RNA–Protein interactions for RNA: ENSMUST00000008004.9

Ddx49-201, Transcript of Probable ATP-dependent RNA helicase DDX49, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx49, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49-201ENSMUST00000008004 Adm2Q7TNK8 150 aa9.56□□□□□ -0.88
Ddx49-201ENSMUST00000008004 Gm17521F6QAC8 156 aa9.55□□□□□ -0.88
Ddx49-201ENSMUST00000008004 5730596B20RikQ8BQ08 205 aa9.55□□□□□ -0.88
Ddx49-201ENSMUST00000008004 A330070K13RikQ8CA53 115 aa9.55□□□□□ -0.88
Ddx49-201ENSMUST00000008004 NbdyA0A0N4SUI7 68 aa9.54□□□□□ -0.88
Ddx49-201ENSMUST00000008004 Gm10767Q3TQP0 103 aa9.53□□□□□ -0.88
Ddx49-201ENSMUST00000008004 Lrp1bQ9JI18 4599 aa9.53□□□□□ -0.88
Ddx49-201ENSMUST00000008004 Ryr1E9PZQ0 5035 aa9.53□□□□□ -0.88
Ddx49-201ENSMUST00000008004 Tmem243B2RVB9 118 aa9.52□□□□□ -0.89
Ddx49-201ENSMUST00000008004 A930002H24RikQ8C8Y3 163 aa9.52□□□□□ -0.89
Ddx49-201ENSMUST00000008004 SacsQ9JLC8 4582 aa9.52□□□□□ -0.89
Ddx49-201ENSMUST00000008004 Gm10642Q3TWM1 71 aa9.51□□□□□ -0.89
Ddx49-201ENSMUST00000008004 Ifitm6A0A1B0GS75 124 aa9.5□□□□□ -0.89
Ddx49-201ENSMUST00000008004 A0A286YE02 88 aa9.5□□□□□ -0.89
Ddx49-201ENSMUST00000008004 Gm7102J3QQ10 178 aa9.5□□□□□ -0.89
Ddx49-201ENSMUST00000008004 Krtap14O08640 167 aa9.5□□□□□ -0.89
Ddx49-201ENSMUST00000008004 9530003J23RikQ8BM26 151 aa9.48□□□□□ -0.89
Ddx49-201ENSMUST00000008004 Tnp2P11378 117 aa9.47□□□□□ -0.89
Ddx49-201ENSMUST00000008004 Gm10139O88245 57 aa9.46□□□□□ -0.89
Ddx49-201ENSMUST00000008004 AI606181Q8C7B9 129 aa9.46□□□□□ -0.89
Ddx49-201ENSMUST00000008004 Ube2aQ9Z255 152 aa9.46□□□□□ -0.89
Ddx49-201ENSMUST00000008004 Defa28D3Z1V9 94 aa9.46□□□□□ -0.9
Ddx49-201ENSMUST00000008004 D130052B06RikQ3UW13 202 aa9.46□□□□□ -0.9
Ddx49-201ENSMUST00000008004 Igkv8-26A0A075B5N5 123 aa9.45□□□□□ -0.9
Ddx49-201ENSMUST00000008004 Lamtor3O88653 124 aa9.44□□□□□ -0.9
Ddx49-201ENSMUST00000008004 Gm27235Q3UW50 83 aa9.44□□□□□ -0.9
Ddx49-201ENSMUST00000008004 Wfdc13Q5DQQ6 81 aa9.44□□□□□ -0.9
Ddx49-201ENSMUST00000008004 Vpreb3D3Z6J4 130 aa9.43□□□□□ -0.9
Ddx49-201ENSMUST00000008004 Ighv10-3A0A075B5T6 119 aa9.43□□□□□ -0.9
Ddx49-201ENSMUST00000008004 Vpreb1P13372 142 aa9.43□□□□□ -0.9
Ddx49-201ENSMUST00000008004 Igkv1-110A0A0B4J1I0 119 aa9.42□□□□□ -0.9
Ddx49-201ENSMUST00000008004 Igkv8-27A0A0G2JF28 120 aa9.41□□□□□ -0.9
Ddx49-201ENSMUST00000008004 Igkv8-30A0A140T8M3 121 aa9.41□□□□□ -0.9
Ddx49-201ENSMUST00000008004 Q8K1L6 76 aa9.41□□□□□ -0.9
Ddx49-201ENSMUST00000008004 Vps13bQ80TY5 3993 aa9.4□□□□□ -0.9
Ddx49-201ENSMUST00000008004 Vpreb2P13373 142 aa9.4□□□□□ -0.9
Ddx49-201ENSMUST00000008004 Kmt2cQ8BRH4 4903 aa9.4□□□□□ -0.9
Ddx49-201ENSMUST00000008004 A830005F24RikQ8BRT5 167 aa9.4□□□□□ -0.91
Ddx49-201ENSMUST00000008004 Igkv3-7A0A0G2JE31 119 aa9.38□□□□□ -0.91
Ddx49-201ENSMUST00000008004 A730071L15RikQ8C4X0 137 aa9.37□□□□□ -0.91
Ddx49-201ENSMUST00000008004 Fat2Q5F226 4351 aa9.36□□□□□ -0.91
Ddx49-201ENSMUST00000008004 Gm37389A0A0A6YW05 95 aa9.36□□□□□ -0.91
Ddx49-201ENSMUST00000008004 P06320 134 aa9.36□□□□□ -0.91
Ddx49-201ENSMUST00000008004 Gm10401E9Q3K6 71 aa9.35□□□□□ -0.91
Ddx49-201ENSMUST00000008004 Smlr1J3QMJ4 66 aa9.35□□□□□ -0.91
Ddx49-201ENSMUST00000008004 Odf3bQ5M8M2 238 aa9.35□□□□□ -0.91
Ddx49-201ENSMUST00000008004 Fam19a3Q7TPG6 132 aa9.35□□□□□ -0.91
Ddx49-201ENSMUST00000008004 Gm20726G3UX18 150 aa9.34□□□□□ -0.91
Ddx49-201ENSMUST00000008004 Xcl1P47993 114 aa9.34□□□□□ -0.91
Ddx49-201ENSMUST00000008004 ScxQ64124 207 aa9.34□□□□□ -0.91
Ddx49-201ENSMUST00000008004 Trav14d-3-dv8A0A075B619 120 aa9.33□□□□□ -0.92
Ddx49-201ENSMUST00000008004 Cox6a2P43023 97 aa9.33□□□□□ -0.92
Ddx49-201ENSMUST00000008004 Igkv3-5A0A140T8M6 119 aa9.32□□□□□ -0.92
Ddx49-201ENSMUST00000008004 Defb39Q70KL3 74 aa9.32□□□□□ -0.92
Ddx49-201ENSMUST00000008004 Igkv8-28A0A0G2JE47 121 aa9.31□□□□□ -0.92
Ddx49-201ENSMUST00000008004 Gm10308Q9CVR5 141 aa9.31□□□□□ -0.92
Ddx49-201ENSMUST00000008004 Anapc11Q9CPX9 84 aa9.31□□□□□ -0.92
Ddx49-201ENSMUST00000008004 Pkhd1l1Q80ZA4 4249 aa9.3□□□□□ -0.92
Ddx49-201ENSMUST00000008004 Sfta2E9PXB6 77 aa9.3□□□□□ -0.92
Ddx49-201ENSMUST00000008004 Rbm3O89086 153 aaKnown RBP9.29□□□□□ -0.92
Ddx49-201ENSMUST00000008004 Apoc4Q61268 124 aa9.29□□□□□ -0.92
Ddx49-201ENSMUST00000008004 Ccdc179J3QM76 67 aa9.27□□□□□ -0.93
Ddx49-201ENSMUST00000008004 1700018G05RikA0A1B0GSI2 66 aa9.26□□□□□ -0.93
Ddx49-201ENSMUST00000008004 Q8BT88 171 aa9.26□□□□□ -0.93
Ddx49-201ENSMUST00000008004 Dnah8Q91XQ0 4731 aa9.24□□□□□ -0.93
Ddx49-201ENSMUST00000008004 4930535I16RikQ9CUI2 172 aa9.24□□□□□ -0.93
Ddx49-201ENSMUST00000008004 Rps28P62858 69 aaKnown RBP9.23□□□□□ -0.93
Ddx49-201ENSMUST00000008004 Bean1Q9EQG5 255 aa9.23□□□□□ -0.93
Ddx49-201ENSMUST00000008004 Sprr2jO70561 109 aa9.22□□□□□ -0.93
Ddx49-201ENSMUST00000008004 Rpl37aP61514 92 aa9.22□□□□□ -0.93
Ddx49-201ENSMUST00000008004 Lrp1Q91ZX7 4545 aaKnown RBP9.22□□□□□ -0.93
Ddx49-201ENSMUST00000008004 Defa25Q5G864 92 aa9.22□□□□□ -0.93
Ddx49-201ENSMUST00000008004 RetnlbQ99P86 105 aa9.22□□□□□ -0.93
Ddx49-201ENSMUST00000008004 Znf706Q9D115 76 aaKnown RBP9.22□□□□□ -0.93
Ddx49-201ENSMUST00000008004 Pde6gP09174 87 aa9.21□□□□□ -0.94
Ddx49-201ENSMUST00000008004 Ormdl1Q921I0 153 aa9.21□□□□□ -0.94
Ddx49-201ENSMUST00000008004 Cypt14J3QPF7 87 aa9.18□□□□□ -0.94
Ddx49-201ENSMUST00000008004 Igkv8-21A0A140T8P7 120 aa9.17□□□□□ -0.94
Ddx49-201ENSMUST00000008004 Chchd10Q7TNL9 138 aa9.17□□□□□ -0.94
Ddx49-201ENSMUST00000008004 Gm12353A2AGJ4 60 aa9.16□□□□□ -0.94
Ddx49-201ENSMUST00000008004 Gm28230A0A0A0MQ91 144 aa9.16□□□□□ -0.94
Ddx49-201ENSMUST00000008004 Inafm2A0A1L1STD6 152 aa9.16□□□□□ -0.94
Ddx49-201ENSMUST00000008004 Mrpl55Q9CZ83 127 aa9.16□□□□□ -0.94
Ddx49-201ENSMUST00000008004 Hist1h4aP62806 103 aaKnown RBP9.15□□□□□ -0.94
Ddx49-201ENSMUST00000008004 Igf1P05017 153 aa9.14□□□□□ -0.95
Ddx49-201ENSMUST00000008004 Fat3Q8BNA6 4555 aa9.14□□□□□ -0.95
Ddx49-201ENSMUST00000008004 Abca13Q5SSE9 5034 aa9.14□□□□□ -0.95
Ddx49-201ENSMUST00000008004 Gm44790A0A0N4SV91 103 aa9.13□□□□□ -0.95
Ddx49-201ENSMUST00000008004 H2al1aQ5M8Q2 105 aa9.13□□□□□ -0.95
Ddx49-201ENSMUST00000008004 Igkv3-4A0A140T8Q4 119 aa9.12□□□□□ -0.95
Ddx49-201ENSMUST00000008004 MplkipQ9D011 178 aa9.11□□□□□ -0.95
Ddx49-201ENSMUST00000008004 Samd13D3YUG0 102 aa9.1□□□□□ -0.95
Ddx49-201ENSMUST00000008004 C130032M10RikQ8C888 123 aa9.1□□□□□ -0.95
Ddx49-201ENSMUST00000008004 Krtap19-5O08632 62 aa9.09□□□□□ -0.95
Ddx49-201ENSMUST00000008004 Mrpl34Q99N91 92 aa9.09□□□□□ -0.95
Ddx49-201ENSMUST00000008004 Herc2Q4U2R1 4836 aa9.09□□□□□ -0.95
Ddx49-201ENSMUST00000008004 Igkv3-10A0A0G2JGN0 119 aa9.08□□□□□ -0.96
Ddx49-201ENSMUST00000008004 Ubl5Q9EPV8 73 aa9.08□□□□□ -0.96
Ddx49-201ENSMUST00000008004 Gm17689B3GLJ4 109 aa9.07□□□□□ -0.96
Ddx49-201ENSMUST00000008004 Gm37013Q8K491 104 aa9.07□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 87.5 ms