RNA–Protein interactions for RNA: ENSMUST00000016399.5

Tubb1-201, Transcript of Tubulin beta-1 chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tubb1, Length 1,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1-201ENSMUST00000016399 Krtap1-3A2A588 173 aa6.25□□□□□ -1.41
Tubb1-201ENSMUST00000016399 Tmem213Q08EA8 116 aa6.25□□□□□ -1.41
Tubb1-201ENSMUST00000016399 Ormdl1Q921I0 153 aa6.25□□□□□ -1.41
Tubb1-201ENSMUST00000016399 Rps29P62274 56 aa6.25□□□□□ -1.41
Tubb1-201ENSMUST00000016399 Dph3Q8K0W9 82 aa6.25□□□□□ -1.41
Tubb1-201ENSMUST00000016399 Gm10308Q9CVR5 141 aa6.25□□□□□ -1.41
Tubb1-201ENSMUST00000016399 ZanO88799 5376 aa6.24□□□□□ -1.41
Tubb1-201ENSMUST00000016399 Igkv8-28A0A0G2JE47 121 aa6.24□□□□□ -1.41
Tubb1-201ENSMUST00000016399 Igkv3-4A0A140T8Q4 119 aa6.23□□□□□ -1.41
Tubb1-201ENSMUST00000016399 Gm16253D3Z167 63 aa6.23□□□□□ -1.41
Tubb1-201ENSMUST00000016399 Sprr2jO70561 109 aa6.23□□□□□ -1.41
Tubb1-201ENSMUST00000016399 Gm21886J3QJU9 214 aa6.22□□□□□ -1.41
Tubb1-201ENSMUST00000016399 Igkv8-21A0A140T8P7 120 aa6.21□□□□□ -1.42
Tubb1-201ENSMUST00000016399 4930535I16RikQ9CUI2 172 aa6.21□□□□□ -1.42
Tubb1-201ENSMUST00000016399 Atp5eP56382 52 aa6.2□□□□□ -1.42
Tubb1-201ENSMUST00000016399 Gm2310J3QNJ2 377 aa6.19□□□□□ -1.42
Tubb1-201ENSMUST00000016399 Gm5965D3Z724 196 aa6.18□□□□□ -1.42
Tubb1-201ENSMUST00000016399 Tmem254aP0DN89 123 aa6.17□□□□□ -1.42
Tubb1-201ENSMUST00000016399 Tmem254bP0DN90 123 aa6.17□□□□□ -1.42
Tubb1-201ENSMUST00000016399 Tmem254cP0DN91 123 aa6.17□□□□□ -1.42
Tubb1-201ENSMUST00000016399 Ubl5Q9EPV8 73 aa6.17□□□□□ -1.42
Tubb1-201ENSMUST00000016399 LorP18165 486 aa6.15□□□□□ -1.43
Tubb1-201ENSMUST00000016399 Crct1Q6PAI5 102 aa6.14□□□□□ -1.43
Tubb1-201ENSMUST00000016399 Gm37013Q8K491 104 aa6.14□□□□□ -1.43
Tubb1-201ENSMUST00000016399 Anapc13Q8R034 74 aa6.14□□□□□ -1.43
Tubb1-201ENSMUST00000016399 Gm20604F8WIA3 75 aa6.13□□□□□ -1.43
Tubb1-201ENSMUST00000016399 Cystm1Q8K353 104 aa6.13□□□□□ -1.43
Tubb1-201ENSMUST00000016399 Gm44790A0A0N4SV91 103 aa6.12□□□□□ -1.43
Tubb1-201ENSMUST00000016399 UqcrqQ9CQ69 82 aa6.11□□□□□ -1.43
Tubb1-201ENSMUST00000016399 MplkipQ9D011 178 aa6.11□□□□□ -1.43
Tubb1-201ENSMUST00000016399 Hist1h4aP62806 103 aaKnown RBP6.1□□□□□ -1.43
Tubb1-201ENSMUST00000016399 Gm11569B1AQB1 180 aa6.09□□□□□ -1.43
Tubb1-201ENSMUST00000016399 Mrpl34Q99N91 92 aa6.09□□□□□ -1.43
Tubb1-201ENSMUST00000016399 Lce1gQ9D195 139 aa6.09□□□□□ -1.43
Tubb1-201ENSMUST00000016399 C130032M10RikQ8C888 123 aa6.08□□□□□ -1.44
Tubb1-201ENSMUST00000016399 2310057N15RikQ9D6T8 200 aa6.08□□□□□ -1.44
Tubb1-201ENSMUST00000016399 Gm10061D3Z714 54 aa6.07□□□□□ -1.44
Tubb1-201ENSMUST00000016399 Gm5767A0A0J9YTU8 78 aa6.05□□□□□ -1.44
Tubb1-201ENSMUST00000016399 Cypt15B1AXS0 87 aa6.04□□□□□ -1.44
Tubb1-201ENSMUST00000016399 Syne2Q6ZWQ0 6874 aaKnown RBP6.04□□□□□ -1.44
Tubb1-201ENSMUST00000016399 Gm11939A2A592 99 aa6.03□□□□□ -1.44
Tubb1-201ENSMUST00000016399 Rnf213E9Q555 5152 aaKnown RBP6.02□□□□□ -1.44
Tubb1-201ENSMUST00000016399 Ndufc1Q9CQY9 76 aa5.99□□□□□ -1.45
Tubb1-201ENSMUST00000016399 Igkv8-19A0A0G2JFN8 121 aa5.99□□□□□ -1.45
Tubb1-201ENSMUST00000016399 7530416G11RikJ3QJX6 159 aa5.99□□□□□ -1.45
Tubb1-201ENSMUST00000016399 Reg3aO09037 175 aa5.99□□□□□ -1.45
Tubb1-201ENSMUST00000016399 Defa21Q8C1P2 93 aa5.98□□□□□ -1.45
Tubb1-201ENSMUST00000016399 Gm26620Q9CY65 116 aa5.98□□□□□ -1.45
Tubb1-201ENSMUST00000016399 Fam229bQ8CF36 80 aa5.97□□□□□ -1.45
Tubb1-201ENSMUST00000016399 Igkv3-3A0A140T8Q0 119 aa5.94□□□□□ -1.46
Tubb1-201ENSMUST00000016399 4930518I15RikQ3V2W7 57 aa5.94□□□□□ -1.46
Tubb1-201ENSMUST00000016399 Serp2Q6TAW2 65 aa5.94□□□□□ -1.46
Tubb1-201ENSMUST00000016399 Gm9821Q8K076 103 aa5.94□□□□□ -1.46
Tubb1-201ENSMUST00000016399 Prr15lQ8JZM2 100 aa5.93□□□□□ -1.46
Tubb1-201ENSMUST00000016399 Prr13Q9CQJ5 137 aa5.93□□□□□ -1.46
Tubb1-201ENSMUST00000016399 Apoc4Q61268 124 aa5.91□□□□□ -1.46
Tubb1-201ENSMUST00000016399 Naa38Q9D2U5 125 aa5.9□□□□□ -1.47
Tubb1-201ENSMUST00000016399 BikO70337 150 aa5.89□□□□□ -1.47
Tubb1-201ENSMUST00000016399 Krtap15-1Q9QZU5 150 aa5.87□□□□□ -1.47
Tubb1-201ENSMUST00000016399 Defb13Q8R2I4 64 aa5.86□□□□□ -1.47
Tubb1-201ENSMUST00000016399 Gm10318A0A1W2P728 225 aa5.85□□□□□ -1.47
Tubb1-201ENSMUST00000016399 Gm11596B1AQB0 205 aa5.84□□□□□ -1.47
Tubb1-201ENSMUST00000016399 Spink8Q09TK9 105 aa5.84□□□□□ -1.47
Tubb1-201ENSMUST00000016399 Sec61bQ9CQS8 96 aaKnown RBP5.84□□□□□ -1.47
Tubb1-201ENSMUST00000016399 Scgb1b2O35176 93 aa5.83□□□□□ -1.48
Tubb1-201ENSMUST00000016399 Rpl37Q9D823 97 aa5.83□□□□□ -1.48
Tubb1-201ENSMUST00000016399 A0A286YE49 62 aa5.82□□□□□ -1.48
Tubb1-201ENSMUST00000016399 Samd13D3YUG0 102 aa5.82□□□□□ -1.48
Tubb1-201ENSMUST00000016399 Gm10267M0QWD8 85 aa5.82□□□□□ -1.48
Tubb1-201ENSMUST00000016399 B230307C23RikQ8BLB2 64 aa5.8□□□□□ -1.48
Tubb1-201ENSMUST00000016399 Gm28539A0A087WSL9 92 aa5.79□□□□□ -1.48
Tubb1-201ENSMUST00000016399 SmcpP15265 143 aa5.78□□□□□ -1.48
Tubb1-201ENSMUST00000016399 Krtap3-2Q9D638 99 aa5.75□□□□□ -1.49
Tubb1-201ENSMUST00000016399 Krtap3-3Q9D7P0 99 aa5.75□□□□□ -1.49
Tubb1-201ENSMUST00000016399 Gm11555B1AQ89 175 aa5.74□□□□□ -1.49
Tubb1-201ENSMUST00000016399 1700042G07RikB1AUF7 90 aa5.74□□□□□ -1.49
Tubb1-201ENSMUST00000016399 SspoQ8CG65 4998 aa5.74□□□□□ -1.49
Tubb1-201ENSMUST00000016399 Lce1jD3YUU5 139 aa5.74□□□□□ -1.49
Tubb1-201ENSMUST00000016399 1700074P13RikQ9D9G7 251 aa5.74□□□□□ -1.49
Tubb1-201ENSMUST00000016399 Tmem258P61166 79 aa5.73□□□□□ -1.49
Tubb1-201ENSMUST00000016399 Coa6Q8BGD8 79 aa5.72□□□□□ -1.49
Tubb1-201ENSMUST00000016399 Krtap19-3Q925H6 87 aa5.72□□□□□ -1.49
Tubb1-201ENSMUST00000016399 Spint4Q9D263 159 aa5.71□□□□□ -1.5
Tubb1-201ENSMUST00000016399 Gm19935A0A1B0GSF9 52 aa5.7□□□□□ -1.5
Tubb1-201ENSMUST00000016399 Atox1O08997 68 aaKnown RBP5.7□□□□□ -1.5
Tubb1-201ENSMUST00000016399 2310034C09RikQ9D746 214 aa5.7□□□□□ -1.5
Tubb1-201ENSMUST00000016399 Rnase13Q5GAM7 153 aa5.69□□□□□ -1.5
Tubb1-201ENSMUST00000016399 Pcp4P63054 62 aa5.68□□□□□ -1.5
Tubb1-201ENSMUST00000016399 Krtap4-6Q3V4B7 195 aa5.67□□□□□ -1.5
Tubb1-201ENSMUST00000016399 Smlr1J3QMJ4 66 aa5.66□□□□□ -1.5
Tubb1-201ENSMUST00000016399 Krtap16-3Q8C1I6 86 aa5.66□□□□□ -1.5
Tubb1-201ENSMUST00000016399 Krtap19-1Q925H2 87 aa5.66□□□□□ -1.5
Tubb1-201ENSMUST00000016399 Muc5bE9Q5I3 4800 aa5.65□□□□□ -1.51
Tubb1-201ENSMUST00000016399 Smim20D3Z7Q2 69 aa5.64□□□□□ -1.51
Tubb1-201ENSMUST00000016399 Krtap1-4Q3V2D6 188 aa5.63□□□□□ -1.51
Tubb1-201ENSMUST00000016399 Gm4491E0CX42 125 aa5.62□□□□□ -1.51
Tubb1-201ENSMUST00000016399 Chtf8P0CG14 533 aa5.61□□□□□ -1.51
Tubb1-201ENSMUST00000016399 Rps28P62858 69 aaKnown RBP5.61□□□□□ -1.51
Tubb1-201ENSMUST00000016399 SnurfQ9WU12 71 aa5.6□□□□□ -1.51
Tubb1-201ENSMUST00000016399 Pet100P0DJE0 76 aa5.59□□□□□ -1.51
Retrieved 100 of 22,080 RNA–protein pairs in 143.3 ms