RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Pla2g1bQ9Z0Y2 146 aa9.1□□□□□ -0.95
Prpf38b-201ENSMUST00000029480 Gm10570F6VB42 170 aa9.09□□□□□ -0.95
Prpf38b-201ENSMUST00000029480 Itpr2Q9Z329 2701 aa9.09□□□□□ -0.95
Prpf38b-201ENSMUST00000029480 Igkv1-35A0A0G2JDE5 120 aa9.09□□□□□ -0.95
Prpf38b-201ENSMUST00000029480 Gm10401E9Q3K6 71 aa9.09□□□□□ -0.95
Prpf38b-201ENSMUST00000029480 Defb29Q8BGW9 78 aa9.09□□□□□ -0.95
Prpf38b-201ENSMUST00000029480 B230359F08RikA0A0B4J1K3 109 aa9.08□□□□□ -0.96
Prpf38b-201ENSMUST00000029480 Bles03Q8VD62 251 aa9.08□□□□□ -0.96
Prpf38b-201ENSMUST00000029480 Trav13-1A0A075B644 110 aa9.08□□□□□ -0.96
Prpf38b-201ENSMUST00000029480 Ighv2-5A0A0A6YY69 116 aa9.07□□□□□ -0.96
Prpf38b-201ENSMUST00000029480 P01755 137 aa9.07□□□□□ -0.96
Prpf38b-201ENSMUST00000029480 Cdc42se1Q8BHL7 80 aa9.07□□□□□ -0.96
Prpf38b-201ENSMUST00000029480 Igkv1-117A0A140T8M0 119 aa9.06□□□□□ -0.96
Prpf38b-201ENSMUST00000029480 Ndufa12Q7TMF3 145 aaKnown RBP9.06□□□□□ -0.96
Prpf38b-201ENSMUST00000029480 Ube2bP63147 152 aa9.06□□□□□ -0.96
Prpf38b-201ENSMUST00000029480 Phf5aP83870 110 aaKnown RBP9.06□□□□□ -0.96
Prpf38b-201ENSMUST00000029480 Tomm7Q9D173 55 aa9.05□□□□□ -0.96
Prpf38b-201ENSMUST00000029480 Tex15F8VPN2 2785 aa9.05□□□□□ -0.96
Prpf38b-201ENSMUST00000029480 Trav9n-4A0A075B631 113 aa9.05□□□□□ -0.96
Prpf38b-201ENSMUST00000029480 Igkv8-18A0A0B4J1J3 123 aa9.04□□□□□ -0.96
Prpf38b-201ENSMUST00000029480 Igkv3-9A0A140T8P4 119 aa9.04□□□□□ -0.96
Prpf38b-201ENSMUST00000029480 AW011738F6S7Q2 159 aa9.04□□□□□ -0.96
Prpf38b-201ENSMUST00000029480 Hivep1Q03172 2688 aa9.04□□□□□ -0.96
Prpf38b-201ENSMUST00000029480 Prh1P05142 261 aa9.03□□□□□ -0.96
Prpf38b-201ENSMUST00000029480 Pde6gP09174 87 aa9.03□□□□□ -0.96
Prpf38b-201ENSMUST00000029480 Wfdc6bF6ULY1 148 aa9.03□□□□□ -0.96
Prpf38b-201ENSMUST00000029480 Gm10308Q9CVR5 141 aa9.02□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 Ighv10-3A0A075B5T6 119 aa9.01□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 Gm10770F7D043 238 aa9.01□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 Phxr5P08399 672 aa9.01□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 Ighv10-1A0A0B4J1J6 119 aa9.01□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 Igkv4-92A0A0B4J1I2 117 aa9□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 Gm17521F6QAC8 156 aa9□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 E130208F15RikQ3UPV3 143 aa9□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 A830005F24RikQ8BRT5 167 aa9□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 Nbeal2Q6ZQA0 2742 aa9□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 Stab1Q8R4Y4 2571 aa8.99□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 Trbv13-2A0A140T8N6 113 aa8.99□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 Tenm1Q9WTS4 2731 aa8.98□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 Nsd1O88491 2588 aaKnown RBP8.98□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 1810062G17RikG3X8Y2 129 aa8.98□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 Igkv1-99F6XWB2 120 aa8.98□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 PrcdQ00LT2 53 aa8.98□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 Fam19a3Q7TPG6 132 aa8.98□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 Gm17509Q9CZ61 145 aa8.97□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 Gm10845Q3UNY9 185 aa8.97□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 Igkv3-3A0A140T8Q0 119 aa8.97□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 Gm5142Q8C5X9 133 aa8.97□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 Ighv2-2A0A075B5P8 116 aa8.96□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 Igkv3-12A0A140T8P0 119 aa8.96□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 Igkv8-21A0A140T8P7 120 aa8.96□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 P01821 116 aa8.96□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 Gm7276Q3TYW4 209 aa8.96□□□□□ -0.97
Prpf38b-201ENSMUST00000029480 Notch2O35516 2470 aa8.95□□□□□ -0.98
Prpf38b-201ENSMUST00000029480 2310034G01RikA0A286YDL3 209 aa8.94□□□□□ -0.98
Prpf38b-201ENSMUST00000029480 Gm36176A0A1W2P8D5 158 aa8.93□□□□□ -0.98
Prpf38b-201ENSMUST00000029480 Igkv1-110A0A0B4J1I0 119 aa8.93□□□□□ -0.98
Prpf38b-201ENSMUST00000029480 Ubl5Q9EPV8 73 aa8.93□□□□□ -0.98
Prpf38b-201ENSMUST00000029480 D730001G18RikA0A087WQU7 115 aa8.92□□□□□ -0.98
Prpf38b-201ENSMUST00000029480 Leap2Q91V13 76 aa8.9□□□□□ -0.98
Prpf38b-201ENSMUST00000029480 Gm16181B0V2H2 73 aa8.89□□□□□ -0.99
Prpf38b-201ENSMUST00000029480 2310034C09RikQ9D746 214 aa8.89□□□□□ -0.99
Prpf38b-201ENSMUST00000029480 Gm3646F6S692 53 aa8.89□□□□□ -0.99
Prpf38b-201ENSMUST00000029480 Ube2aQ9Z255 152 aa8.89□□□□□ -0.99
Prpf38b-201ENSMUST00000029480 P06320 134 aa8.88□□□□□ -0.99
Prpf38b-201ENSMUST00000029480 AY074887Q8R5F9 132 aa8.88□□□□□ -0.99
Prpf38b-201ENSMUST00000029480 Ormdl1Q921I0 153 aa8.88□□□□□ -0.99
Prpf38b-201ENSMUST00000029480 Atox1O08997 68 aaKnown RBP8.88□□□□□ -0.99
Prpf38b-201ENSMUST00000029480 Gm9821Q8K076 103 aa8.88□□□□□ -0.99
Prpf38b-201ENSMUST00000029480 Rpl39lQ9CQD0 51 aa8.88□□□□□ -0.99
Prpf38b-201ENSMUST00000029480 Col6a5A6H584 2640 aa8.87□□□□□ -0.99
Prpf38b-201ENSMUST00000029480 Igkv2-109A0A075B5K6 120 aa8.87□□□□□ -0.99
Prpf38b-201ENSMUST00000029480 Igkv8-26A0A075B5N5 123 aa8.86□□□□□ -0.99
Prpf38b-201ENSMUST00000029480 Klk12B2RVZ0 247 aa8.86□□□□□ -0.99
Prpf38b-201ENSMUST00000029480 Q9DAA7 145 aa8.86□□□□□ -0.99
Prpf38b-201ENSMUST00000029480 PolqQ8CGS6 2544 aa8.85□□□□□ -0.99
Prpf38b-201ENSMUST00000029480 Q8BT88 171 aa8.85□□□□□ -0.99
Prpf38b-201ENSMUST00000029480 Cox7b2Q9D2H1 82 aa8.85□□□□□ -0.99
Prpf38b-201ENSMUST00000029480 Igkv3-7A0A0G2JE31 119 aa8.85□□□□□ -0.99
Prpf38b-201ENSMUST00000029480 Wfdc12Q9JHY3 85 aa8.85□□□□□ -0.99
Prpf38b-201ENSMUST00000029480 Gm17577J3QNF7 156 aa8.84□□□□□ -0.99
Prpf38b-201ENSMUST00000029480 Elof1P60003 83 aa8.84□□□□□ -0.99
Prpf38b-201ENSMUST00000029480 Gm7138L7N2C3 230 aa8.83□□□□□ -1
Prpf38b-201ENSMUST00000029480 Gm3238W4VSP7 230 aa8.83□□□□□ -1
Prpf38b-201ENSMUST00000029480 Notch1Q01705 2531 aa8.82□□□□□ -1
Prpf38b-201ENSMUST00000029480 Gm9805F6YK59 57 aa8.82□□□□□ -1
Prpf38b-201ENSMUST00000029480 6430550D23RikE9Q1X6 194 aa8.81□□□□□ -1
Prpf38b-201ENSMUST00000029480 TnxbO35452 4006 aa8.81□□□□□ -1
Prpf38b-201ENSMUST00000029480 Srrm2Q8BTI8 2703 aaKnown RBP8.81□□□□□ -1
Prpf38b-201ENSMUST00000029480 Gm10320E9PW43 113 aa8.81□□□□□ -1
Prpf38b-201ENSMUST00000029480 Krtap11-1E9Q2E9 183 aa8.8□□□□□ -1
Prpf38b-201ENSMUST00000029480 Gm10518F6UQQ9 182 aa8.8□□□□□ -1
Prpf38b-201ENSMUST00000029480 Igkv8-16A0A0G2JDG9 121 aa8.79□□□□□ -1
Prpf38b-201ENSMUST00000029480 Igkv4-58A0A0G2JGI6 119 aa8.79□□□□□ -1
Prpf38b-201ENSMUST00000029480 Gm12216A0A1W2P827 62 aa8.79□□□□□ -1
Prpf38b-201ENSMUST00000029480 Snhg11Q4G0K9 87 aa8.79□□□□□ -1
Prpf38b-201ENSMUST00000029480 Igkv3-1A0A075B5P1 119 aa8.78□□□□□ -1
Prpf38b-201ENSMUST00000029480 Gm11627A6PWP4 55 aa8.78□□□□□ -1
Prpf38b-201ENSMUST00000029480 Sprr4Q8CGN8 76 aa8.78□□□□□ -1
Prpf38b-201ENSMUST00000029480 Cypt14J3QPF7 87 aa8.77□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 7.4 ms