RNA–Protein interactions for RNA: ENSMUST00000199079.1

Rpf1-203, Transcript of Ribosome production factor 1, mousemouse

TSL 1 (best) BASIC

Gene Rpf1, Length 1,978 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1-203ENSMUST00000199079 P01821 116 aa11.26□□□□□ -0.61
Rpf1-203ENSMUST00000199079 Gm7276Q3TYW4 209 aa11.26□□□□□ -0.61
Rpf1-203ENSMUST00000199079 Sprr4Q8CGN8 76 aa11.26□□□□□ -0.61
Rpf1-203ENSMUST00000199079 FcgbpE9Q0B5 2583 aa11.25□□□□□ -0.61
Rpf1-203ENSMUST00000199079 Camk2n2Q78WH7 79 aa11.25□□□□□ -0.61
Rpf1-203ENSMUST00000199079 Defa20Q45VN2 95 aa11.25□□□□□ -0.61
Rpf1-203ENSMUST00000199079 4930518I15RikQ3V2W7 57 aa11.24□□□□□ -0.61
Rpf1-203ENSMUST00000199079 Ndufc1Q9CQY9 76 aa11.23□□□□□ -0.61
Rpf1-203ENSMUST00000199079 4930535I16RikQ9CUI2 172 aa11.23□□□□□ -0.61
Rpf1-203ENSMUST00000199079 GhrhP16043 103 aa11.22□□□□□ -0.61
Rpf1-203ENSMUST00000199079 Fam19a1Q7TPG8 133 aa11.22□□□□□ -0.61
Rpf1-203ENSMUST00000199079 Gm16181B0V2H2 73 aa11.21□□□□□ -0.62
Rpf1-203ENSMUST00000199079 Gm3618D3Z4P5 127 aa11.21□□□□□ -0.62
Rpf1-203ENSMUST00000199079 Defa7P50705 93 aa11.21□□□□□ -0.62
Rpf1-203ENSMUST00000199079 A730071L15RikQ8C4X0 137 aa11.21□□□□□ -0.62
Rpf1-203ENSMUST00000199079 Gm2916Q9D9B9 127 aa11.21□□□□□ -0.62
Rpf1-203ENSMUST00000199079 AplnQ9R0R4 77 aa11.21□□□□□ -0.62
Rpf1-203ENSMUST00000199079 Igkv1-88A0A140T8N1 120 aa11.2□□□□□ -0.62
Rpf1-203ENSMUST00000199079 Tmem258P61166 79 aa11.2□□□□□ -0.62
Rpf1-203ENSMUST00000199079 Cd164Q9R0L9 197 aa11.2□□□□□ -0.62
Rpf1-203ENSMUST00000199079 Tmem243B2RVB9 118 aa11.19□□□□□ -0.62
Rpf1-203ENSMUST00000199079 Spata3Q9D9T6 193 aa11.19□□□□□ -0.62
Rpf1-203ENSMUST00000199079 A0A286YCN5 57 aa11.18□□□□□ -0.62
Rpf1-203ENSMUST00000199079 MplkipQ9D011 178 aa11.18□□□□□ -0.62
Rpf1-203ENSMUST00000199079 Wfdc17Q5SSJ1 76 aa11.17□□□□□ -0.62
Rpf1-203ENSMUST00000199079 Gm20726G3UX18 150 aa11.17□□□□□ -0.62
Rpf1-203ENSMUST00000199079 Rps28P62858 69 aaKnown RBP11.17□□□□□ -0.62
Rpf1-203ENSMUST00000199079 Gm19935A0A1B0GSF9 52 aa11.16□□□□□ -0.62
Rpf1-203ENSMUST00000199079 Nbeal2Q6ZQA0 2742 aa11.15□□□□□ -0.62
Rpf1-203ENSMUST00000199079 Stab1Q8R4Y4 2571 aa11.14□□□□□ -0.63
Rpf1-203ENSMUST00000199079 Pou2af1Q64693 256 aa11.14□□□□□ -0.63
Rpf1-203ENSMUST00000199079 Hspg2Q05793 3707 aaKnown RBP11.14□□□□□ -0.63
Rpf1-203ENSMUST00000199079 Defa21Q8C1P2 93 aa11.14□□□□□ -0.63
Rpf1-203ENSMUST00000199079 Naa38Q9D2U5 125 aa11.14□□□□□ -0.63
Rpf1-203ENSMUST00000199079 Tex15F8VPN2 2785 aa11.13□□□□□ -0.63
Rpf1-203ENSMUST00000199079 Igkv1-110A0A0B4J1I0 119 aa11.12□□□□□ -0.63
Rpf1-203ENSMUST00000199079 Igkv8-28A0A0G2JE47 121 aa11.12□□□□□ -0.63
Rpf1-203ENSMUST00000199079 Vpreb2P13373 142 aa11.11□□□□□ -0.63
Rpf1-203ENSMUST00000199079 Gm11627A6PWP4 55 aa11.1□□□□□ -0.63
Rpf1-203ENSMUST00000199079 6430550D23RikE9Q1X6 194 aa11.1□□□□□ -0.63
Rpf1-203ENSMUST00000199079 A830005F24RikQ8BRT5 167 aa11.1□□□□□ -0.63
Rpf1-203ENSMUST00000199079 Sfta2E9PXB6 77 aa11.1□□□□□ -0.63
Rpf1-203ENSMUST00000199079 Sprr2jO70561 109 aa11.09□□□□□ -0.63
Rpf1-203ENSMUST00000199079 Defb37Q7TMD2 62 aa11.08□□□□□ -0.64
Rpf1-203ENSMUST00000199079 Gm17689B3GLJ4 109 aa11.07□□□□□ -0.64
Rpf1-203ENSMUST00000199079 Dmac1Q9CQ00 111 aa11.07□□□□□ -0.64
Rpf1-203ENSMUST00000199079 Defa23Q5G866 93 aa11.07□□□□□ -0.64
Rpf1-203ENSMUST00000199079 Sprr1aQ62266 144 aa11.06□□□□□ -0.64
Rpf1-203ENSMUST00000199079 Tenm1Q9WTS4 2731 aa11.06□□□□□ -0.64
Rpf1-203ENSMUST00000199079 Gm16485Q8C4B7 115 aa11.05□□□□□ -0.64
Rpf1-203ENSMUST00000199079 Fam229bQ8CF36 80 aa11.05□□□□□ -0.64
Rpf1-203ENSMUST00000199079 Megf8P60882 2789 aa11.05□□□□□ -0.64
Rpf1-203ENSMUST00000199079 Igkv1-122A0A140T8M9 119 aa11.04□□□□□ -0.64
Rpf1-203ENSMUST00000199079 Krtap10-10A0A1W2P7T6 217 aa11.03□□□□□ -0.64
Rpf1-203ENSMUST00000199079 Prol1E9PYQ4 312 aa11.03□□□□□ -0.64
Rpf1-203ENSMUST00000199079 B230307C23RikQ8BLB2 64 aa11.03□□□□□ -0.64
Rpf1-203ENSMUST00000199079 Wfdc6bF6ULY1 148 aa11.02□□□□□ -0.65
Rpf1-203ENSMUST00000199079 A930002H24RikQ8C8Y3 163 aa11.02□□□□□ -0.65
Rpf1-203ENSMUST00000199079 Kmt2aP55200 3966 aa11.01□□□□□ -0.65
Rpf1-203ENSMUST00000199079 P84750 121 aa11.01□□□□□ -0.65
Rpf1-203ENSMUST00000199079 Smim29Q8R043 75 aa11.01□□□□□ -0.65
Rpf1-203ENSMUST00000199079 Defa4P28311 92 aa11.01□□□□□ -0.65
Rpf1-203ENSMUST00000199079 Cox6a2P43023 97 aa11□□□□□ -0.65
Rpf1-203ENSMUST00000199079 Fam19a3Q7TPG6 132 aa11□□□□□ -0.65
Rpf1-203ENSMUST00000199079 Samd13D3YUG0 102 aa10.99□□□□□ -0.65
Rpf1-203ENSMUST00000199079 Gm7138L7N2C3 230 aa10.98□□□□□ -0.65
Rpf1-203ENSMUST00000199079 Gm3238W4VSP7 230 aa10.98□□□□□ -0.65
Rpf1-203ENSMUST00000199079 Obox2E9PXV9 151 aa10.97□□□□□ -0.65
Rpf1-203ENSMUST00000199079 Gm36176A0A1W2P8D5 158 aa10.96□□□□□ -0.66
Rpf1-203ENSMUST00000199079 A0A286YE02 88 aa10.96□□□□□ -0.66
Rpf1-203ENSMUST00000199079 AW011738F6S7Q2 159 aa10.95□□□□□ -0.66
Rpf1-203ENSMUST00000199079 A330070K13RikQ8CA53 115 aa10.95□□□□□ -0.66
Rpf1-203ENSMUST00000199079 Dnah3Q8BW94 4083 aa10.94□□□□□ -0.66
Rpf1-203ENSMUST00000199079 Gm37389A0A0A6YW05 95 aa10.94□□□□□ -0.66
Rpf1-203ENSMUST00000199079 Gm12353A2AGJ4 60 aa10.94□□□□□ -0.66
Rpf1-203ENSMUST00000199079 BikO70337 150 aa10.94□□□□□ -0.66
Rpf1-203ENSMUST00000199079 P06320 134 aa10.94□□□□□ -0.66
Rpf1-203ENSMUST00000199079 Igkv3-12A0A140T8P0 119 aa10.94□□□□□ -0.66
Rpf1-203ENSMUST00000199079 Gm11011D3Z3L9 86 aa10.94□□□□□ -0.66
Rpf1-203ENSMUST00000199079 Smlr1J3QMJ4 66 aa10.92□□□□□ -0.66
Rpf1-203ENSMUST00000199079 Igkv3-2A0A075B5P0 119 aa10.92□□□□□ -0.66
Rpf1-203ENSMUST00000199079 Vpreb1P13372 142 aa10.9□□□□□ -0.66
Rpf1-203ENSMUST00000199079 Fam168bQ80XQ8 194 aa10.9□□□□□ -0.66
Rpf1-203ENSMUST00000199079 Gm37013Q8K491 104 aa10.9□□□□□ -0.66
Rpf1-203ENSMUST00000199079 Vpreb3D3Z6J4 130 aa10.89□□□□□ -0.67
Rpf1-203ENSMUST00000199079 Gm10401E9Q3K6 71 aa10.89□□□□□ -0.67
Rpf1-203ENSMUST00000199079 Sslp1Q3UN54 99 aa10.88□□□□□ -0.67
Rpf1-203ENSMUST00000199079 ApcQ61315 2845 aa10.88□□□□□ -0.67
Rpf1-203ENSMUST00000199079 U90926O08546 118 aa10.87□□□□□ -0.67
Rpf1-203ENSMUST00000199079 Igkv3-4A0A140T8Q4 119 aa10.86□□□□□ -0.67
Rpf1-203ENSMUST00000199079 Fam104aA2A6P4 185 aa10.86□□□□□ -0.67
Rpf1-203ENSMUST00000199079 Mrpl34Q99N91 92 aa10.86□□□□□ -0.67
Rpf1-203ENSMUST00000199079 Serp1Q9Z1W5 66 aa10.86□□□□□ -0.67
Rpf1-203ENSMUST00000199079 PscaP57096 123 aa10.85□□□□□ -0.67
Rpf1-203ENSMUST00000199079 H2al1aQ5M8Q2 105 aa10.85□□□□□ -0.67
Rpf1-203ENSMUST00000199079 C130032M10RikQ8C888 123 aa10.85□□□□□ -0.67
Rpf1-203ENSMUST00000199079 UqcrqQ9CQ69 82 aa10.85□□□□□ -0.67
Rpf1-203ENSMUST00000199079 Fam19a5Q91WE9 132 aa10.85□□□□□ -0.67
Rpf1-203ENSMUST00000199079 PtprqP0C5E4 2300 aa10.83□□□□□ -0.68
Rpf1-203ENSMUST00000199079 Prr15lQ8JZM2 100 aa10.83□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 137.8 ms