LtP(UGG)L 72 nt15.91■□□□□ 0.14
CUE5Q08412 SUF7tP(UGG)M 72 nt15.91■□□□□ 0.14
CUE5Q08412 tP(UGG)N1tP(UGG)N1 72 nt15.91■□□□□ 0.14
CUE5Q08412 tP(UGG)N2tP(UGG)N2 72 nt15.91■□□□□ 0.14
CUE5Q08412 tP(UGG)O1tP(UGG)O1 72 nt15.91■□□□□ 0.14
CUE5Q08412 SUF11tP(UGG)O2 72 nt15.91■□□□□ 0.14
CUE5Q08412 YBR190WYBR190W 312 nt15.89■□□□□ 0.13
CUE5Q08412 YOL085CYOL085C 342 nt15.82■□□□□ 0.12
CUE5Q08412 CCC1YLR220W 969 nt15.81■□□□□ 0.12
CUE5Q08412 PKP1YIL042C 1185 nt15.65■□□□□ 0.1
CUE5Q08412 RPP1BYDL130W 321 nt15.63■□□□□ 0.09
CUE5Q08412 RTC3YHR087W 336 nt15.59■□□□□ 0.09
CUE5Q08412 RVS167YDR388W 1449 nt15.34■□□□□ 0.05
CUE5Q08412 SCJ1YMR214W 1134 nt15.24■□□□□ 0.03
CUE5Q08412 tP(UGG)O3tP(UGG)O3 72 nt15□□□□□ -0.01
CUE5Q08412 PET122YER153C 765 nt14.98□□□□□ -0.01
CUE5Q08412 SCR1SCR1 522 nt14.75□□□□□ -0.05
CUE5Q08412 SHR5YOL110W 714 nt14.75□□□□□ -0.05
CUE5Q08412 ATS1YAL020C 1002 nt14.69□□□□□ -0.06
CUE5Q08412 PUT4YOR348C 1884 nt14.61□□□□□ -0.07
CUE5Q08412 RRN5YLR141W 1092 nt14.54□□□□□ -0.08
CUE5Q08412 URN1YPR152C 1398 nt14.49□□□□□ -0.09
CUE5Q08412 YDJ1YNL064C 1230 nt14.47□□□□□ -0.09
CUE5Q08412 DEP1YAL013W 1218 nt14.46□□□□□ -0.09
CUE5Q08412 SAH1YER043C 1350 nt14.3□□□□□ -0.12
CUE5Q08412 OPI9YLR338W 858 nt14.29□□□□□ -0.12
CUE5Q08412 ARE1YCR048W 1833 nt14.28□□□□□ -0.12
CUE5Q08412 GAR1YHR089C 618 nt14.25□□□□□ -0.13
CUE5Q08412 YER088W-BYER088W-B 147 nt14.24□□□□□ -0.13
CUE5Q08412 RPN10YHR200W 807 nt14.2□□□□□ -0.14
CUE5Q08412 RSB1YOR049C 1065 nt14.18□□□□□ -0.14
CUE5Q08412 POA1YBR022W 534 nt14.17□□□□□ -0.14
CUE5Q08412 YNL208WYNL208W 600 nt14.16□□□□□ -0.14
CUE5Q08412 YHR049C-AYHR049C-A 297 nt14.13□□□□□ -0.15
CUE5Q08412 SSA3YBL075C 1950 nt14.1□□□□□ -0.15
CUE5Q08412 BSC6YOL137W 1494 nt13.89□□□□□ -0.19
CUE5Q08412 PUN1YLR414C 792 nt13.88□□□□□ -0.19
CUE5Q08412 BUD23YCR047C 828 nt13.8□□□□□ -0.2
CUE5Q08412 YJR018WYJR018W 363 nt13.8□□□□□ -0.2
CUE5Q08412 PTC2YER089C 1395 nt13.79□□□□□ -0.2
CUE5Q08412 TIR1YER011W 765 nt13.75□□□□□ -0.21
CUE5Q08412 SSA1YAL005C 1929 nt13.64□□□□□ -0.23
CUE5Q08412 PST2YDR032C 597 nt13.63□□□□□ -0.23
CUE5Q08412 NAB2YGL122C 1578 nt13.6□□□□□ -0.23
CUE5Q08412 YJR120WYJR120W 351 nt13.54□□□□□ -0.24
CUE5Q08412 RPP2BYDR382W 333 nt13.47□□□□□ -0.25
CUE5Q08412 FPR4YLR449W 1179 nt13.41□□□□□ -0.26
CUE5Q08412 FIS1YIL065C 468 nt13.4□□□□□ -0.26
CUE5Q08412 SRB2YHR041C 633 nt13.39□□□□□ -0.27
CUE5Q08412 DAL1YIR027C 1383 nt13.39□□□□□ -0.27
CUE5Q08412 SPT5YML010W 3192 nt13.32□□□□□ -0.28
CUE5Q08412 INM2YDR287W 879 nt13.32□□□□□ -0.28
CUE5Q08412 PHO4YFR034C 939 nt13.28□□□□□ -0.28
CUE5Q08412 YBL100CYBL100C 315 nt13.18□□□□□ -0.3
CUE5Q08412 SHU1YHL006C 453 nt13.14□□□□□ -0.31
CUE5Q08412 BDH2YAL061W 1254 nt13.14□□□□□ -0.31
CUE5Q08412 WWM1YFL010C 636 nt13.13□□□□□ -0.31
CUE5Q08412 YPS1YLR120C 1710 nt13.07□□□□□ -0.32
CUE5Q08412 YAL037C-BYAL037C-B 975 nt13.05□□□□□ -0.32
CUE5Q08412 MEP2YNL142W 1500 nt13.03□□□□□ -0.32
CUE5Q08412 FUN26YAL022C 1554 nt13.02□□□□□ -0.33
CUE5Q08412 YKL097CYKL097C 411 nt12.99□□□□□ -0.33
CUE5Q08412 YHR165W-AYHR165W-A 312 nt12.98□□□□□ -0.33
CUE5Q08412 SSA4YER103W 1929 nt12.97□□□□□ -0.33
CUE5Q08412 YDR095CYDR095C 411 nt12.95□□□□□ -0.34
CUE5Q08412 YGR021WYGR021W 873 nt12.95□□□□□ -0.34
CUE5Q08412 TRM9YML014W 840 nt12.95□□□□□ -0.34
CUE5Q08412 LSM3YLR438C-A 270 nt12.92□□□□□ -0.34
CUE5Q08412 HOM6YJR139C 1080 nt12.91□□□□□ -0.34
CUE5Q08412 ALF1YNL148C 765 nt12.89□□□□□ -0.35
CUE5Q08412 YFL021C-AYFL021C-A 855 nt12.88□□□□□ -0.35
CUE5Q08412 DCW1YKL046C 1350 nt12.86□□□□□ -0.35
CUE5Q08412 MNP1YGL068W 585 nt12.85□□□□□ -0.35
CUE5Q08412 CCT6YDR188W 1641 nt12.8□□□□□ -0.36
CUE5Q08412 Q0182Q0182 405 nt12.79□□□□□ -0.36
CUE5Q08412 SUF2tP(AGG)C 72 nt12.72□□□□□ -0.37
CUE5Q08412 SUF10tP(AGG)N 72 nt12.72□□□□□ -0.37
CUE5Q08412 RKM5YLR137W 1104 nt12.72□□□□□ -0.37
CUE5Q08412 RPP2AYOL039W 321 nt12.72□□□□□ -0.37
CUE5Q08412 PTP1YDL230W 1008 nt12.69□□□□□ -0.38
CUE5Q08412 EMI2YDR516C 1503 nt12.68□□□□□ -0.38
CUE5Q08412 SIS1YNL007C 1059 nt12.66□□□□□ -0.38
CUE5Q08412 CAC2YML102W 1407 nt12.64□□□□□ -0.39
CUE5Q08412 YMR090WYMR090W 684 nt12.59□□□□□ -0.39
CUE5Q08412 YDL221WYDL221W 552 nt12.56□□□□□ -0.4
CUE5Q08412 ART5YGR068C 1761 nt12.52□□□□□ -0.41
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms