RNA–Protein interactions for RNA: ENSMUST00000113705.7

Tpm1-215, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,759 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-215ENSMUST00000113705 4930535I16RikQ9CUI2 172 aa8.99□□□□□ -0.97
Tpm1-215ENSMUST00000113705 Fam240bJ3QMB3 78 aa8.95□□□□□ -0.98
Tpm1-215ENSMUST00000113705 Ighv10-3A0A075B5T6 119 aa8.94□□□□□ -0.98
Tpm1-215ENSMUST00000113705 Gm12353A2AGJ4 60 aa8.94□□□□□ -0.98
Tpm1-215ENSMUST00000113705 Gm10197F6QEY5 67 aa8.93□□□□□ -0.98
Tpm1-215ENSMUST00000113705 Igkv8-28A0A0G2JE47 121 aa8.92□□□□□ -0.98
Tpm1-215ENSMUST00000113705 Igkv8-27A0A0G2JF28 120 aa8.91□□□□□ -0.98
Tpm1-215ENSMUST00000113705 Igkv8-30A0A140T8M3 121 aa8.91□□□□□ -0.98
Tpm1-215ENSMUST00000113705 Xcl1P47993 114 aa8.9□□□□□ -0.98
Tpm1-215ENSMUST00000113705 Gm9821Q8K076 103 aa8.9□□□□□ -0.98
Tpm1-215ENSMUST00000113705 Gm10308Q9CVR5 141 aa8.89□□□□□ -0.99
Tpm1-215ENSMUST00000113705 Krtap15-1Q9QZU5 150 aa8.89□□□□□ -0.99
Tpm1-215ENSMUST00000113705 2310057N15RikQ9D6T8 200 aa8.87□□□□□ -0.99
Tpm1-215ENSMUST00000113705 Gm44790A0A0N4SV91 103 aa8.84□□□□□ -0.99
Tpm1-215ENSMUST00000113705 Sprr2jO70561 109 aa8.84□□□□□ -0.99
Tpm1-215ENSMUST00000113705 Trav14d-3-dv8A0A075B619 120 aa8.84□□□□□ -1
Tpm1-215ENSMUST00000113705 Rbm3O89086 153 aaKnown RBP8.83□□□□□ -1
Tpm1-215ENSMUST00000113705 Lyrm7Q9DA03 104 aa8.82□□□□□ -1
Tpm1-215ENSMUST00000113705 Trav3-1Q5R1I8 114 aa8.81□□□□□ -1
Tpm1-215ENSMUST00000113705 Defa21Q8C1P2 93 aa8.81□□□□□ -1
Tpm1-215ENSMUST00000113705 Cypt15B1AXS0 87 aa8.81□□□□□ -1
Tpm1-215ENSMUST00000113705 Pde6gP09174 87 aa8.79□□□□□ -1
Tpm1-215ENSMUST00000113705 Crct1Q6PAI5 102 aa8.78□□□□□ -1
Tpm1-215ENSMUST00000113705 Krtap1-3A2A588 173 aa8.76□□□□□ -1.01
Tpm1-215ENSMUST00000113705 C130032M10RikQ8C888 123 aa8.75□□□□□ -1.01
Tpm1-215ENSMUST00000113705 Ormdl1Q921I0 153 aa8.75□□□□□ -1.01
Tpm1-215ENSMUST00000113705 Mrpl34Q99N91 92 aa8.73□□□□□ -1.01
Tpm1-215ENSMUST00000113705 UqcrqQ9CQ69 82 aa8.73□□□□□ -1.01
Tpm1-215ENSMUST00000113705 Gm26620Q9CY65 116 aa8.73□□□□□ -1.01
Tpm1-215ENSMUST00000113705 Cby1Q9D1C2 127 aa8.73□□□□□ -1.01
Tpm1-215ENSMUST00000113705 Sec61bQ9CQS8 96 aaKnown RBP8.72□□□□□ -1.01
Tpm1-215ENSMUST00000113705 Igkv3-3A0A140T8Q0 119 aa8.71□□□□□ -1.01
Tpm1-215ENSMUST00000113705 Tmem213Q08EA8 116 aa8.71□□□□□ -1.01
Tpm1-215ENSMUST00000113705 ZanO88799 5376 aa8.7□□□□□ -1.02
Tpm1-215ENSMUST00000113705 BatfO35284 125 aa8.69□□□□□ -1.02
Tpm1-215ENSMUST00000113705 Reg3aO09037 175 aa8.68□□□□□ -1.02
Tpm1-215ENSMUST00000113705 Gm11563B1AQ90 168 aa8.67□□□□□ -1.02
Tpm1-215ENSMUST00000113705 Krtap4-7Q9D732 168 aa8.67□□□□□ -1.02
Tpm1-215ENSMUST00000113705 2310034C09RikQ9D746 214 aa8.65□□□□□ -1.02
Tpm1-215ENSMUST00000113705 Rpl37Q9D823 97 aa8.65□□□□□ -1.02
Tpm1-215ENSMUST00000113705 Fat4Q2PZL6 4981 aa8.64□□□□□ -1.03
Tpm1-215ENSMUST00000113705 Gm37013Q8K491 104 aa8.63□□□□□ -1.03
Tpm1-215ENSMUST00000113705 Ubl5Q9EPV8 73 aa8.63□□□□□ -1.03
Tpm1-215ENSMUST00000113705 SvipQ3UZP4 77 aa8.6□□□□□ -1.03
Tpm1-215ENSMUST00000113705 Tmem254aP0DN89 123 aa8.59□□□□□ -1.03
Tpm1-215ENSMUST00000113705 Tmem254bP0DN90 123 aa8.59□□□□□ -1.03
Tpm1-215ENSMUST00000113705 Tmem254cP0DN91 123 aa8.59□□□□□ -1.03
Tpm1-215ENSMUST00000113705 LorP18165 486 aa8.58□□□□□ -1.04
Tpm1-215ENSMUST00000113705 MplkipQ9D011 178 aa8.56□□□□□ -1.04
Tpm1-215ENSMUST00000113705 Atp5eP56382 52 aa8.53□□□□□ -1.04
Tpm1-215ENSMUST00000113705 Gm10267M0QWD8 85 aa8.53□□□□□ -1.04
Tpm1-215ENSMUST00000113705 BikO70337 150 aa8.53□□□□□ -1.04
Tpm1-215ENSMUST00000113705 Igkv8-19A0A0G2JFN8 121 aa8.52□□□□□ -1.05
Tpm1-215ENSMUST00000113705 Defb13Q8R2I4 64 aa8.51□□□□□ -1.05
Tpm1-215ENSMUST00000113705 Gm10318A0A1W2P728 225 aa8.49□□□□□ -1.05
Tpm1-215ENSMUST00000113705 Rnf213E9Q555 5152 aaKnown RBP8.47□□□□□ -1.05
Tpm1-215ENSMUST00000113705 7530416G11RikJ3QJX6 159 aa8.45□□□□□ -1.06
Tpm1-215ENSMUST00000113705 Hist1h4aP62806 103 aaKnown RBP8.45□□□□□ -1.06
Tpm1-215ENSMUST00000113705 Krtap16-3Q8C1I6 86 aa8.45□□□□□ -1.06
Tpm1-215ENSMUST00000113705 Scgb1b2O35176 93 aa8.43□□□□□ -1.06
Tpm1-215ENSMUST00000113705 Anapc13Q8R034 74 aa8.43□□□□□ -1.06
Tpm1-215ENSMUST00000113705 Rnase13Q5GAM7 153 aa8.41□□□□□ -1.06
Tpm1-215ENSMUST00000113705 Krtap19-3Q925H6 87 aa8.41□□□□□ -1.06
Tpm1-215ENSMUST00000113705 Krtap19-1Q925H2 87 aa8.4□□□□□ -1.06
Tpm1-215ENSMUST00000113705 Gm19402J3QJV4 266 aa8.37□□□□□ -1.07
Tpm1-215ENSMUST00000113705 Apoc4Q61268 124 aa8.37□□□□□ -1.07
Tpm1-215ENSMUST00000113705 Ndufc1Q9CQY9 76 aa8.33□□□□□ -1.08
Tpm1-215ENSMUST00000113705 Prr15lQ8JZM2 100 aa8.32□□□□□ -1.08
Tpm1-215ENSMUST00000113705 Fam229bQ8CF36 80 aa8.3□□□□□ -1.08
Tpm1-215ENSMUST00000113705 Gm11555B1AQ89 175 aa8.29□□□□□ -1.08
Tpm1-215ENSMUST00000113705 1700042G07RikB1AUF7 90 aa8.29□□□□□ -1.08
Tpm1-215ENSMUST00000113705 Sox16Q62247 57 aa8.28□□□□□ -1.08
Tpm1-215ENSMUST00000113705 Fam229aB2KGE5 128 aa8.25□□□□□ -1.09
Tpm1-215ENSMUST00000113705 Gm10061D3Z714 54 aa8.24□□□□□ -1.09
Tpm1-215ENSMUST00000113705 4930518I15RikQ3V2W7 57 aa8.22□□□□□ -1.09
Tpm1-215ENSMUST00000113705 A0A1Y7VJH8 109 aa8.2□□□□□ -1.1
Tpm1-215ENSMUST00000113705 9230102O04RikA2ASX7 82 aa8.2□□□□□ -1.1
Tpm1-215ENSMUST00000113705 Krtap4-2B1AQ85 167 aa8.2□□□□□ -1.1
Tpm1-215ENSMUST00000113705 Serp2Q6TAW2 65 aa8.2□□□□□ -1.1
Tpm1-215ENSMUST00000113705 Gm4491E0CX42 125 aa8.2□□□□□ -1.1
Tpm1-215ENSMUST00000113705 Spink8Q09TK9 105 aa8.19□□□□□ -1.1
Tpm1-215ENSMUST00000113705 A0A286YE49 62 aa8.18□□□□□ -1.1
Tpm1-215ENSMUST00000113705 Samd13D3YUG0 102 aa8.18□□□□□ -1.1
Tpm1-215ENSMUST00000113705 Naa38Q9D2U5 125 aa8.18□□□□□ -1.1
Tpm1-215ENSMUST00000113705 Krtap1-4Q3V2D6 188 aa8.17□□□□□ -1.1
Tpm1-215ENSMUST00000113705 Gm28539A0A087WSL9 92 aa8.12□□□□□ -1.11
Tpm1-215ENSMUST00000113705 Gm17416Q30KP4 66 aa8.12□□□□□ -1.11
Tpm1-215ENSMUST00000113705 SspoQ8CG65 4998 aa8.11□□□□□ -1.11
Tpm1-215ENSMUST00000113705 Gm11569B1AQB1 180 aa8.07□□□□□ -1.12
Tpm1-215ENSMUST00000113705 Chtf8P0CG14 533 aa8.06□□□□□ -1.12
Tpm1-215ENSMUST00000113705 B230307C23RikQ8BLB2 64 aa8.05□□□□□ -1.12
Tpm1-215ENSMUST00000113705 1700074P13RikQ9D9G7 251 aa8.05□□□□□ -1.12
Tpm1-215ENSMUST00000113705 Krtap13-1Q8K198 168 aa8.02□□□□□ -1.13
Tpm1-215ENSMUST00000113705 Q8BGJ3 129 aa8.01□□□□□ -1.13
Tpm1-215ENSMUST00000113705 Gm10999F6Q4M4 69 aa7.99□□□□□ -1.13
Tpm1-215ENSMUST00000113705 Coa6Q8BGD8 79 aa7.96□□□□□ -1.14
Tpm1-215ENSMUST00000113705 Atox1O08997 68 aaKnown RBP7.95□□□□□ -1.14
Tpm1-215ENSMUST00000113705 Pcp4P63054 62 aa7.95□□□□□ -1.14
Tpm1-215ENSMUST00000113705 Defb38Q7TNV7 63 aa7.94□□□□□ -1.14
Tpm1-215ENSMUST00000113705 Spint4Q9D263 159 aa7.94□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 141.8 ms