RNA–Protein interactions for RNA: ENSMUST00000028224.14

Gapvd1-201, Transcript of GTPase-activating protein and VPS9 domain-containing protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Gapvd1, Length 5,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gapvd1-201ENSMUST00000028224 Gm10308Q9CVR5 141 aa12.34□□□□□ -0.43
Gapvd1-201ENSMUST00000028224 4930507D05RikQ8C9C9 103 aa12.33□□□□□ -0.44
Gapvd1-201ENSMUST00000028224 Gm5617Q91VN2 117 aa12.33□□□□□ -0.44
Gapvd1-201ENSMUST00000028224 Hcfc1Q61191 2045 aaKnown RBP12.33□□□□□ -0.44
Gapvd1-201ENSMUST00000028224 Gm17689B3GLJ4 109 aa12.32□□□□□ -0.44
Gapvd1-201ENSMUST00000028224 Epg5Q80TA9 2572 aa12.31□□□□□ -0.44
Gapvd1-201ENSMUST00000028224 RetnlbQ99P86 105 aa12.31□□□□□ -0.44
Gapvd1-201ENSMUST00000028224 Fam168bQ80XQ8 194 aa12.31□□□□□ -0.44
Gapvd1-201ENSMUST00000028224 Gm20661K7N787 53 aa12.3□□□□□ -0.44
Gapvd1-201ENSMUST00000028224 Krtap11-1E9Q2E9 183 aa12.28□□□□□ -0.44
Gapvd1-201ENSMUST00000028224 Defb1P56386 69 aa12.27□□□□□ -0.45
Gapvd1-201ENSMUST00000028224 Q8BGJ3 129 aa12.25□□□□□ -0.45
Gapvd1-201ENSMUST00000028224 AplnQ9R0R4 77 aa12.24□□□□□ -0.45
Gapvd1-201ENSMUST00000028224 7530416G11RikJ3QJX6 159 aa12.24□□□□□ -0.45
Gapvd1-201ENSMUST00000028224 Sprr4Q8CGN8 76 aa12.23□□□□□ -0.45
Gapvd1-201ENSMUST00000028224 Coa5Q99M07 74 aa12.19□□□□□ -0.46
Gapvd1-201ENSMUST00000028224 Eif4ebp3Q80VV3 101 aa12.19□□□□□ -0.46
Gapvd1-201ENSMUST00000028224 AY074887Q8R5F9 132 aa12.18□□□□□ -0.46
Gapvd1-201ENSMUST00000028224 Cep192E9Q4Y4 2514 aaKnown RBP12.16□□□□□ -0.46
Gapvd1-201ENSMUST00000028224 Prr13Q9CQJ5 137 aa12.15□□□□□ -0.46
Gapvd1-201ENSMUST00000028224 Abca12E9Q876 2595 aa12.13□□□□□ -0.47
Gapvd1-201ENSMUST00000028224 Cdc42se1Q8BHL7 80 aa12.13□□□□□ -0.47
Gapvd1-201ENSMUST00000028224 1810062G17RikG3X8Y2 129 aa12.13□□□□□ -0.47
Gapvd1-201ENSMUST00000028224 Unc79Q0KK59 2596 aa12.11□□□□□ -0.47
Gapvd1-201ENSMUST00000028224 Lypd5Q9D7Z7 256 aa12.11□□□□□ -0.47
Gapvd1-201ENSMUST00000028224 Sprr1bQ62267 153 aa12.08□□□□□ -0.48
Gapvd1-201ENSMUST00000028224 Mp68P56379 58 aa12.07□□□□□ -0.48
Gapvd1-201ENSMUST00000028224 Usp9yF8VPU6 2556 aa12.04□□□□□ -0.48
Gapvd1-201ENSMUST00000028224 C530025M09RikF6RGA8 229 aa12.02□□□□□ -0.48
Gapvd1-201ENSMUST00000028224 A330070K13RikQ8CA53 115 aa12.02□□□□□ -0.49
Gapvd1-201ENSMUST00000028224 AW011738F6S7Q2 159 aa12.02□□□□□ -0.49
Gapvd1-201ENSMUST00000028224 Gm7276Q3TYW4 209 aa12.01□□□□□ -0.49
Gapvd1-201ENSMUST00000028224 CicQ924A2 2510 aa12.01□□□□□ -0.49
Gapvd1-201ENSMUST00000028224 Phxr4P15974 95 aa12□□□□□ -0.49
Gapvd1-201ENSMUST00000028224 Myo18bE9PV66 2605 aa12□□□□□ -0.49
Gapvd1-201ENSMUST00000028224 Defb9Q8R2I6 67 aa11.99□□□□□ -0.49
Gapvd1-201ENSMUST00000028224 Phxr5P08399 672 aa11.98□□□□□ -0.49
Gapvd1-201ENSMUST00000028224 Cypt15B1AXS0 87 aa11.98□□□□□ -0.49
Gapvd1-201ENSMUST00000028224 Gm3233E9Q2H5 230 aa11.94□□□□□ -0.5
Gapvd1-201ENSMUST00000028224 Uqcr11Q9CPX8 56 aa11.92□□□□□ -0.5
Gapvd1-201ENSMUST00000028224 Anapc11Q9CPX9 84 aa11.91□□□□□ -0.5
Gapvd1-201ENSMUST00000028224 Nbeal1E9PYP2 2688 aa11.91□□□□□ -0.5
Gapvd1-201ENSMUST00000028224 Rnase13Q5GAM7 153 aa11.9□□□□□ -0.51
Gapvd1-201ENSMUST00000028224 Plac8Q9JI48 112 aa11.9□□□□□ -0.51
Gapvd1-201ENSMUST00000028224 Ankrd17Q99NH0 2603 aaKnown RBP11.89□□□□□ -0.51
Gapvd1-201ENSMUST00000028224 Gm11213A0A1B0GR83 88 aa11.86□□□□□ -0.51
Gapvd1-201ENSMUST00000028224 Zfp292Q9Z2U2 2698 aa11.83□□□□□ -0.52
Gapvd1-201ENSMUST00000028224 CnbpP53996 178 aaKnown RBP11.82□□□□□ -0.52
Gapvd1-201ENSMUST00000028224 Fam104aA2A6P4 185 aa11.81□□□□□ -0.52
Gapvd1-201ENSMUST00000028224 Chtf8P0CG14 533 aa11.8□□□□□ -0.52
Gapvd1-201ENSMUST00000028224 Ankrd11E9Q4F7 2643 aa11.78□□□□□ -0.52
Gapvd1-201ENSMUST00000028224 Gm26620Q9CY65 116 aa11.77□□□□□ -0.53
Gapvd1-201ENSMUST00000028224 OxtP35454 125 aa11.77□□□□□ -0.53
Gapvd1-201ENSMUST00000028224 Zcchc13Q9D548 170 aa11.76□□□□□ -0.53
Gapvd1-201ENSMUST00000028224 Fam229bQ8CF36 80 aa11.73□□□□□ -0.53
Gapvd1-201ENSMUST00000028224 Gm10643Q3URG9 111 aa11.73□□□□□ -0.53
Gapvd1-201ENSMUST00000028224 FasnP19096 2504 aaKnown RBP11.7□□□□□ -0.54
Gapvd1-201ENSMUST00000028224 2310034C09RikQ9D746 214 aa11.67□□□□□ -0.54
Gapvd1-201ENSMUST00000028224 FlnbQ80X90 2602 aaKnown RBP11.66□□□□□ -0.54
Gapvd1-201ENSMUST00000028224 Smim29Q8R043 75 aa11.66□□□□□ -0.54
Gapvd1-201ENSMUST00000028224 Gm7138L7N2C3 230 aa11.66□□□□□ -0.54
Gapvd1-201ENSMUST00000028224 Gm3238W4VSP7 230 aa11.66□□□□□ -0.54
Gapvd1-201ENSMUST00000028224 Gm21798J3QNU5 87 aa11.65□□□□□ -0.54
Gapvd1-201ENSMUST00000028224 Gm20538F6Z9R1 75 aa11.64□□□□□ -0.55
Gapvd1-201ENSMUST00000028224 Cypt14J3QPF7 87 aa11.63□□□□□ -0.55
Gapvd1-201ENSMUST00000028224 Lelp1Q9DAE3 120 aa11.62□□□□□ -0.55
Gapvd1-201ENSMUST00000028224 CenpfE9Q3P4 2997 aaKnown RBP11.61□□□□□ -0.55
Gapvd1-201ENSMUST00000028224 Usp24B1AY13 2617 aaKnown RBP11.6□□□□□ -0.55
Gapvd1-201ENSMUST00000028224 Nsd1O88491 2588 aaKnown RBP11.57□□□□□ -0.56
Gapvd1-201ENSMUST00000028224 NbdyA0A0N4SUI7 68 aa11.57□□□□□ -0.56
Gapvd1-201ENSMUST00000028224 AtrQ9JKK8 2635 aa11.57□□□□□ -0.56
Gapvd1-201ENSMUST00000028224 Golgb1E9PVZ8 3238 aa11.54□□□□□ -0.56
Gapvd1-201ENSMUST00000028224 Pla2g10Q9QXX3 151 aa11.53□□□□□ -0.56
Gapvd1-201ENSMUST00000028224 Gm7137J3QMW1 236 aa11.53□□□□□ -0.56
Gapvd1-201ENSMUST00000028224 Gm10065F6TJM2 114 aa11.51□□□□□ -0.57
Gapvd1-201ENSMUST00000028224 CriptO70333 101 aa11.51□□□□□ -0.57
Gapvd1-201ENSMUST00000028224 Gm10320E9PW43 113 aa11.49□□□□□ -0.57
Gapvd1-201ENSMUST00000028224 6030445D17RikE9Q8F9 148 aa11.49□□□□□ -0.57
Gapvd1-201ENSMUST00000028224 Gm9821Q8K076 103 aa11.49□□□□□ -0.57
Gapvd1-201ENSMUST00000028224 Fn1P11276 2477 aaKnown RBP11.48□□□□□ -0.57
Gapvd1-201ENSMUST00000028224 Gm11565A2A4M7 156 aa11.46□□□□□ -0.57
Gapvd1-201ENSMUST00000028224 Gcn1E9PVA8 2671 aaKnown RBP11.44□□□□□ -0.58
Gapvd1-201ENSMUST00000028224 FlnaQ8BTM8 2647 aaKnown RBP11.44□□□□□ -0.58
Gapvd1-201ENSMUST00000028224 Gm3880A0A1B0GSB3 72 aa11.43□□□□□ -0.58
Gapvd1-201ENSMUST00000028224 Gm9955Q8CEJ8 102 aa11.42□□□□□ -0.58
Gapvd1-201ENSMUST00000028224 Gm4491E0CX42 125 aa11.39□□□□□ -0.59
Gapvd1-201ENSMUST00000028224 Gm42715A0A087WP63 3095 aaKnown RBP11.38□□□□□ -0.59
Gapvd1-201ENSMUST00000028224 PcntP48725 2898 aa11.37□□□□□ -0.59
Gapvd1-201ENSMUST00000028224 Dmbt1Q60997 2085 aa11.35□□□□□ -0.59
Gapvd1-201ENSMUST00000028224 Spink7Q6IE32 76 aa11.34□□□□□ -0.59
Gapvd1-201ENSMUST00000028224 Gm10139O88245 57 aa11.32□□□□□ -0.6
Gapvd1-201ENSMUST00000028224 Odf3bQ5M8M2 238 aa11.31□□□□□ -0.6
Gapvd1-201ENSMUST00000028224 HrnrQ8VHD8 2496 aa11.31□□□□□ -0.6
Gapvd1-201ENSMUST00000028224 Notch1Q01705 2531 aa11.28□□□□□ -0.6
Gapvd1-201ENSMUST00000028224 Gm9195A0A140LHT4 2805 aa11.27□□□□□ -0.61
Gapvd1-201ENSMUST00000028224 Gm9508A0A1W2P7W0 230 aa11.25□□□□□ -0.61
Gapvd1-201ENSMUST00000028224 Sprr1aQ62266 144 aa11.24□□□□□ -0.61
Gapvd1-201ENSMUST00000028224 Cystm1Q8K353 104 aa11.24□□□□□ -0.61
Gapvd1-201ENSMUST00000028224 Dnah12Q3V0Q1 3086 aa11.22□□□□□ -0.61
Gapvd1-201ENSMUST00000028224 Ep400Q8CHI8 3072 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 122 ms