RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Gm35339A0A140LHH9 1649 aa30.01■■■□□ 2.39
Ssr1-204ENSMUST00000225319 NischQ80TM9 1593 aa29.88■■■□□ 2.37
Ssr1-204ENSMUST00000225319 Abcc9P70170 1546 aa29.09■■■□□ 2.25
Ssr1-204ENSMUST00000225319 Abcc8B2RUS7 1588 aa28.66■■■□□ 2.18
Ssr1-204ENSMUST00000225319 ScribQ80U72 1612 aa27.11■■□□□ 1.93
Ssr1-204ENSMUST00000225319 Dcaf1Q80TR8 1506 aa26.75■■□□□ 1.87
Ssr1-204ENSMUST00000225319 Rhox8Q6VSS7 320 aa26.5■■□□□ 1.83
Ssr1-204ENSMUST00000225319 Kdm5dQ62240 1548 aa26.4■■□□□ 1.82
Ssr1-204ENSMUST00000225319 NacadQ5SWP3 1504 aa26.34■■□□□ 1.81
Ssr1-204ENSMUST00000225319 Rb1cc1Q9ESK9 1588 aa26.13■■□□□ 1.77
Ssr1-204ENSMUST00000225319 Ccdc180J3QNE4 1664 aa26.1■■□□□ 1.77
Ssr1-204ENSMUST00000225319 Rtl1Q7M732 1744 aa25.94■■□□□ 1.74
Ssr1-204ENSMUST00000225319 Baz1aO88379 1555 aa25.86■■□□□ 1.73
Ssr1-204ENSMUST00000225319 Sycp2Q9CUU3 1500 aa25.79■■□□□ 1.72
Ssr1-204ENSMUST00000225319 Crybg2B7ZCC2 1516 aa25.68■■□□□ 1.7
Ssr1-204ENSMUST00000225319 BicraF8VPZ9 1578 aa25.29■■□□□ 1.64
Ssr1-204ENSMUST00000225319 Smarca2Q6DIC0 1577 aa25.23■■□□□ 1.63
Ssr1-204ENSMUST00000225319 Zcchc6Q5BLK4 1491 aaKnown RBP25.19■■□□□ 1.62
Ssr1-204ENSMUST00000225319 Cecr2E9Q2Z1 1453 aa24.66■■□□□ 1.54
Ssr1-204ENSMUST00000225319 Ccdc136Q3TVA9 1136 aa24.64■■□□□ 1.53
Ssr1-204ENSMUST00000225319 Smarca4Q3TKT4 1613 aaKnown RBP24.51■■□□□ 1.51
Ssr1-204ENSMUST00000225319 Brd4Q9ESU6 1400 aaKnown RBP24.49■■□□□ 1.51
Ssr1-204ENSMUST00000225319 Trim41Q5NCC3 630 aa24.42■■□□□ 1.5
Ssr1-204ENSMUST00000225319 Synj1Q8CHC4 1574 aa24.35■■□□□ 1.49
Ssr1-204ENSMUST00000225319 Pds5bQ4VA53 1446 aaKnown RBP24.34■■□□□ 1.49
Ssr1-204ENSMUST00000225319 Atad2bE9Q166 1460 aaKnown RBP24.33■■□□□ 1.49
Ssr1-204ENSMUST00000225319 CftrP26361 1476 aa24.32■■□□□ 1.48
Ssr1-204ENSMUST00000225319 Cttnbp2B9EJA2 1648 aa24.3■■□□□ 1.48
Ssr1-204ENSMUST00000225319 Iqgap2Q3UQ44 1575 aa24.23■■□□□ 1.47
Ssr1-204ENSMUST00000225319 HrcG5E8J6 738 aa24.02■■□□□ 1.44
Ssr1-204ENSMUST00000225319 Golga3P55937 1487 aa23.98■■□□□ 1.43
Ssr1-204ENSMUST00000225319 Top2bQ64511 1612 aa23.9■■□□□ 1.42
Ssr1-204ENSMUST00000225319 Wdr62Q3U3T8 1523 aa23.9■■□□□ 1.42
Ssr1-204ENSMUST00000225319 Thoc2B1AZI6 1594 aaKnown RBP23.86■■□□□ 1.41
Ssr1-204ENSMUST00000225319 Ercc6F8VPZ5 1481 aa23.83■■□□□ 1.41
Ssr1-204ENSMUST00000225319 Frmpd1A2AKB4 1549 aa23.83■■□□□ 1.41
Ssr1-204ENSMUST00000225319 Esf1Q3V1V3 845 aaKnown RBP23.73■■□□□ 1.39
Ssr1-204ENSMUST00000225319 Cngb1E1AZ71 1325 aa23.66■■□□□ 1.38
Ssr1-204ENSMUST00000225319 Cep164Q5DU05 1446 aa23.62■■□□□ 1.37
Ssr1-204ENSMUST00000225319 Unc13aQ4KUS2 1712 aa23.6■■□□□ 1.37
Ssr1-204ENSMUST00000225319 Rsf1E9PWW9 1441 aaKnown RBP23.57■■□□□ 1.36
Ssr1-204ENSMUST00000225319 Cc2d2aQ8CFW7 1633 aa23.57■■□□□ 1.36
Ssr1-204ENSMUST00000225319 Fmn1Q05860 1466 aa23.53■■□□□ 1.36
Ssr1-204ENSMUST00000225319 Ccdc88bQ4QRL3 1481 aa23.53■■□□□ 1.36
Ssr1-204ENSMUST00000225319 Fam135aQ6NS59 1506 aa23.51■■□□□ 1.35
Ssr1-204ENSMUST00000225319 TnnQ80Z71 1560 aa23.48■■□□□ 1.35
Ssr1-204ENSMUST00000225319 Phldb1Q6PDH0 1371 aaKnown RBP23.46■■□□□ 1.35
Ssr1-204ENSMUST00000225319 Lamc3Q9R0B6 1581 aa23.42■■□□□ 1.34
Ssr1-204ENSMUST00000225319 Chic1Q8CBW7 227 aa23.4■■□□□ 1.34
Ssr1-204ENSMUST00000225319 Baz1bQ9Z277 1479 aa23.32■■□□□ 1.32
Ssr1-204ENSMUST00000225319 Rpgrip1Q9EPQ2 1331 aa23.31■■□□□ 1.32
Ssr1-204ENSMUST00000225319 Top2aQ01320 1528 aaKnown RBP23.3■■□□□ 1.32
Ssr1-204ENSMUST00000225319 Kif15Q6P9L6 1387 aa23.21■■□□□ 1.31
Ssr1-204ENSMUST00000225319 Camsap1A2AHC3 1581 aa23.09■■□□□ 1.29
Ssr1-204ENSMUST00000225319 Ubl4bQ9CQ84 188 aa23.08■■□□□ 1.28
Ssr1-204ENSMUST00000225319 Dnajc5bQ9CQ94 199 aa23.04■■□□□ 1.28
Ssr1-204ENSMUST00000225319 Cux2P70298 1426 aa23.01■■□□□ 1.27
Ssr1-204ENSMUST00000225319 Ccdc18Q640L5 1455 aa22.99■■□□□ 1.27
Ssr1-204ENSMUST00000225319 Rapgef2Q8CHG7 1496 aa22.96■■□□□ 1.27
Ssr1-204ENSMUST00000225319 Mrc2Q64449 1479 aa22.9■■□□□ 1.26
Ssr1-204ENSMUST00000225319 Gab3Q8BSM5 595 aa22.88■■□□□ 1.25
Ssr1-204ENSMUST00000225319 Acin1Q9JIX8 1338 aaKnown RBP22.87■■□□□ 1.25
Ssr1-204ENSMUST00000225319 NrkQ9R0G8 1455 aa22.86■■□□□ 1.25
Ssr1-204ENSMUST00000225319 Grin2bQ01097 1482 aa22.85■■□□□ 1.25
Ssr1-204ENSMUST00000225319 Eif4g1Q6NZJ6 1600 aaKnown RBP22.8■■□□□ 1.24
Ssr1-204ENSMUST00000225319 Shroom4Q1W617 1475 aa22.77■■□□□ 1.24
Ssr1-204ENSMUST00000225319 Cep162Q6ZQ06 1403 aa22.74■■□□□ 1.23
Ssr1-204ENSMUST00000225319 Npm1Q61937 292 aaKnown RBP22.74■■□□□ 1.23
Ssr1-204ENSMUST00000225319 LrpprcQ6PB66 1392 aaKnown RBP22.74■■□□□ 1.23
Ssr1-204ENSMUST00000225319 PtprkP35822 1457 aa22.73■■□□□ 1.23
Ssr1-204ENSMUST00000225319 Il27Q8K3I6 234 aa22.71■■□□□ 1.23
Ssr1-204ENSMUST00000225319 PogzQ8BZH4 1409 aaKnown RBP22.7■■□□□ 1.23
Ssr1-204ENSMUST00000225319 Kif21aQ9QXL2 1672 aa22.67■■□□□ 1.22
Ssr1-204ENSMUST00000225319 Efcab5A0JP43 1406 aa22.65■■□□□ 1.22
Ssr1-204ENSMUST00000225319 Duox2A2AQ99 1517 aa22.61■■□□□ 1.21
Ssr1-204ENSMUST00000225319 Map3k1P53349 1493 aa22.61■■□□□ 1.21
Ssr1-204ENSMUST00000225319 Dhx29Q6PGC1 1365 aaKnown RBP22.6■■□□□ 1.21
Ssr1-204ENSMUST00000225319 Arhgap35Q91YM2 1499 aa22.59■■□□□ 1.21
Ssr1-204ENSMUST00000225319 Crocc2F6XLV1 1638 aa22.55■■□□□ 1.2
Ssr1-204ENSMUST00000225319 Npm2Q80W85 207 aa22.54■■□□□ 1.2
Ssr1-204ENSMUST00000225319 Mroh2bQ7M6Y6 1581 aa22.52■■□□□ 1.2
Ssr1-204ENSMUST00000225319 Ehmt2Q9Z148 1263 aaKnown RBP22.48■■□□□ 1.19
Ssr1-204ENSMUST00000225319 Samd9lQ69Z37 1561 aa22.48■■□□□ 1.19
Ssr1-204ENSMUST00000225319 AqrQ8CFQ3 1481 aaKnown RBP22.45■■□□□ 1.18
Ssr1-204ENSMUST00000225319 SynmQ70IV5 1561 aa22.38■■□□□ 1.17
Ssr1-204ENSMUST00000225319 Urb2E9Q7L1 1524 aaKnown RBP22.34■■□□□ 1.17
Ssr1-204ENSMUST00000225319 Lrriq1Q0P5X1 1673 aa22.34■■□□□ 1.17
Ssr1-204ENSMUST00000225319 Plb1Q3TTY0 1478 aa22.33■■□□□ 1.17
Ssr1-204ENSMUST00000225319 Clip1Q922J3 1391 aa22.32■■□□□ 1.16
Ssr1-204ENSMUST00000225319 Carmil1Q6EDY6 1374 aa22.29■■□□□ 1.16
Ssr1-204ENSMUST00000225319 Gpatch8A2A6A1 1505 aa22.29■■□□□ 1.16
Ssr1-204ENSMUST00000225319 Myt1lP97500 1187 aa22.28■■□□□ 1.16
Ssr1-204ENSMUST00000225319 Ift140E9PY46 1464 aa22.25■■□□□ 1.15
Ssr1-204ENSMUST00000225319 Pbrm1Q8BSQ9 1634 aaKnown RBP22.24■■□□□ 1.15
Ssr1-204ENSMUST00000225319 Rad54l2Q99NG0 1466 aa22.23■■□□□ 1.15
Ssr1-204ENSMUST00000225319 Magi3Q9EQJ9 1476 aa22.23■■□□□ 1.15
Ssr1-204ENSMUST00000225319 Disp1Q3TDN0 1521 aa22.22■■□□□ 1.15
Ssr1-204ENSMUST00000225319 Erich3F6QRE9 1637 aa22.22■■□□□ 1.15
Ssr1-204ENSMUST00000225319 Zeb1Q64318 1117 aa22.2■■□□□ 1.15
Ssr1-204ENSMUST00000225319 Pla2r1Q62028 1487 aa22.19■■□□□ 1.14
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms