RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Muc6Q80T03 2850 aa9.43□□□□□ -0.9
Ssr1-204ENSMUST00000225319 Inafm2A0A1L1STD6 152 aa9.42□□□□□ -0.9
Ssr1-204ENSMUST00000225319 Rpl18aP62717 176 aaKnown RBP9.42□□□□□ -0.9
Ssr1-204ENSMUST00000225319 Hist1h4aP62806 103 aaKnown RBP9.42□□□□□ -0.9
Ssr1-204ENSMUST00000225319 Igkv8-26A0A075B5N5 123 aa9.42□□□□□ -0.9
Ssr1-204ENSMUST00000225319 Defa1P11477 93 aa9.42□□□□□ -0.9
Ssr1-204ENSMUST00000225319 Gm10320E9PW43 113 aa9.41□□□□□ -0.9
Ssr1-204ENSMUST00000225319 Megf8P60882 2789 aa9.4□□□□□ -0.9
Ssr1-204ENSMUST00000225319 Tmem254aP0DN89 123 aa9.4□□□□□ -0.9
Ssr1-204ENSMUST00000225319 Tmem254bP0DN90 123 aa9.4□□□□□ -0.9
Ssr1-204ENSMUST00000225319 Tmem254cP0DN91 123 aa9.4□□□□□ -0.9
Ssr1-204ENSMUST00000225319 Apoc4Q61268 124 aa9.4□□□□□ -0.9
Ssr1-204ENSMUST00000225319 Ormdl1Q921I0 153 aa9.4□□□□□ -0.9
Ssr1-204ENSMUST00000225319 Gm10308Q9CVR5 141 aa9.39□□□□□ -0.91
Ssr1-204ENSMUST00000225319 Igkv4-58A0A0G2JGI6 119 aa9.38□□□□□ -0.91
Ssr1-204ENSMUST00000225319 PkigO70139 76 aa9.38□□□□□ -0.91
Ssr1-204ENSMUST00000225319 Tenm2Q9WTS5 2764 aa9.38□□□□□ -0.91
Ssr1-204ENSMUST00000225319 Defa25Q5G864 92 aa9.38□□□□□ -0.91
Ssr1-204ENSMUST00000225319 BC048502Q80Y74 154 aa9.38□□□□□ -0.91
Ssr1-204ENSMUST00000225319 Sprr4Q8CGN8 76 aa9.38□□□□□ -0.91
Ssr1-204ENSMUST00000225319 Ufsp1Q9CZP0 217 aa9.38□□□□□ -0.91
Ssr1-204ENSMUST00000225319 FasnP19096 2504 aaKnown RBP9.37□□□□□ -0.91
Ssr1-204ENSMUST00000225319 PrkdcP97313 4128 aa9.37□□□□□ -0.91
Ssr1-204ENSMUST00000225319 Igkv8-27A0A0G2JF28 120 aa9.37□□□□□ -0.91
Ssr1-204ENSMUST00000225319 Igkv8-30A0A140T8M3 121 aa9.37□□□□□ -0.91
Ssr1-204ENSMUST00000225319 Ighv2-5A0A0A6YY69 116 aa9.36□□□□□ -0.91
Ssr1-204ENSMUST00000225319 Defa16P50714 93 aa9.36□□□□□ -0.91
Ssr1-204ENSMUST00000225319 A730009L09RikA0A1B0GS82 72 aa9.35□□□□□ -0.91
Ssr1-204ENSMUST00000225319 2310034G01RikA0A286YDL3 209 aa9.35□□□□□ -0.91
Ssr1-204ENSMUST00000225319 SmcpP15265 143 aa9.35□□□□□ -0.91
Ssr1-204ENSMUST00000225319 Msrb1Q9JLC3 116 aa9.35□□□□□ -0.91
Ssr1-204ENSMUST00000225319 Trav14-1A0A0G2JF94 121 aa9.34□□□□□ -0.91
Ssr1-204ENSMUST00000225319 Gm17577J3QNF7 156 aa9.34□□□□□ -0.91
Ssr1-204ENSMUST00000225319 Defa20Q45VN2 95 aa9.34□□□□□ -0.91
Ssr1-204ENSMUST00000225319 Igkv8-21A0A140T8P7 120 aa9.34□□□□□ -0.91
Ssr1-204ENSMUST00000225319 Lamtor3O88653 124 aa9.34□□□□□ -0.91
Ssr1-204ENSMUST00000225319 9530003J23RikQ8BM26 151 aa9.34□□□□□ -0.91
Ssr1-204ENSMUST00000225319 Cdk2ap2Q9CPY4 127 aa9.34□□□□□ -0.91
Ssr1-204ENSMUST00000225319 Krtap10-10A0A1W2P7T6 217 aa9.33□□□□□ -0.92
Ssr1-204ENSMUST00000225319 Ubl5Q9EPV8 73 aa9.33□□□□□ -0.92
Ssr1-204ENSMUST00000225319 Fras1Q80T14 4010 aa9.33□□□□□ -0.92
Ssr1-204ENSMUST00000225319 E130218I03RikA0A0U1RNU5 63 aa9.32□□□□□ -0.92
Ssr1-204ENSMUST00000225319 Pde6gP09174 87 aa9.32□□□□□ -0.92
Ssr1-204ENSMUST00000225319 Elof1P60003 83 aa9.32□□□□□ -0.92
Ssr1-204ENSMUST00000225319 Camk2n2Q78WH7 79 aa9.32□□□□□ -0.92
Ssr1-204ENSMUST00000225319 Igkv3-12A0A140T8P0 119 aa9.31□□□□□ -0.92
Ssr1-204ENSMUST00000225319 Smim20D3Z7Q2 69 aa9.31□□□□□ -0.92
Ssr1-204ENSMUST00000225319 7530416G11RikJ3QJX6 159 aa9.31□□□□□ -0.92
Ssr1-204ENSMUST00000225319 Sprr1aQ62266 144 aa9.31□□□□□ -0.92
Ssr1-204ENSMUST00000225319 Gm7276Q3TYW4 209 aa9.3□□□□□ -0.92
Ssr1-204ENSMUST00000225319 Gm9918Q8BUR5 174 aa9.3□□□□□ -0.92
Ssr1-204ENSMUST00000225319 A0A286YCN5 57 aa9.29□□□□□ -0.92
Ssr1-204ENSMUST00000225319 Igkv1-88A0A140T8N1 120 aa9.28□□□□□ -0.92
Ssr1-204ENSMUST00000225319 Rbm3O89086 153 aaKnown RBP9.27□□□□□ -0.92
Ssr1-204ENSMUST00000225319 Serp2Q6TAW2 65 aa9.27□□□□□ -0.92
Ssr1-204ENSMUST00000225319 Cystm1Q8K353 104 aa9.27□□□□□ -0.93
Ssr1-204ENSMUST00000225319 Cd164Q9R0L9 197 aa9.27□□□□□ -0.93
Ssr1-204ENSMUST00000225319 Gm11627A6PWP4 55 aa9.26□□□□□ -0.93
Ssr1-204ENSMUST00000225319 D130052B06RikQ3UW13 202 aa9.26□□□□□ -0.93
Ssr1-204ENSMUST00000225319 4930535I16RikQ9CUI2 172 aa9.26□□□□□ -0.93
Ssr1-204ENSMUST00000225319 BaalcQ8VHV1 145 aa9.25□□□□□ -0.93
Ssr1-204ENSMUST00000225319 Ighv2-2A0A075B5P8 116 aa9.24□□□□□ -0.93
Ssr1-204ENSMUST00000225319 Gm9507D3Z5T3 223 aa9.24□□□□□ -0.93
Ssr1-204ENSMUST00000225319 Scgb1b2O35176 93 aa9.24□□□□□ -0.93
Ssr1-204ENSMUST00000225319 P01821 116 aa9.24□□□□□ -0.93
Ssr1-204ENSMUST00000225319 SvipQ3UZP4 77 aa9.23□□□□□ -0.93
Ssr1-204ENSMUST00000225319 Defb40Q70KL2 73 aa9.23□□□□□ -0.93
Ssr1-204ENSMUST00000225319 PlecQ9QXS1 4691 aaKnown RBP9.23□□□□□ -0.93
Ssr1-204ENSMUST00000225319 A730071L15RikQ8C4X0 137 aa9.23□□□□□ -0.93
Ssr1-204ENSMUST00000225319 Fam19a1Q7TPG8 133 aa9.22□□□□□ -0.93
Ssr1-204ENSMUST00000225319 Pou2af1Q64693 256 aa9.21□□□□□ -0.93
Ssr1-204ENSMUST00000225319 MplkipQ9D011 178 aa9.21□□□□□ -0.93
Ssr1-204ENSMUST00000225319 4930518I15RikQ3V2W7 57 aa9.2□□□□□ -0.94
Ssr1-204ENSMUST00000225319 ScxQ64124 207 aa9.2□□□□□ -0.94
Ssr1-204ENSMUST00000225319 Ndufc1Q9CQY9 76 aa9.2□□□□□ -0.94
Ssr1-204ENSMUST00000225319 GhrhP16043 103 aa9.19□□□□□ -0.94
Ssr1-204ENSMUST00000225319 Defa7P50705 93 aa9.19□□□□□ -0.94
Ssr1-204ENSMUST00000225319 Nupr2Q497P3 102 aa9.17□□□□□ -0.94
Ssr1-204ENSMUST00000225319 Defb37Q7TMD2 62 aa9.17□□□□□ -0.94
Ssr1-204ENSMUST00000225319 Igkv8-28A0A0G2JE47 121 aa9.16□□□□□ -0.94
Ssr1-204ENSMUST00000225319 Tmem243B2RVB9 118 aa9.16□□□□□ -0.94
Ssr1-204ENSMUST00000225319 Sfta2E9PXB6 77 aa9.16□□□□□ -0.94
Ssr1-204ENSMUST00000225319 Vpreb2P13373 142 aa9.16□□□□□ -0.94
Ssr1-204ENSMUST00000225319 Gm20726G3UX18 150 aa9.16□□□□□ -0.94
Ssr1-204ENSMUST00000225319 2310050C09RikG5E8Z3 280 aa9.16□□□□□ -0.94
Ssr1-204ENSMUST00000225319 Dmac1Q9CQ00 111 aa9.16□□□□□ -0.94
Ssr1-204ENSMUST00000225319 Naa38Q9D2U5 125 aa9.16□□□□□ -0.94
Ssr1-204ENSMUST00000225319 Wfdc6bF6ULY1 148 aa9.15□□□□□ -0.94
Ssr1-204ENSMUST00000225319 Gm10837Q3UTT8 145 aa9.15□□□□□ -0.94
Ssr1-204ENSMUST00000225319 Igkv1-110A0A0B4J1I0 119 aa9.14□□□□□ -0.95
Ssr1-204ENSMUST00000225319 Igkv1-122A0A140T8M9 119 aa9.14□□□□□ -0.95
Ssr1-204ENSMUST00000225319 Prol1E9PYQ4 312 aa9.14□□□□□ -0.95
Ssr1-204ENSMUST00000225319 Tmem258P61166 79 aa9.14□□□□□ -0.95
Ssr1-204ENSMUST00000225319 Smim29Q8R043 75 aa9.14□□□□□ -0.95
Ssr1-204ENSMUST00000225319 Ly6g6cQ9Z1Q4 126 aa9.14□□□□□ -0.95
Ssr1-204ENSMUST00000225319 Dnah11E9Q7N9 4488 aa9.14□□□□□ -0.95
Ssr1-204ENSMUST00000225319 TgO08710 2766 aa9.14□□□□□ -0.95
Ssr1-204ENSMUST00000225319 Sprr2jO70561 109 aa9.13□□□□□ -0.95
Ssr1-204ENSMUST00000225319 P84750 121 aa9.13□□□□□ -0.95
Ssr1-204ENSMUST00000225319 A830005F24RikQ8BRT5 167 aa9.13□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms