RNA–Protein interactions for RNA: ENSMUST00000228044.1

Ldb3-208, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 BASIC

Gene Ldb3, Length 1,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-208ENSMUST00000228044 Bean1Q9EQG5 255 aa9.21□□□□□ -0.94
Ldb3-208ENSMUST00000228044 Gm21886J3QJU9 214 aa9.19□□□□□ -0.94
Ldb3-208ENSMUST00000228044 Hectd4E9Q2E4 4418 aa9.18□□□□□ -0.94
Ldb3-208ENSMUST00000228044 Pkhd1E9PZ36 4059 aa9.17□□□□□ -0.94
Ldb3-208ENSMUST00000228044 Dph3Q8K0W9 82 aa9.17□□□□□ -0.94
Ldb3-208ENSMUST00000228044 Rpl37aP61514 92 aa9.17□□□□□ -0.94
Ldb3-208ENSMUST00000228044 Lrp1bQ9JI18 4599 aa9.15□□□□□ -0.95
Ldb3-208ENSMUST00000228044 Brk1Q91VR8 75 aa9.15□□□□□ -0.95
Ldb3-208ENSMUST00000228044 Ryr2E9Q401 4966 aaKnown RBP9.13□□□□□ -0.95
Ldb3-208ENSMUST00000228044 Gm20604F8WIA3 75 aa9.12□□□□□ -0.95
Ldb3-208ENSMUST00000228044 Fam229bQ8CF36 80 aa9.12□□□□□ -0.95
Ldb3-208ENSMUST00000228044 Naa38Q9D2U5 125 aa9.12□□□□□ -0.95
Ldb3-208ENSMUST00000228044 Igkv8-19A0A0G2JFN8 121 aa9.11□□□□□ -0.95
Ldb3-208ENSMUST00000228044 Pet100P0DJE0 76 aa9.08□□□□□ -0.96
Ldb3-208ENSMUST00000228044 Reg3aO09037 175 aa9.08□□□□□ -0.96
Ldb3-208ENSMUST00000228044 B230307C23RikQ8BLB2 64 aa9.08□□□□□ -0.96
Ldb3-208ENSMUST00000228044 Prr15lQ8JZM2 100 aa9.08□□□□□ -0.96
Ldb3-208ENSMUST00000228044 Gm16253D3Z167 63 aa9.06□□□□□ -0.96
Ldb3-208ENSMUST00000228044 SnurfQ9WU12 71 aa9.02□□□□□ -0.96
Ldb3-208ENSMUST00000228044 Fat2Q5F226 4351 aa9.01□□□□□ -0.97
Ldb3-208ENSMUST00000228044 A530084C06RikQ3UTW2 186 aa9□□□□□ -0.97
Ldb3-208ENSMUST00000228044 BikO70337 150 aa9□□□□□ -0.97
Ldb3-208ENSMUST00000228044 Sec61gP60060 68 aa8.98□□□□□ -0.97
Ldb3-208ENSMUST00000228044 Gm2310J3QNJ2 377 aa8.96□□□□□ -0.97
Ldb3-208ENSMUST00000228044 RetnlbQ99P86 105 aa8.96□□□□□ -0.97
Ldb3-208ENSMUST00000228044 Spaca4Q80ZQ0 127 aa8.95□□□□□ -0.98
Ldb3-208ENSMUST00000228044 SacsQ9JLC8 4582 aa8.94□□□□□ -0.98
Ldb3-208ENSMUST00000228044 Spink8Q09TK9 105 aa8.94□□□□□ -0.98
Ldb3-208ENSMUST00000228044 Pkhd1l1Q80ZA4 4249 aa8.91□□□□□ -0.98
Ldb3-208ENSMUST00000228044 Sox16Q62247 57 aa8.9□□□□□ -0.98
Ldb3-208ENSMUST00000228044 A0A286YE49 62 aa8.89□□□□□ -0.99
Ldb3-208ENSMUST00000228044 Spint4Q9D263 159 aa8.88□□□□□ -0.99
Ldb3-208ENSMUST00000228044 Ryr1E9PZQ0 5035 aa8.88□□□□□ -0.99
Ldb3-208ENSMUST00000228044 Defb12Q8K4N3 78 aa8.87□□□□□ -0.99
Ldb3-208ENSMUST00000228044 Igkv3-3A0A140T8Q0 119 aa8.85□□□□□ -0.99
Ldb3-208ENSMUST00000228044 Vps13bQ80TY5 3993 aa8.85□□□□□ -0.99
Ldb3-208ENSMUST00000228044 Cdc42se1Q8BHL7 80 aa8.84□□□□□ -0.99
Ldb3-208ENSMUST00000228044 Kmt2cQ8BRH4 4903 aa8.84□□□□□ -0.99
Ldb3-208ENSMUST00000228044 Cypt15B1AXS0 87 aa8.81□□□□□ -1
Ldb3-208ENSMUST00000228044 Krtap19-5O08632 62 aa8.8□□□□□ -1
Ldb3-208ENSMUST00000228044 1700074P13RikQ9D9G7 251 aa8.76□□□□□ -1.01
Ldb3-208ENSMUST00000228044 Dnah8Q91XQ0 4731 aa8.75□□□□□ -1.01
Ldb3-208ENSMUST00000228044 Rps29P62274 56 aa8.73□□□□□ -1.01
Ldb3-208ENSMUST00000228044 4933415A04RikQ9D443 101 aa8.73□□□□□ -1.01
Ldb3-208ENSMUST00000228044 Lrp1Q91ZX7 4545 aaKnown RBP8.72□□□□□ -1.01
Ldb3-208ENSMUST00000228044 Gm10160F6Y577 67 aa8.7□□□□□ -1.02
Ldb3-208ENSMUST00000228044 Coa6Q8BGD8 79 aa8.7□□□□□ -1.02
Ldb3-208ENSMUST00000228044 Gm10197F6QEY5 67 aa8.68□□□□□ -1.02
Ldb3-208ENSMUST00000228044 Gm10267M0QWD8 85 aa8.67□□□□□ -1.02
Ldb3-208ENSMUST00000228044 Gm10643Q3URG9 111 aa8.67□□□□□ -1.02
Ldb3-208ENSMUST00000228044 Fat3Q8BNA6 4555 aa8.66□□□□□ -1.02
Ldb3-208ENSMUST00000228044 Atox1O08997 68 aaKnown RBP8.66□□□□□ -1.02
Ldb3-208ENSMUST00000228044 Defb13Q8R2I4 64 aa8.66□□□□□ -1.02
Ldb3-208ENSMUST00000228044 Abca13Q5SSE9 5034 aa8.58□□□□□ -1.04
Ldb3-208ENSMUST00000228044 D6Ertd527eA0A0N4SWI3 464 aa8.57□□□□□ -1.04
Ldb3-208ENSMUST00000228044 Coa5Q99M07 74 aa8.56□□□□□ -1.04
Ldb3-208ENSMUST00000228044 Chtf8P0CG14 533 aa8.55□□□□□ -1.04
Ldb3-208ENSMUST00000228044 Gm11939A2A592 99 aa8.55□□□□□ -1.04
Ldb3-208ENSMUST00000228044 Gm26620Q9CY65 116 aa8.55□□□□□ -1.04
Ldb3-208ENSMUST00000228044 Phxr4P15974 95 aa8.53□□□□□ -1.04
Ldb3-208ENSMUST00000228044 1700042G07RikB1AUF7 90 aa8.51□□□□□ -1.05
Ldb3-208ENSMUST00000228044 Gm9736A0A1W2P7N1 277 aa8.51□□□□□ -1.05
Ldb3-208ENSMUST00000228044 Herc2Q4U2R1 4836 aa8.45□□□□□ -1.06
Ldb3-208ENSMUST00000228044 Krtap3-2Q9D638 99 aa8.45□□□□□ -1.06
Ldb3-208ENSMUST00000228044 Krtap3-3Q9D7P0 99 aa8.45□□□□□ -1.06
Ldb3-208ENSMUST00000228044 Defb38Q7TNV7 63 aa8.45□□□□□ -1.06
Ldb3-208ENSMUST00000228044 Dnhd1D3Z2X2 4750 aa8.44□□□□□ -1.06
Ldb3-208ENSMUST00000228044 Birc6O88738 4882 aa8.44□□□□□ -1.06
Ldb3-208ENSMUST00000228044 Kiaa1109A2AAE1 5005 aa8.42□□□□□ -1.06
Ldb3-208ENSMUST00000228044 Mycbp2Q7TPH6 4711 aa8.41□□□□□ -1.06
Ldb3-208ENSMUST00000228044 Gm5767A0A0J9YTU8 78 aa8.39□□□□□ -1.07
Ldb3-208ENSMUST00000228044 Gm21798J3QNU5 87 aa8.36□□□□□ -1.07
Ldb3-208ENSMUST00000228044 9230102O04RikA2ASX7 82 aa8.34□□□□□ -1.07
Ldb3-208ENSMUST00000228044 Gm5965D3Z724 196 aa8.34□□□□□ -1.07
Ldb3-208ENSMUST00000228044 Gm10999F6Q4M4 69 aa8.32□□□□□ -1.08
Ldb3-208ENSMUST00000228044 Gm3646F6S692 53 aa8.3□□□□□ -1.08
Ldb3-208ENSMUST00000228044 A930033H14RikG5E8X6 103 aa8.3□□□□□ -1.08
Ldb3-208ENSMUST00000228044 Q8BGJ3 129 aa8.3□□□□□ -1.08
Ldb3-208ENSMUST00000228044 Gm4491E0CX42 125 aa8.26□□□□□ -1.09
Ldb3-208ENSMUST00000228044 Ndufb1P0DN34 57 aa8.26□□□□□ -1.09
Ldb3-208ENSMUST00000228044 2310034C09RikQ9D746 214 aa8.23□□□□□ -1.09
Ldb3-208ENSMUST00000228044 HydinQ80W93 5154 aa8.23□□□□□ -1.09
Ldb3-208ENSMUST00000228044 2310079G19RikQ9D6L6 185 aa8.22□□□□□ -1.09
Ldb3-208ENSMUST00000228044 Krtap15-1Q9QZU5 150 aa8.17□□□□□ -1.1
Ldb3-208ENSMUST00000228044 SptssbQ925E8 76 aa8.16□□□□□ -1.1
Ldb3-208ENSMUST00000228044 Rpl37Q9D823 97 aa8.16□□□□□ -1.1
Ldb3-208ENSMUST00000228044 Limd2Q8BGB5 128 aa8.14□□□□□ -1.11
Ldb3-208ENSMUST00000228044 4930507D05RikQ8C9C9 103 aa8.14□□□□□ -1.11
Ldb3-208ENSMUST00000228044 Gm20661K7N787 53 aa8.12□□□□□ -1.11
Ldb3-208ENSMUST00000228044 Gm9821Q8K076 103 aa8.09□□□□□ -1.12
Ldb3-208ENSMUST00000228044 Lrp2A2ARV4 4660 aa8.08□□□□□ -1.12
Ldb3-208ENSMUST00000228044 Rnase13Q5GAM7 153 aa8.06□□□□□ -1.12
Ldb3-208ENSMUST00000228044 Uqcr11Q9CPX8 56 aa8.04□□□□□ -1.12
Ldb3-208ENSMUST00000228044 PcloQ9QYX7 5068 aa8.04□□□□□ -1.12
Ldb3-208ENSMUST00000228044 Defb1P56386 69 aa8.02□□□□□ -1.13
Ldb3-208ENSMUST00000228044 Ndufs5Q99LY9 106 aa7.98□□□□□ -1.13
Ldb3-208ENSMUST00000228044 Lce1mQ9CR91 182 aa7.94□□□□□ -1.14
Ldb3-208ENSMUST00000228044 Gm17416Q30KP4 66 aa7.92□□□□□ -1.14
Ldb3-208ENSMUST00000228044 Pla2g10Q9QXX3 151 aa7.85□□□□□ -1.15
Ldb3-208ENSMUST00000228044 Cox6b2Q80ZN9 88 aa7.83□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 53.7 ms