RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Gm35339A0A140LHH9 1649 aa26.8■■□□□ 1.88
Prpf38b-201ENSMUST00000029480 NischQ80TM9 1593 aa26.43■■□□□ 1.82
Prpf38b-201ENSMUST00000029480 Abcc9P70170 1546 aa25.9■■□□□ 1.74
Prpf38b-201ENSMUST00000029480 Abcc8B2RUS7 1588 aa25.42■■□□□ 1.66
Prpf38b-201ENSMUST00000029480 Rtl1Q7M732 1744 aa24.88■■□□□ 1.57
Prpf38b-201ENSMUST00000029480 Dcaf1Q80TR8 1506 aa24.16■■□□□ 1.46
Prpf38b-201ENSMUST00000029480 ScribQ80U72 1612 aa24.13■■□□□ 1.45
Prpf38b-201ENSMUST00000029480 Ccdc180J3QNE4 1664 aa24■■□□□ 1.43
Prpf38b-201ENSMUST00000029480 Kdm5dQ62240 1548 aa23.46■■□□□ 1.35
Prpf38b-201ENSMUST00000029480 NacadQ5SWP3 1504 aa23.45■■□□□ 1.34
Prpf38b-201ENSMUST00000029480 Zcchc6Q5BLK4 1491 aaKnown RBP23.29■■□□□ 1.32
Prpf38b-201ENSMUST00000029480 Rhox8Q6VSS7 320 aa23.14■■□□□ 1.3
Prpf38b-201ENSMUST00000029480 Crybg2B7ZCC2 1516 aa23.11■■□□□ 1.29
Prpf38b-201ENSMUST00000029480 Rb1cc1Q9ESK9 1588 aa23.09■■□□□ 1.29
Prpf38b-201ENSMUST00000029480 Baz1aO88379 1555 aa23.04■■□□□ 1.28
Prpf38b-201ENSMUST00000029480 Sycp2Q9CUU3 1500 aa22.97■■□□□ 1.27
Prpf38b-201ENSMUST00000029480 Smarca2Q6DIC0 1577 aa22.56■■□□□ 1.2
Prpf38b-201ENSMUST00000029480 BicraF8VPZ9 1578 aa22.53■■□□□ 1.2
Prpf38b-201ENSMUST00000029480 HrcG5E8J6 738 aa22.41■■□□□ 1.18
Prpf38b-201ENSMUST00000029480 Rpgrip1Q9EPQ2 1331 aa22.29■■□□□ 1.16
Prpf38b-201ENSMUST00000029480 Cecr2E9Q2Z1 1453 aa21.82■■□□□ 1.08
Prpf38b-201ENSMUST00000029480 Cep164Q5DU05 1446 aa21.8■■□□□ 1.08
Prpf38b-201ENSMUST00000029480 Brd4Q9ESU6 1400 aaKnown RBP21.8■■□□□ 1.08
Prpf38b-201ENSMUST00000029480 Smarca4Q3TKT4 1613 aaKnown RBP21.77■■□□□ 1.08
Prpf38b-201ENSMUST00000029480 Pds5bQ4VA53 1446 aaKnown RBP21.74■■□□□ 1.07
Prpf38b-201ENSMUST00000029480 Trim41Q5NCC3 630 aa21.7■■□□□ 1.06
Prpf38b-201ENSMUST00000029480 Atad2bE9Q166 1460 aaKnown RBP21.68■■□□□ 1.06
Prpf38b-201ENSMUST00000029480 Cttnbp2B9EJA2 1648 aa21.63■■□□□ 1.05
Prpf38b-201ENSMUST00000029480 Top2bQ64511 1612 aa21.59■■□□□ 1.05
Prpf38b-201ENSMUST00000029480 Ccdc136Q3TVA9 1136 aa21.55■■□□□ 1.04
Prpf38b-201ENSMUST00000029480 Iqgap2Q3UQ44 1575 aa21.54■■□□□ 1.04
Prpf38b-201ENSMUST00000029480 Synj1Q8CHC4 1574 aa21.51■■□□□ 1.03
Prpf38b-201ENSMUST00000029480 CftrP26361 1476 aa21.5■■□□□ 1.03
Prpf38b-201ENSMUST00000029480 Golga3P55937 1487 aa21.47■■□□□ 1.03
Prpf38b-201ENSMUST00000029480 Acin1Q9JIX8 1338 aaKnown RBP21.43■■□□□ 1.02
Prpf38b-201ENSMUST00000029480 Thoc2B1AZI6 1594 aaKnown RBP21.39■■□□□ 1.01
Prpf38b-201ENSMUST00000029480 Pcgf6Q99NA9 353 aa21.38■■□□□ 1.01
Prpf38b-201ENSMUST00000029480 DiexfQ8BTT6 772 aaKnown RBP21.36■■□□□ 1.01
Prpf38b-201ENSMUST00000029480 Ehmt2Q9Z148 1263 aaKnown RBP21.3■■□□□ 1
Prpf38b-201ENSMUST00000029480 Wdr62Q3U3T8 1523 aa21.29■■□□□ 1
Prpf38b-201ENSMUST00000029480 Ercc6F8VPZ5 1481 aa21.27■■□□□ 1
Prpf38b-201ENSMUST00000029480 Frmpd1A2AKB4 1549 aa21.21■□□□□ 0.99
Prpf38b-201ENSMUST00000029480 Myt1Q8CFC2 1127 aa21.14■□□□□ 0.98
Prpf38b-201ENSMUST00000029480 Rsf1E9PWW9 1441 aaKnown RBP21.1■□□□□ 0.97
Prpf38b-201ENSMUST00000029480 Fmn1Q05860 1466 aa21.08■□□□□ 0.97
Prpf38b-201ENSMUST00000029480 TnnQ80Z71 1560 aa21.05■□□□□ 0.96
Prpf38b-201ENSMUST00000029480 Fam135aQ6NS59 1506 aa21.04■□□□□ 0.96
Prpf38b-201ENSMUST00000029480 Top2aQ01320 1528 aaKnown RBP21.02■□□□□ 0.95
Prpf38b-201ENSMUST00000029480 Unc13aQ4KUS2 1712 aa21■□□□□ 0.95
Prpf38b-201ENSMUST00000029480 Cc2d2aQ8CFW7 1633 aa20.98■□□□□ 0.95
Prpf38b-201ENSMUST00000029480 Baz1bQ9Z277 1479 aa20.93■□□□□ 0.94
Prpf38b-201ENSMUST00000029480 Phldb1Q6PDH0 1371 aaKnown RBP20.92■□□□□ 0.94
Prpf38b-201ENSMUST00000029480 Ccdc88bQ4QRL3 1481 aa20.91■□□□□ 0.94
Prpf38b-201ENSMUST00000029480 Esf1Q3V1V3 845 aaKnown RBP20.9■□□□□ 0.94
Prpf38b-201ENSMUST00000029480 Rapgef2Q8CHG7 1496 aa20.89■□□□□ 0.93
Prpf38b-201ENSMUST00000029480 Eif4g1Q6NZJ6 1600 aaKnown RBP20.88■□□□□ 0.93
Prpf38b-201ENSMUST00000029480 CenpbP27790 599 aa20.84■□□□□ 0.93
Prpf38b-201ENSMUST00000029480 Lamc3Q9R0B6 1581 aa20.79■□□□□ 0.92
Prpf38b-201ENSMUST00000029480 Dnajc5bQ9CQ94 199 aa20.73■□□□□ 0.91
Prpf38b-201ENSMUST00000029480 Cngb1E1AZ71 1325 aa20.73■□□□□ 0.91
Prpf38b-201ENSMUST00000029480 Bcl11aQ9QYE3 773 aa20.7■□□□□ 0.9
Prpf38b-201ENSMUST00000029480 Las1lA2BE28 776 aaKnown RBP20.58■□□□□ 0.89
Prpf38b-201ENSMUST00000029480 Chic1Q8CBW7 227 aa20.57■□□□□ 0.88
Prpf38b-201ENSMUST00000029480 Kif15Q6P9L6 1387 aa20.56■□□□□ 0.88
Prpf38b-201ENSMUST00000029480 Ubl4bQ9CQ84 188 aa20.55■□□□□ 0.88
Prpf38b-201ENSMUST00000029480 Amer1Q7TS75 1132 aa20.54■□□□□ 0.88
Prpf38b-201ENSMUST00000029480 Map3k1P53349 1493 aa20.52■□□□□ 0.88
Prpf38b-201ENSMUST00000029480 NrkQ9R0G8 1455 aa20.51■□□□□ 0.87
Prpf38b-201ENSMUST00000029480 Ccdc18Q640L5 1455 aa20.49■□□□□ 0.87
Prpf38b-201ENSMUST00000029480 Cep162Q6ZQ06 1403 aa20.46■□□□□ 0.87
Prpf38b-201ENSMUST00000029480 Mrc2Q64449 1479 aa20.46■□□□□ 0.87
Prpf38b-201ENSMUST00000029480 Camsap1A2AHC3 1581 aa20.44■□□□□ 0.86
Prpf38b-201ENSMUST00000029480 Cux2P70298 1426 aa20.44■□□□□ 0.86
Prpf38b-201ENSMUST00000029480 NefmP08553 848 aa20.42■□□□□ 0.86
Prpf38b-201ENSMUST00000029480 AqrQ8CFQ3 1481 aaKnown RBP20.36■□□□□ 0.85
Prpf38b-201ENSMUST00000029480 Erich3F6QRE9 1637 aa20.34■□□□□ 0.85
Prpf38b-201ENSMUST00000029480 Shroom4Q1W617 1475 aa20.28■□□□□ 0.84
Prpf38b-201ENSMUST00000029480 PrkcshO08795 521 aa20.24■□□□□ 0.83
Prpf38b-201ENSMUST00000029480 TchhA0A0B4J1F9 1599 aa20.22■□□□□ 0.83
Prpf38b-201ENSMUST00000029480 Supt5hO55201 1082 aaKnown RBP20.21■□□□□ 0.83
Prpf38b-201ENSMUST00000029480 Grin2bQ01097 1482 aa20.21■□□□□ 0.83
Prpf38b-201ENSMUST00000029480 Gpatch8A2A6A1 1505 aa20.21■□□□□ 0.83
Prpf38b-201ENSMUST00000029480 Gab3Q8BSM5 595 aa20.21■□□□□ 0.83
Prpf38b-201ENSMUST00000029480 Kif21aQ9QXL2 1672 aa20.2■□□□□ 0.82
Prpf38b-201ENSMUST00000029480 Arhgap35Q91YM2 1499 aa20.2■□□□□ 0.82
Prpf38b-201ENSMUST00000029480 1700123L14RikQ3V2K7 440 aa20.19■□□□□ 0.82
Prpf38b-201ENSMUST00000029480 Neurod1Q60867 357 aa20.18■□□□□ 0.82
Prpf38b-201ENSMUST00000029480 Peg3Q3URU2 1571 aa20.18■□□□□ 0.82
Prpf38b-201ENSMUST00000029480 Npm1Q61937 292 aaKnown RBP20.16■□□□□ 0.82
Prpf38b-201ENSMUST00000029480 LrpprcQ6PB66 1392 aaKnown RBP20.15■□□□□ 0.82
Prpf38b-201ENSMUST00000029480 PogzQ8BZH4 1409 aaKnown RBP20.13■□□□□ 0.81
Prpf38b-201ENSMUST00000029480 Arhgef5E9Q7D5 1581 aa20.08■□□□□ 0.81
Prpf38b-201ENSMUST00000029480 Dhx29Q6PGC1 1365 aaKnown RBP20.06■□□□□ 0.8
Prpf38b-201ENSMUST00000029480 Efcab5A0JP43 1406 aa20.04■□□□□ 0.8
Prpf38b-201ENSMUST00000029480 Mroh2bQ7M6Y6 1581 aa20.04■□□□□ 0.8
Prpf38b-201ENSMUST00000029480 Crocc2F6XLV1 1638 aa20.03■□□□□ 0.8
Prpf38b-201ENSMUST00000029480 Ncapd3Q6ZQK0 1506 aa20.03■□□□□ 0.8
Prpf38b-201ENSMUST00000029480 Il27Q8K3I6 234 aa20.03■□□□□ 0.8
Prpf38b-201ENSMUST00000029480 Duox2A2AQ99 1517 aa20.02■□□□□ 0.8
Prpf38b-201ENSMUST00000029480 PtprkP35822 1457 aa20.01■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms