RNA–Protein interactions for RNA: ENSMUST00000199079.1

Rpf1-203, Transcript of Ribosome production factor 1, mousemouse

TSL 1 (best) BASIC

Gene Rpf1, Length 1,978 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1-203ENSMUST00000199079 NischQ80TM9 1593 aa32.79■■■□□ 2.84
Rpf1-203ENSMUST00000199079 Gm35339A0A140LHH9 1649 aa32.41■■■□□ 2.78
Rpf1-203ENSMUST00000199079 Abcc9P70170 1546 aa31.94■■■□□ 2.7
Rpf1-203ENSMUST00000199079 Abcc8B2RUS7 1588 aa31.14■■■□□ 2.58
Rpf1-203ENSMUST00000199079 Rtl1Q7M732 1744 aa30.48■■■□□ 2.47
Rpf1-203ENSMUST00000199079 Rhox8Q6VSS7 320 aa30.15■■■□□ 2.42
Rpf1-203ENSMUST00000199079 Ccdc180J3QNE4 1664 aa29.81■■■□□ 2.36
Rpf1-203ENSMUST00000199079 Dcaf1Q80TR8 1506 aa29.3■■■□□ 2.28
Rpf1-203ENSMUST00000199079 Zcchc6Q5BLK4 1491 aaKnown RBP29.11■■■□□ 2.25
Rpf1-203ENSMUST00000199079 ScribQ80U72 1612 aa28.91■■■□□ 2.22
Rpf1-203ENSMUST00000199079 Rb1cc1Q9ESK9 1588 aa28.74■■■□□ 2.19
Rpf1-203ENSMUST00000199079 Baz1aO88379 1555 aa28.48■■■□□ 2.15
Rpf1-203ENSMUST00000199079 Kdm5dQ62240 1548 aa28.41■■■□□ 2.14
Rpf1-203ENSMUST00000199079 Rpgrip1Q9EPQ2 1331 aa28.34■■■□□ 2.13
Rpf1-203ENSMUST00000199079 HrcG5E8J6 738 aa28.29■■■□□ 2.12
Rpf1-203ENSMUST00000199079 NacadQ5SWP3 1504 aa28.25■■■□□ 2.11
Rpf1-203ENSMUST00000199079 Crybg2B7ZCC2 1516 aa28.09■■■□□ 2.09
Rpf1-203ENSMUST00000199079 Ccdc136Q3TVA9 1136 aa27.89■■■□□ 2.06
Rpf1-203ENSMUST00000199079 Smarca2Q6DIC0 1577 aa27.85■■■□□ 2.05
Rpf1-203ENSMUST00000199079 Acin1Q9JIX8 1338 aaKnown RBP27.69■■■□□ 2.02
Rpf1-203ENSMUST00000199079 Sycp2Q9CUU3 1500 aa27.61■■■□□ 2.01
Rpf1-203ENSMUST00000199079 Trim41Q5NCC3 630 aa27.6■■■□□ 2.01
Rpf1-203ENSMUST00000199079 Cep164Q5DU05 1446 aa27.41■■□□□ 1.98
Rpf1-203ENSMUST00000199079 Brd4Q9ESU6 1400 aaKnown RBP27.18■■□□□ 1.94
Rpf1-203ENSMUST00000199079 Ehmt2Q9Z148 1263 aaKnown RBP27.05■■□□□ 1.92
Rpf1-203ENSMUST00000199079 Cecr2E9Q2Z1 1453 aa26.93■■□□□ 1.9
Rpf1-203ENSMUST00000199079 BicraF8VPZ9 1578 aa26.93■■□□□ 1.9
Rpf1-203ENSMUST00000199079 Golga3P55937 1487 aa26.9■■□□□ 1.9
Rpf1-203ENSMUST00000199079 Rsf1E9PWW9 1441 aaKnown RBP26.87■■□□□ 1.89
Rpf1-203ENSMUST00000199079 Synj1Q8CHC4 1574 aa26.84■■□□□ 1.89
Rpf1-203ENSMUST00000199079 Cngb1E1AZ71 1325 aa26.73■■□□□ 1.87
Rpf1-203ENSMUST00000199079 CftrP26361 1476 aa26.7■■□□□ 1.86
Rpf1-203ENSMUST00000199079 Chic1Q8CBW7 227 aa26.67■■□□□ 1.86
Rpf1-203ENSMUST00000199079 Ccdc88bQ4QRL3 1481 aa26.65■■□□□ 1.86
Rpf1-203ENSMUST00000199079 Cttnbp2B9EJA2 1648 aa26.64■■□□□ 1.86
Rpf1-203ENSMUST00000199079 Top2bQ64511 1612 aa26.64■■□□□ 1.86
Rpf1-203ENSMUST00000199079 Dnajc5bQ9CQ94 199 aa26.49■■□□□ 1.83
Rpf1-203ENSMUST00000199079 Smarca4Q3TKT4 1613 aaKnown RBP26.46■■□□□ 1.83
Rpf1-203ENSMUST00000199079 Pcgf6Q99NA9 353 aa26.41■■□□□ 1.82
Rpf1-203ENSMUST00000199079 Gab3Q8BSM5 595 aa26.37■■□□□ 1.81
Rpf1-203ENSMUST00000199079 Esf1Q3V1V3 845 aaKnown RBP26.33■■□□□ 1.8
Rpf1-203ENSMUST00000199079 Cc2d2aQ8CFW7 1633 aa26.24■■□□□ 1.79
Rpf1-203ENSMUST00000199079 Pds5bQ4VA53 1446 aaKnown RBP26.23■■□□□ 1.79
Rpf1-203ENSMUST00000199079 Fmn1Q05860 1466 aa26.22■■□□□ 1.79
Rpf1-203ENSMUST00000199079 NefmP08553 848 aa26.15■■□□□ 1.78
Rpf1-203ENSMUST00000199079 Rapgef2Q8CHG7 1496 aa26.14■■□□□ 1.77
Rpf1-203ENSMUST00000199079 Top2aQ01320 1528 aaKnown RBP26.12■■□□□ 1.77
Rpf1-203ENSMUST00000199079 Iqgap2Q3UQ44 1575 aa26.05■■□□□ 1.76
Rpf1-203ENSMUST00000199079 Thoc2B1AZI6 1594 aaKnown RBP26.04■■□□□ 1.76
Rpf1-203ENSMUST00000199079 Mier1Q5UAK0 511 aa25.95■■□□□ 1.74
Rpf1-203ENSMUST00000199079 Atad2bE9Q166 1460 aaKnown RBP25.94■■□□□ 1.74
Rpf1-203ENSMUST00000199079 Supt5hO55201 1082 aaKnown RBP25.93■■□□□ 1.74
Rpf1-203ENSMUST00000199079 Cep162Q6ZQ06 1403 aa25.85■■□□□ 1.73
Rpf1-203ENSMUST00000199079 TnnQ80Z71 1560 aa25.79■■□□□ 1.72
Rpf1-203ENSMUST00000199079 Eif4g1Q6NZJ6 1600 aaKnown RBP25.75■■□□□ 1.71
Rpf1-203ENSMUST00000199079 Ercc6F8VPZ5 1481 aa25.66■■□□□ 1.7
Rpf1-203ENSMUST00000199079 Zeb1Q64318 1117 aa25.6■■□□□ 1.69
Rpf1-203ENSMUST00000199079 Wdr62Q3U3T8 1523 aa25.52■■□□□ 1.68
Rpf1-203ENSMUST00000199079 Lamc3Q9R0B6 1581 aa25.5■■□□□ 1.67
Rpf1-203ENSMUST00000199079 UbtfP25976 765 aaKnown RBP25.49■■□□□ 1.67
Rpf1-203ENSMUST00000199079 Frmpd1A2AKB4 1549 aa25.47■■□□□ 1.67
Rpf1-203ENSMUST00000199079 Npm2Q80W85 207 aa25.46■■□□□ 1.67
Rpf1-203ENSMUST00000199079 NrkQ9R0G8 1455 aa25.45■■□□□ 1.66
Rpf1-203ENSMUST00000199079 Clip1Q922J3 1391 aa25.42■■□□□ 1.66
Rpf1-203ENSMUST00000199079 Myt1lP97500 1187 aa25.42■■□□□ 1.66
Rpf1-203ENSMUST00000199079 Fam135aQ6NS59 1506 aa25.42■■□□□ 1.66
Rpf1-203ENSMUST00000199079 Arhgap35Q91YM2 1499 aa25.39■■□□□ 1.65
Rpf1-203ENSMUST00000199079 Las1lA2BE28 776 aaKnown RBP25.34■■□□□ 1.65
Rpf1-203ENSMUST00000199079 Sall2Q9QX96 1004 aa25.34■■□□□ 1.65
Rpf1-203ENSMUST00000199079 Map3k1P53349 1493 aa25.31■■□□□ 1.64
Rpf1-203ENSMUST00000199079 Ncapd3Q6ZQK0 1506 aa25.28■■□□□ 1.64
Rpf1-203ENSMUST00000199079 Shroom4Q1W617 1475 aa25.27■■□□□ 1.64
Rpf1-203ENSMUST00000199079 Ccdc18Q640L5 1455 aa25.26■■□□□ 1.63
Rpf1-203ENSMUST00000199079 Camsap1A2AHC3 1581 aa25.25■■□□□ 1.63
Rpf1-203ENSMUST00000199079 Phldb1Q6PDH0 1371 aaKnown RBP25.24■■□□□ 1.63
Rpf1-203ENSMUST00000199079 Neurod1Q60867 357 aa25.24■■□□□ 1.63
Rpf1-203ENSMUST00000199079 Eea1Q8BL66 1411 aa25.24■■□□□ 1.63
Rpf1-203ENSMUST00000199079 PtprkP35822 1457 aa25.23■■□□□ 1.63
Rpf1-203ENSMUST00000199079 Unc13aQ4KUS2 1712 aa25.23■■□□□ 1.63
Rpf1-203ENSMUST00000199079 Kif15Q6P9L6 1387 aa25.19■■□□□ 1.62
Rpf1-203ENSMUST00000199079 Arap1Q4LDD4 1452 aa25.15■■□□□ 1.62
Rpf1-203ENSMUST00000199079 Arhgef5E9Q7D5 1581 aa25.15■■□□□ 1.62
Rpf1-203ENSMUST00000199079 Baz1bQ9Z277 1479 aa25.11■■□□□ 1.61
Rpf1-203ENSMUST00000199079 ClspnQ80YR7 1315 aa25.1■■□□□ 1.61
Rpf1-203ENSMUST00000199079 Plekhg3Q4VAC9 1341 aa25.09■■□□□ 1.61
Rpf1-203ENSMUST00000199079 Grin2bQ01097 1482 aa25.08■■□□□ 1.61
Rpf1-203ENSMUST00000199079 TonslQ6NZL6 1363 aa25.08■■□□□ 1.6
Rpf1-203ENSMUST00000199079 Ubl4bQ9CQ84 188 aa25.07■■□□□ 1.6
Rpf1-203ENSMUST00000199079 Erich3F6QRE9 1637 aa25.05■■□□□ 1.6
Rpf1-203ENSMUST00000199079 AqrQ8CFQ3 1481 aaKnown RBP25.04■■□□□ 1.6
Rpf1-203ENSMUST00000199079 Setd5Q5XJV7 1441 aa25.02■■□□□ 1.6
Rpf1-203ENSMUST00000199079 Mroh2bQ7M6Y6 1581 aa25.02■■□□□ 1.6
Rpf1-203ENSMUST00000199079 Aebp2Q9Z248 504 aaKnown RBP25.01■■□□□ 1.59
Rpf1-203ENSMUST00000199079 Tiam1Q60610 1591 aa25■■□□□ 1.59
Rpf1-203ENSMUST00000199079 Wdr66E9Q743 1299 aa25■■□□□ 1.59
Rpf1-203ENSMUST00000199079 TchhA0A0B4J1F9 1599 aa24.96■■□□□ 1.59
Rpf1-203ENSMUST00000199079 Kdm5bQ80Y84 1544 aa24.95■■□□□ 1.58
Rpf1-203ENSMUST00000199079 Anks4bQ8K3X6 423 aa24.93■■□□□ 1.58
Rpf1-203ENSMUST00000199079 Ankrd26Q811D2 1581 aa24.91■■□□□ 1.58
Rpf1-203ENSMUST00000199079 Il27Q8K3I6 234 aa24.9■■□□□ 1.58
Retrieved 100 of 22,080 RNA–protein pairs in 62.1 ms