RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Plac8Q9JI48 112 aa5.71□□□□□ -1.5
Trim39-201ENSMUST00000042717 TgO08710 2766 aa5.7□□□□□ -1.5
Trim39-201ENSMUST00000042717 PlecQ9QXS1 4691 aaKnown RBP5.7□□□□□ -1.5
Trim39-201ENSMUST00000042717 Trav13n-2A0A0G2JF93 110 aa5.7□□□□□ -1.5
Trim39-201ENSMUST00000042717 4930519P11RikQ9CUJ8 166 aa5.7□□□□□ -1.5
Trim39-201ENSMUST00000042717 Igkv3-12A0A140T8P0 119 aa5.7□□□□□ -1.5
Trim39-201ENSMUST00000042717 Rpl18aP62717 176 aaKnown RBP5.7□□□□□ -1.5
Trim39-201ENSMUST00000042717 Fam19a1Q7TPG8 133 aa5.7□□□□□ -1.5
Trim39-201ENSMUST00000042717 Apoc4Q61268 124 aa5.69□□□□□ -1.5
Trim39-201ENSMUST00000042717 Krtap10-4Q08EG8 221 aa5.69□□□□□ -1.5
Trim39-201ENSMUST00000042717 Defb40Q70KL2 73 aa5.69□□□□□ -1.5
Trim39-201ENSMUST00000042717 Trav14-1A0A0G2JF94 121 aa5.68□□□□□ -1.5
Trim39-201ENSMUST00000042717 Gm28374F6SG70 93 aa5.68□□□□□ -1.5
Trim39-201ENSMUST00000042717 Gm17577J3QNF7 156 aa5.68□□□□□ -1.5
Trim39-201ENSMUST00000042717 Rps28P62858 69 aaKnown RBP5.68□□□□□ -1.5
Trim39-201ENSMUST00000042717 Igkv8-18A0A0B4J1J3 123 aa5.68□□□□□ -1.5
Trim39-201ENSMUST00000042717 Ube2d4D3YUH6 135 aa5.68□□□□□ -1.5
Trim39-201ENSMUST00000042717 Gm10135F6TEE5 83 aa5.68□□□□□ -1.5
Trim39-201ENSMUST00000042717 Gm10837Q3UTT8 145 aa5.68□□□□□ -1.5
Trim39-201ENSMUST00000042717 Dnal4Q9DCM4 105 aa5.67□□□□□ -1.5
Trim39-201ENSMUST00000042717 H2al1bA0A087WP11 105 aa5.66□□□□□ -1.5
Trim39-201ENSMUST00000042717 H2al1kJ3QP08 105 aa5.66□□□□□ -1.5
Trim39-201ENSMUST00000042717 H2al1eQ810S6 105 aa5.66□□□□□ -1.5
Trim39-201ENSMUST00000042717 H2al1mQ9DAD9 105 aa5.66□□□□□ -1.5
Trim39-201ENSMUST00000042717 Znf414Q9DCK4 299 aa5.66□□□□□ -1.5
Trim39-201ENSMUST00000042717 Dnah11E9Q7N9 4488 aa5.66□□□□□ -1.5
Trim39-201ENSMUST00000042717 Fam168bQ80XQ8 194 aa5.66□□□□□ -1.5
Trim39-201ENSMUST00000042717 Gm5617Q91VN2 117 aa5.66□□□□□ -1.5
Trim39-201ENSMUST00000042717 Cdk2ap2Q9CPY4 127 aa5.66□□□□□ -1.5
Trim39-201ENSMUST00000042717 Igkv1-35A0A0G2JDE5 120 aa5.66□□□□□ -1.5
Trim39-201ENSMUST00000042717 E130218I03RikA0A0U1RNU5 63 aa5.66□□□□□ -1.5
Trim39-201ENSMUST00000042717 Tcl1b5P56845 121 aa5.66□□□□□ -1.5
Trim39-201ENSMUST00000042717 Ifitm6A0A1B0GS75 124 aa5.65□□□□□ -1.5
Trim39-201ENSMUST00000042717 Klk12B2RVZ0 247 aa5.65□□□□□ -1.5
Trim39-201ENSMUST00000042717 Gm5153P01627 120 aa5.65□□□□□ -1.5
Trim39-201ENSMUST00000042717 Gm10845Q3UNY9 185 aa5.65□□□□□ -1.51
Trim39-201ENSMUST00000042717 Gm10549Q3URY4 149 aa5.65□□□□□ -1.51
Trim39-201ENSMUST00000042717 Fam19a5Q91WE9 132 aa5.65□□□□□ -1.51
Trim39-201ENSMUST00000042717 1700012A03RikQ9DAF1 130 aa5.65□□□□□ -1.51
Trim39-201ENSMUST00000042717 OxtP35454 125 aa5.64□□□□□ -1.51
Trim39-201ENSMUST00000042717 Defa23Q5G866 93 aa5.64□□□□□ -1.51
Trim39-201ENSMUST00000042717 Gm9903Q8C9Y8 129 aa5.64□□□□□ -1.51
Trim39-201ENSMUST00000042717 CnbpP53996 178 aaKnown RBP5.64□□□□□ -1.51
Trim39-201ENSMUST00000042717 Dnah9B1AR51 4484 aa5.64□□□□□ -1.51
Trim39-201ENSMUST00000042717 Cox7bP56393 80 aa5.63□□□□□ -1.51
Trim39-201ENSMUST00000042717 SycnQ8VCK7 134 aa5.63□□□□□ -1.51
Trim39-201ENSMUST00000042717 Cox6cQ9CPQ1 76 aa5.63□□□□□ -1.51
Trim39-201ENSMUST00000042717 CenpwQ3URR0 86 aa5.63□□□□□ -1.51
Trim39-201ENSMUST00000042717 Sprr1aQ62266 144 aa5.63□□□□□ -1.51
Trim39-201ENSMUST00000042717 ScxQ64124 207 aa5.63□□□□□ -1.51
Trim39-201ENSMUST00000042717 AY074887Q8R5F9 132 aa5.63□□□□□ -1.51
Trim39-201ENSMUST00000042717 Gm5142Q8C5X9 133 aa5.63□□□□□ -1.51
Trim39-201ENSMUST00000042717 Gm9805F6YK59 57 aa5.62□□□□□ -1.51
Trim39-201ENSMUST00000042717 Smim29Q8R043 75 aa5.62□□□□□ -1.51
Trim39-201ENSMUST00000042717 Tcl1b3P56842 122 aa5.62□□□□□ -1.51
Trim39-201ENSMUST00000042717 Dnah7aE9Q0T8 4024 aa5.62□□□□□ -1.51
Trim39-201ENSMUST00000042717 Igkv4-58A0A0G2JGI6 119 aa5.61□□□□□ -1.51
Trim39-201ENSMUST00000042717 Defa27F2Z403 93 aa5.61□□□□□ -1.51
Trim39-201ENSMUST00000042717 Gm10767Q3TQP0 103 aa5.61□□□□□ -1.51
Trim39-201ENSMUST00000042717 Gm11627A6PWP4 55 aa5.61□□□□□ -1.51
Trim39-201ENSMUST00000042717 Rpl28P41105 137 aaKnown RBP5.61□□□□□ -1.51
Trim39-201ENSMUST00000042717 Pou2af1Q64693 256 aa5.61□□□□□ -1.51
Trim39-201ENSMUST00000042717 Gm16381A0A1Y7VKT9 73 aa5.6□□□□□ -1.51
Trim39-201ENSMUST00000042717 Obox2E9PXV9 151 aa5.6□□□□□ -1.51
Trim39-201ENSMUST00000042717 Bean1Q9EQG5 255 aa5.6□□□□□ -1.51
Trim39-201ENSMUST00000042717 Smim26Q3V460 107 aa5.59□□□□□ -1.51
Trim39-201ENSMUST00000042717 Rpl39lQ9CQD0 51 aa5.59□□□□□ -1.51
Trim39-201ENSMUST00000042717 Wfdc6bF6ULY1 148 aa5.59□□□□□ -1.52
Trim39-201ENSMUST00000042717 Cd164Q9R0L9 197 aa5.59□□□□□ -1.52
Trim39-201ENSMUST00000042717 Hist1h4aP62806 103 aaKnown RBP5.58□□□□□ -1.52
Trim39-201ENSMUST00000042717 Defa25Q5G864 92 aa5.58□□□□□ -1.52
Trim39-201ENSMUST00000042717 Igkv2-109A0A075B5K6 120 aa5.57□□□□□ -1.52
Trim39-201ENSMUST00000042717 2310034G01RikA0A286YDL3 209 aa5.57□□□□□ -1.52
Trim39-201ENSMUST00000042717 BC048502Q80Y74 154 aa5.57□□□□□ -1.52
Trim39-201ENSMUST00000042717 Gm19935A0A1B0GSF9 52 aa5.56□□□□□ -1.52
Trim39-201ENSMUST00000042717 P01819 144 aa5.56□□□□□ -1.52
Trim39-201ENSMUST00000042717 Tmem258P61166 79 aa5.56□□□□□ -1.52
Trim39-201ENSMUST00000042717 1600014C23RikQ9DAX4 101 aa5.56□□□□□ -1.52
Trim39-201ENSMUST00000042717 Gm10320E9PW43 113 aa5.56□□□□□ -1.52
Trim39-201ENSMUST00000042717 Igkv1-122A0A140T8M9 119 aa5.56□□□□□ -1.52
Trim39-201ENSMUST00000042717 P84750 121 aa5.56□□□□□ -1.52
Trim39-201ENSMUST00000042717 HrnrQ8VHD8 2496 aa5.55□□□□□ -1.52
Trim39-201ENSMUST00000042717 Krtap10-10A0A1W2P7T6 217 aa5.55□□□□□ -1.52
Trim39-201ENSMUST00000042717 4930524J08RikQ9CUJ5 163 aa5.55□□□□□ -1.52
Trim39-201ENSMUST00000042717 Q9DAA7 145 aa5.55□□□□□ -1.52
Trim39-201ENSMUST00000042717 Ube2bP63147 152 aa5.54□□□□□ -1.52
Trim39-201ENSMUST00000042717 Phf5aP83870 110 aaKnown RBP5.54□□□□□ -1.52
Trim39-201ENSMUST00000042717 Defb37Q7TMD2 62 aa5.54□□□□□ -1.52
Trim39-201ENSMUST00000042717 Gm2696A0A1W2P709 240 aa5.54□□□□□ -1.52
Trim39-201ENSMUST00000042717 Gm11011D3Z3L9 86 aa5.54□□□□□ -1.52
Trim39-201ENSMUST00000042717 Gm7102J3QQ10 178 aa5.54□□□□□ -1.52
Trim39-201ENSMUST00000042717 Defa7P50705 93 aa5.54□□□□□ -1.52
Trim39-201ENSMUST00000042717 Msrb1Q9JLC3 116 aa5.53□□□□□ -1.52
Trim39-201ENSMUST00000042717 Trav14d-3-dv8A0A075B619 120 aa5.53□□□□□ -1.52
Trim39-201ENSMUST00000042717 Prol1E9PYQ4 312 aa5.52□□□□□ -1.53
Trim39-201ENSMUST00000042717 Igf1P05017 153 aa5.52□□□□□ -1.53
Trim39-201ENSMUST00000042717 Dmac1Q9CQ00 111 aa5.52□□□□□ -1.53
Trim39-201ENSMUST00000042717 Dnah7cA0A087WR13 4024 aa5.52□□□□□ -1.53
Trim39-201ENSMUST00000042717 Dnah5Q8VHE6 4621 aa5.52□□□□□ -1.53
Trim39-201ENSMUST00000042717 Gm10770F7D043 238 aa5.52□□□□□ -1.53
Retrieved 100 of 22,080 RNA–protein pairs in 75.3 ms