RNA–Protein interactions for RNA: ENSMUST00000016399.5

Tubb1-201, Transcript of Tubulin beta-1 chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tubb1, Length 1,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1-201ENSMUST00000016399 Gm35339A0A140LHH9 1649 aa24.64■■□□□ 1.54
Tubb1-201ENSMUST00000016399 NischQ80TM9 1593 aa24.24■■□□□ 1.47
Tubb1-201ENSMUST00000016399 Abcc9P70170 1546 aa23.99■■□□□ 1.43
Tubb1-201ENSMUST00000016399 Abcc8B2RUS7 1588 aa23.6■■□□□ 1.37
Tubb1-201ENSMUST00000016399 ScribQ80U72 1612 aa23.12■■□□□ 1.29
Tubb1-201ENSMUST00000016399 Dnajc5bQ9CQ94 199 aa22.33■■□□□ 1.17
Tubb1-201ENSMUST00000016399 NacadQ5SWP3 1504 aa22.33■■□□□ 1.17
Tubb1-201ENSMUST00000016399 Kdm5dQ62240 1548 aa22.25■■□□□ 1.15
Tubb1-201ENSMUST00000016399 Sycp2Q9CUU3 1500 aa21.93■■□□□ 1.1
Tubb1-201ENSMUST00000016399 BicraF8VPZ9 1578 aa21.72■■□□□ 1.07
Tubb1-201ENSMUST00000016399 Dcaf1Q80TR8 1506 aa21.48■■□□□ 1.03
Tubb1-201ENSMUST00000016399 Thoc2B1AZI6 1594 aaKnown RBP21.29■■□□□ 1
Tubb1-201ENSMUST00000016399 Pds5bQ4VA53 1446 aaKnown RBP21.29■■□□□ 1
Tubb1-201ENSMUST00000016399 Rb1cc1Q9ESK9 1588 aa21.07■□□□□ 0.96
Tubb1-201ENSMUST00000016399 Cc2d2aQ8CFW7 1633 aa20.99■□□□□ 0.95
Tubb1-201ENSMUST00000016399 Atad2bE9Q166 1460 aaKnown RBP20.94■□□□□ 0.94
Tubb1-201ENSMUST00000016399 Ercc6F8VPZ5 1481 aa20.86■□□□□ 0.93
Tubb1-201ENSMUST00000016399 Dnajc5P60904 198 aa20.78■□□□□ 0.92
Tubb1-201ENSMUST00000016399 Rhox8Q6VSS7 320 aa20.77■□□□□ 0.91
Tubb1-201ENSMUST00000016399 Baz1aO88379 1555 aa20.69■□□□□ 0.9
Tubb1-201ENSMUST00000016399 Zcchc6Q5BLK4 1491 aaKnown RBP20.68■□□□□ 0.9
Tubb1-201ENSMUST00000016399 Fam135aQ6NS59 1506 aa20.68■□□□□ 0.9
Tubb1-201ENSMUST00000016399 Trim41Q5NCC3 630 aa20.62■□□□□ 0.89
Tubb1-201ENSMUST00000016399 Smarca2Q6DIC0 1577 aa20.62■□□□□ 0.89
Tubb1-201ENSMUST00000016399 Crybg2B7ZCC2 1516 aa20.6■□□□□ 0.89
Tubb1-201ENSMUST00000016399 Iqgap2Q3UQ44 1575 aa20.5■□□□□ 0.87
Tubb1-201ENSMUST00000016399 Smarca4Q3TKT4 1613 aaKnown RBP20.49■□□□□ 0.87
Tubb1-201ENSMUST00000016399 Phldb1Q6PDH0 1371 aaKnown RBP20.48■□□□□ 0.87
Tubb1-201ENSMUST00000016399 Ccdc180J3QNE4 1664 aa20.47■□□□□ 0.87
Tubb1-201ENSMUST00000016399 Ubl4bQ9CQ84 188 aa20.45■□□□□ 0.86
Tubb1-201ENSMUST00000016399 Frmpd1A2AKB4 1549 aa20.42■□□□□ 0.86
Tubb1-201ENSMUST00000016399 Wdr62Q3U3T8 1523 aa20.41■□□□□ 0.86
Tubb1-201ENSMUST00000016399 Cecr2E9Q2Z1 1453 aa20.35■□□□□ 0.85
Tubb1-201ENSMUST00000016399 Baz1bQ9Z277 1479 aa20.28■□□□□ 0.84
Tubb1-201ENSMUST00000016399 Mrc2Q64449 1479 aa20.26■□□□□ 0.83
Tubb1-201ENSMUST00000016399 Unc13aQ4KUS2 1712 aa19.97■□□□□ 0.79
Tubb1-201ENSMUST00000016399 Lrriq1Q0P5X1 1673 aa19.83■□□□□ 0.77
Tubb1-201ENSMUST00000016399 Rsf1E9PWW9 1441 aaKnown RBP19.8■□□□□ 0.76
Tubb1-201ENSMUST00000016399 CftrP26361 1476 aa19.7■□□□□ 0.74
Tubb1-201ENSMUST00000016399 Rtl1Q7M732 1744 aa19.69■□□□□ 0.74
Tubb1-201ENSMUST00000016399 Cux2P70298 1426 aa19.68■□□□□ 0.74
Tubb1-201ENSMUST00000016399 Shroom2A2ALU4 1481 aa19.67■□□□□ 0.74
Tubb1-201ENSMUST00000016399 Cttnbp2B9EJA2 1648 aa19.61■□□□□ 0.73
Tubb1-201ENSMUST00000016399 Synj1Q8CHC4 1574 aa19.61■□□□□ 0.73
Tubb1-201ENSMUST00000016399 Col17a1Q07563 1470 aa19.59■□□□□ 0.73
Tubb1-201ENSMUST00000016399 Kif21aQ9QXL2 1672 aa19.59■□□□□ 0.73
Tubb1-201ENSMUST00000016399 Kif15Q6P9L6 1387 aa19.58■□□□□ 0.73
Tubb1-201ENSMUST00000016399 Esf1Q3V1V3 845 aaKnown RBP19.52■□□□□ 0.72
Tubb1-201ENSMUST00000016399 Eif4g3Q80XI3 1579 aaKnown RBP19.52■□□□□ 0.72
Tubb1-201ENSMUST00000016399 Pabpn1Q8CCS6 302 aaKnown RBP19.51■□□□□ 0.71
Tubb1-201ENSMUST00000016399 Npm1Q61937 292 aaKnown RBP19.5■□□□□ 0.71
Tubb1-201ENSMUST00000016399 Brd4Q9ESU6 1400 aaKnown RBP19.46■□□□□ 0.71
Tubb1-201ENSMUST00000016399 Pelp1Q9DBD5 1123 aaKnown RBP19.44■□□□□ 0.7
Tubb1-201ENSMUST00000016399 Ccdc136Q3TVA9 1136 aa19.39■□□□□ 0.69
Tubb1-201ENSMUST00000016399 Top2bQ64511 1612 aa19.35■□□□□ 0.69
Tubb1-201ENSMUST00000016399 Urb2E9Q7L1 1524 aaKnown RBP19.34■□□□□ 0.69
Tubb1-201ENSMUST00000016399 Cep164Q5DU05 1446 aa19.29■□□□□ 0.68
Tubb1-201ENSMUST00000016399 Plb1Q3TTY0 1478 aa19.29■□□□□ 0.68
Tubb1-201ENSMUST00000016399 Il27Q8K3I6 234 aa19.25■□□□□ 0.67
Tubb1-201ENSMUST00000016399 Pcdh10E9PXQ7 1057 aa19.25■□□□□ 0.67
Tubb1-201ENSMUST00000016399 Dhx29Q6PGC1 1365 aaKnown RBP19.22■□□□□ 0.67
Tubb1-201ENSMUST00000016399 Lamc3Q9R0B6 1581 aa19.21■□□□□ 0.67
Tubb1-201ENSMUST00000016399 Zcchc11B2RX14 1644 aaKnown RBP19.11■□□□□ 0.65
Tubb1-201ENSMUST00000016399 Ttbk1Q6PCN3 1308 aa19.1■□□□□ 0.65
Tubb1-201ENSMUST00000016399 Rusc2Q80U22 1514 aa19.05■□□□□ 0.64
Tubb1-201ENSMUST00000016399 LrpprcQ6PB66 1392 aaKnown RBP19.04■□□□□ 0.64
Tubb1-201ENSMUST00000016399 Crocc2F6XLV1 1638 aa19.02■□□□□ 0.64
Tubb1-201ENSMUST00000016399 Ccdc18Q640L5 1455 aa19.02■□□□□ 0.64
Tubb1-201ENSMUST00000016399 Ift140E9PY46 1464 aa19■□□□□ 0.63
Tubb1-201ENSMUST00000016399 Arhgef5E9Q7D5 1581 aa18.96■□□□□ 0.63
Tubb1-201ENSMUST00000016399 Adgrl3Q80TS3 1537 aa18.94■□□□□ 0.62
Tubb1-201ENSMUST00000016399 PogzQ8BZH4 1409 aaKnown RBP18.85■□□□□ 0.61
Tubb1-201ENSMUST00000016399 PtprkP35822 1457 aa18.84■□□□□ 0.61
Tubb1-201ENSMUST00000016399 Gm156Q58A37 223 aa18.83■□□□□ 0.61
Tubb1-201ENSMUST00000016399 Camsap1A2AHC3 1581 aa18.82■□□□□ 0.6
Tubb1-201ENSMUST00000016399 Disp1Q3TDN0 1521 aa18.8■□□□□ 0.6
Tubb1-201ENSMUST00000016399 PtprtQ99M80 1454 aa18.79■□□□□ 0.6
Tubb1-201ENSMUST00000016399 Golga3P55937 1487 aa18.78■□□□□ 0.6
Tubb1-201ENSMUST00000016399 TnnQ80Z71 1560 aa18.77■□□□□ 0.59
Tubb1-201ENSMUST00000016399 Duox2A2AQ99 1517 aa18.76■□□□□ 0.59
Tubb1-201ENSMUST00000016399 Cep170Q6A065 1588 aa18.76■□□□□ 0.59
Tubb1-201ENSMUST00000016399 Gapvd1Q6PAR5 1458 aa18.76■□□□□ 0.59
Tubb1-201ENSMUST00000016399 Cngb1E1AZ71 1325 aa18.73■□□□□ 0.59
Tubb1-201ENSMUST00000016399 Cc2d2bA0A286YDU8 1405 aa18.71■□□□□ 0.59
Tubb1-201ENSMUST00000016399 Nup160Q9Z0W3 1402 aaKnown RBP18.68■□□□□ 0.58
Tubb1-201ENSMUST00000016399 Fgd6Q69ZL1 1399 aa18.67■□□□□ 0.58
Tubb1-201ENSMUST00000016399 AknaQ80VW7 1404 aa18.61■□□□□ 0.57
Tubb1-201ENSMUST00000016399 Plekhg3Q4VAC9 1341 aa18.58■□□□□ 0.56
Tubb1-201ENSMUST00000016399 Samd9lQ69Z37 1561 aa18.58■□□□□ 0.56
Tubb1-201ENSMUST00000016399 Rad54l2Q99NG0 1466 aa18.57■□□□□ 0.56
Tubb1-201ENSMUST00000016399 AqrQ8CFQ3 1481 aaKnown RBP18.55■□□□□ 0.56
Tubb1-201ENSMUST00000016399 Ythdc2B2RR83 1445 aaKnown RBP18.55■□□□□ 0.56
Tubb1-201ENSMUST00000016399 Pprc1Q6NZN1 1644 aa18.55■□□□□ 0.56
Tubb1-201ENSMUST00000016399 Grin2bQ01097 1482 aa18.55■□□□□ 0.56
Tubb1-201ENSMUST00000016399 Ppp1r18Q8BQ30 594 aa18.54■□□□□ 0.56
Tubb1-201ENSMUST00000016399 Pbrm1Q8BSQ9 1634 aaKnown RBP18.53■□□□□ 0.56
Tubb1-201ENSMUST00000016399 Abcc1O35379 1528 aa18.51■□□□□ 0.55
Tubb1-201ENSMUST00000016399 Fmn1Q05860 1466 aa18.51■□□□□ 0.55
Tubb1-201ENSMUST00000016399 Rapgef2Q8CHG7 1496 aa18.51■□□□□ 0.55
Tubb1-201ENSMUST00000016399 Grin2aP35436 1464 aa18.49■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 275.9 ms