RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 2310050C09RikG5E8Z3 280 aa9.67□□□□□ -0.86
Ckap4-201ENSMUST00000053871 NbdyA0A0N4SUI7 68 aa9.62□□□□□ -0.87
Ckap4-201ENSMUST00000053871 Gm28374F6SG70 93 aa9.61□□□□□ -0.87
Ckap4-201ENSMUST00000053871 Igkv3-3A0A140T8Q0 119 aa9.6□□□□□ -0.87
Ckap4-201ENSMUST00000053871 Dnah7aE9Q0T8 4024 aa9.6□□□□□ -0.87
Ckap4-201ENSMUST00000053871 Defb39Q70KL3 74 aa9.59□□□□□ -0.87
Ckap4-201ENSMUST00000053871 Krtap14O08640 167 aa9.57□□□□□ -0.88
Ckap4-201ENSMUST00000053871 Znf706Q9D115 76 aaKnown RBP9.57□□□□□ -0.88
Ckap4-201ENSMUST00000053871 Cypt14J3QPF7 87 aa9.56□□□□□ -0.88
Ckap4-201ENSMUST00000053871 Gm10160F6Y577 67 aa9.55□□□□□ -0.88
Ckap4-201ENSMUST00000053871 Wfdc3Q14AE4 130 aa9.55□□□□□ -0.88
Ckap4-201ENSMUST00000053871 Defb11Q8R2I7 77 aa9.54□□□□□ -0.88
Ckap4-201ENSMUST00000053871 Bean1Q9EQG5 255 aa9.54□□□□□ -0.88
Ckap4-201ENSMUST00000053871 Krtap13O88375 197 aa9.53□□□□□ -0.88
Ckap4-201ENSMUST00000053871 Spaca4Q80ZQ0 127 aa9.53□□□□□ -0.88
Ckap4-201ENSMUST00000053871 Krtap10-10A0A1W2P7T6 217 aa9.52□□□□□ -0.89
Ckap4-201ENSMUST00000053871 H2al1bA0A087WP11 105 aa9.51□□□□□ -0.89
Ckap4-201ENSMUST00000053871 H2al1kJ3QP08 105 aa9.51□□□□□ -0.89
Ckap4-201ENSMUST00000053871 H2al1eQ810S6 105 aa9.51□□□□□ -0.89
Ckap4-201ENSMUST00000053871 H2al1mQ9DAD9 105 aa9.51□□□□□ -0.89
Ckap4-201ENSMUST00000053871 Gpr15lA0A0B4J1N3 78 aa9.5□□□□□ -0.89
Ckap4-201ENSMUST00000053871 Defb13Q8R2I4 64 aa9.5□□□□□ -0.89
Ckap4-201ENSMUST00000053871 Gm16253D3Z167 63 aa9.5□□□□□ -0.89
Ckap4-201ENSMUST00000053871 Ccdc179J3QM76 67 aa9.49□□□□□ -0.89
Ckap4-201ENSMUST00000053871 Phxr4P15974 95 aa9.47□□□□□ -0.89
Ckap4-201ENSMUST00000053871 Stard9Q80TF6 4561 aa9.47□□□□□ -0.89
Ckap4-201ENSMUST00000053871 Tnp2P11378 117 aa9.46□□□□□ -0.89
Ckap4-201ENSMUST00000053871 Gm2696A0A1W2P709 240 aa9.42□□□□□ -0.9
Ckap4-201ENSMUST00000053871 Cypt15B1AXS0 87 aa9.39□□□□□ -0.91
Ckap4-201ENSMUST00000053871 Gm20661K7N787 53 aa9.39□□□□□ -0.91
Ckap4-201ENSMUST00000053871 Gm21798J3QNU5 87 aa9.36□□□□□ -0.91
Ckap4-201ENSMUST00000053871 Hectd4E9Q2E4 4418 aa9.34□□□□□ -0.91
Ckap4-201ENSMUST00000053871 Lrp1bQ9JI18 4599 aa9.33□□□□□ -0.92
Ckap4-201ENSMUST00000053871 SptssbQ925E8 76 aa9.33□□□□□ -0.92
Ckap4-201ENSMUST00000053871 Pkd1O08852 4293 aa9.32□□□□□ -0.92
Ckap4-201ENSMUST00000053871 Vps13dB1ART2 4390 aa9.32□□□□□ -0.92
Ckap4-201ENSMUST00000053871 Sec61gP60060 68 aa9.28□□□□□ -0.92
Ckap4-201ENSMUST00000053871 Gm10999F6Q4M4 69 aa9.28□□□□□ -0.92
Ckap4-201ENSMUST00000053871 4933415A04RikQ9D443 101 aa9.27□□□□□ -0.93
Ckap4-201ENSMUST00000053871 Dnah2P0C6F1 4456 aa9.22□□□□□ -0.93
Ckap4-201ENSMUST00000053871 Sox16Q62247 57 aa9.2□□□□□ -0.94
Ckap4-201ENSMUST00000053871 Defb1P56386 69 aa9.18□□□□□ -0.94
Ckap4-201ENSMUST00000053871 RetnlbQ99P86 105 aa9.18□□□□□ -0.94
Ckap4-201ENSMUST00000053871 Q8BGJ3 129 aa9.18□□□□□ -0.94
Ckap4-201ENSMUST00000053871 ApobE9Q414 4505 aa9.17□□□□□ -0.94
Ckap4-201ENSMUST00000053871 9230102O04RikA2ASX7 82 aa9.17□□□□□ -0.94
Ckap4-201ENSMUST00000053871 Ndufb1P0DN34 57 aa9.13□□□□□ -0.95
Ckap4-201ENSMUST00000053871 2310034C09RikQ9D746 214 aa9.09□□□□□ -0.95
Ckap4-201ENSMUST00000053871 Pkhd1E9PZ36 4059 aa9.09□□□□□ -0.95
Ckap4-201ENSMUST00000053871 Gm10643Q3URG9 111 aa9.06□□□□□ -0.96
Ckap4-201ENSMUST00000053871 Ryr3A2AGL3 4863 aa9.03□□□□□ -0.96
Ckap4-201ENSMUST00000053871 OxtP35454 125 aa9.02□□□□□ -0.97
Ckap4-201ENSMUST00000053871 Fat1A0A1L1SQU7 4645 aa9□□□□□ -0.97
Ckap4-201ENSMUST00000053871 Ndufs5Q99LY9 106 aa8.99□□□□□ -0.97
Ckap4-201ENSMUST00000053871 Gm3646F6S692 53 aa8.99□□□□□ -0.97
Ckap4-201ENSMUST00000053871 Uqcr11Q9CPX8 56 aa8.99□□□□□ -0.97
Ckap4-201ENSMUST00000053871 Limd2Q8BGB5 128 aa8.97□□□□□ -0.97
Ckap4-201ENSMUST00000053871 Dync1h1Q9JHU4 4644 aaKnown RBP8.9□□□□□ -0.98
Ckap4-201ENSMUST00000053871 2310079G19RikQ9D6L6 185 aa8.9□□□□□ -0.99
Ckap4-201ENSMUST00000053871 Fat2Q5F226 4351 aa8.89□□□□□ -0.99
Ckap4-201ENSMUST00000053871 Gm26620Q9CY65 116 aa8.89□□□□□ -0.99
Ckap4-201ENSMUST00000053871 Gm4491E0CX42 125 aa8.88□□□□□ -0.99
Ckap4-201ENSMUST00000053871 Krtap3-2Q9D638 99 aa8.88□□□□□ -0.99
Ckap4-201ENSMUST00000053871 Krtap3-3Q9D7P0 99 aa8.88□□□□□ -0.99
Ckap4-201ENSMUST00000053871 Lrp1Q91ZX7 4545 aaKnown RBP8.87□□□□□ -0.99
Ckap4-201ENSMUST00000053871 SacsQ9JLC8 4582 aa8.85□□□□□ -0.99
Ckap4-201ENSMUST00000053871 4930507D05RikQ8C9C9 103 aa8.84□□□□□ -0.99
Ckap4-201ENSMUST00000053871 1700042G07RikB1AUF7 90 aa8.84□□□□□ -0.99
Ckap4-201ENSMUST00000053871 Vps13bQ80TY5 3993 aa8.83□□□□□ -1
Ckap4-201ENSMUST00000053871 Gm11939A2A592 99 aa8.77□□□□□ -1.01
Ckap4-201ENSMUST00000053871 D6Ertd527eA0A0N4SWI3 464 aa8.76□□□□□ -1.01
Ckap4-201ENSMUST00000053871 A930033H14RikG5E8X6 103 aa8.74□□□□□ -1.01
Ckap4-201ENSMUST00000053871 Pkhd1l1Q80ZA4 4249 aa8.73□□□□□ -1.01
Ckap4-201ENSMUST00000053871 Gm9736A0A1W2P7N1 277 aa8.66□□□□□ -1.02
Ckap4-201ENSMUST00000053871 Rps29P62274 56 aa8.63□□□□□ -1.03
Ckap4-201ENSMUST00000053871 Mycbp2Q7TPH6 4711 aa8.57□□□□□ -1.04
Ckap4-201ENSMUST00000053871 Kmt2cQ8BRH4 4903 aa8.56□□□□□ -1.04
Ckap4-201ENSMUST00000053871 Gm5767A0A0J9YTU8 78 aa8.55□□□□□ -1.04
Ckap4-201ENSMUST00000053871 Gm9821Q8K076 103 aa8.52□□□□□ -1.04
Ckap4-201ENSMUST00000053871 Krtap19-5O08632 62 aa8.52□□□□□ -1.05
Ckap4-201ENSMUST00000053871 Krtap15-1Q9QZU5 150 aa8.52□□□□□ -1.05
Ckap4-201ENSMUST00000053871 Gm5965D3Z724 196 aa8.51□□□□□ -1.05
Ckap4-201ENSMUST00000053871 Abca13Q5SSE9 5034 aa8.5□□□□□ -1.05
Ckap4-201ENSMUST00000053871 Ryr2E9Q401 4966 aaKnown RBP8.49□□□□□ -1.05
Ckap4-201ENSMUST00000053871 Fat3Q8BNA6 4555 aa8.49□□□□□ -1.05
Ckap4-201ENSMUST00000053871 Cox6b2Q80ZN9 88 aa8.48□□□□□ -1.05
Ckap4-201ENSMUST00000053871 Gm3880A0A1B0GSB3 72 aa8.45□□□□□ -1.06
Ckap4-201ENSMUST00000053871 Gm20537G3UYK7 97 aa8.41□□□□□ -1.06
Ckap4-201ENSMUST00000053871 Rnase13Q5GAM7 153 aa8.41□□□□□ -1.06
Ckap4-201ENSMUST00000053871 Gm10382Q3V0T5 144 aa8.35□□□□□ -1.07
Ckap4-201ENSMUST00000053871 Ryr1E9PZQ0 5035 aa8.33□□□□□ -1.08
Ckap4-201ENSMUST00000053871 Gm17606F6ZL36 78 aa8.32□□□□□ -1.08
Ckap4-201ENSMUST00000053871 Rpl37Q9D823 97 aa8.26□□□□□ -1.09
Ckap4-201ENSMUST00000053871 Pla2g10Q9QXX3 151 aa8.25□□□□□ -1.09
Ckap4-201ENSMUST00000053871 Dnah8Q91XQ0 4731 aa8.23□□□□□ -1.09
Ckap4-201ENSMUST00000053871 CriptO70333 101 aa8.23□□□□□ -1.09
Ckap4-201ENSMUST00000053871 Gm9955Q8CEJ8 102 aa8.19□□□□□ -1.1
Ckap4-201ENSMUST00000053871 Kiaa1109A2AAE1 5005 aa8.17□□□□□ -1.1
Ckap4-201ENSMUST00000053871 HydinQ80W93 5154 aa8.16□□□□□ -1.1
Ckap4-201ENSMUST00000053871 Gm12216A0A1W2P827 62 aa8.15□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 45.2 ms