RNA–Protein interactions for RNA: ENSMUST00000028224.14

Gapvd1-201, Transcript of GTPase-activating protein and VPS9 domain-containing protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Gapvd1, Length 5,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gapvd1-201ENSMUST00000028224 Rhox8Q6VSS7 320 aa32.6■■■□□ 2.81
Gapvd1-201ENSMUST00000028224 Rpgrip1Q9EPQ2 1331 aa29.62■■■□□ 2.33
Gapvd1-201ENSMUST00000028224 Ehmt2Q9Z148 1263 aaKnown RBP29.35■■■□□ 2.29
Gapvd1-201ENSMUST00000028224 Ccdc136Q3TVA9 1136 aa28.84■■■□□ 2.21
Gapvd1-201ENSMUST00000028224 Esf1Q3V1V3 845 aaKnown RBP28.71■■■□□ 2.19
Gapvd1-201ENSMUST00000028224 Cngb1E1AZ71 1325 aa28.7■■■□□ 2.18
Gapvd1-201ENSMUST00000028224 Wdr66E9Q743 1299 aa28.62■■■□□ 2.17
Gapvd1-201ENSMUST00000028224 Las1lA2BE28 776 aaKnown RBP28.57■■■□□ 2.16
Gapvd1-201ENSMUST00000028224 Ube2uB1AUC4 352 aa28.42■■■□□ 2.14
Gapvd1-201ENSMUST00000028224 Gab3Q8BSM5 595 aa28.37■■■□□ 2.13
Gapvd1-201ENSMUST00000028224 Zeb1Q64318 1117 aa28.28■■■□□ 2.12
Gapvd1-201ENSMUST00000028224 Trim41Q5NCC3 630 aa28.18■■■□□ 2.1
Gapvd1-201ENSMUST00000028224 Npm2Q80W85 207 aa28.15■■■□□ 2.1
Gapvd1-201ENSMUST00000028224 Pelp1Q9DBD5 1123 aaKnown RBP28.06■■■□□ 2.08
Gapvd1-201ENSMUST00000028224 Myt1lP97500 1187 aa27.94■■■□□ 2.06
Gapvd1-201ENSMUST00000028224 NischQ80TM9 1593 aa27.75■■■□□ 2.03
Gapvd1-201ENSMUST00000028224 Acin1Q9JIX8 1338 aaKnown RBP27.38■■□□□ 1.97
Gapvd1-201ENSMUST00000028224 UbtfP25976 765 aaKnown RBP27.37■■□□□ 1.97
Gapvd1-201ENSMUST00000028224 NefmP08553 848 aa27.31■■□□□ 1.96
Gapvd1-201ENSMUST00000028224 CenpbP27790 599 aa27.23■■□□□ 1.95
Gapvd1-201ENSMUST00000028224 Stra8P70278 393 aa27.1■■□□□ 1.93
Gapvd1-201ENSMUST00000028224 Slc24a1Q91WD8 1130 aa27.08■■□□□ 1.93
Gapvd1-201ENSMUST00000028224 Amer1Q7TS75 1132 aa27.01■■□□□ 1.91
Gapvd1-201ENSMUST00000028224 Il27Q8K3I6 234 aa26.9■■□□□ 1.9
Gapvd1-201ENSMUST00000028224 HrcG5E8J6 738 aa26.77■■□□□ 1.88
Gapvd1-201ENSMUST00000028224 Ccdc180J3QNE4 1664 aa26.7■■□□□ 1.87
Gapvd1-201ENSMUST00000028224 Cdk11bP24788 784 aaKnown RBP26.64■■□□□ 1.86
Gapvd1-201ENSMUST00000028224 Fam50aQ9WV03 339 aaKnown RBP26.54■■□□□ 1.84
Gapvd1-201ENSMUST00000028224 Ap3b1Q9Z1T1 1105 aa26.53■■□□□ 1.84
Gapvd1-201ENSMUST00000028224 Neurod1Q60867 357 aa26.46■■□□□ 1.83
Gapvd1-201ENSMUST00000028224 NrdcQ8BHG1 1161 aa26.46■■□□□ 1.83
Gapvd1-201ENSMUST00000028224 Anp32bQ9EST5 272 aaKnown RBP26.42■■□□□ 1.82
Gapvd1-201ENSMUST00000028224 Pcgf6Q99NA9 353 aa26.41■■□□□ 1.82
Gapvd1-201ENSMUST00000028224 NclP09405 707 aaKnown RBP26.41■■□□□ 1.82
Gapvd1-201ENSMUST00000028224 Zcchc6Q5BLK4 1491 aaKnown RBP26.37■■□□□ 1.81
Gapvd1-201ENSMUST00000028224 Nop58Q6DFW4 536 aaKnown RBP26.32■■□□□ 1.8
Gapvd1-201ENSMUST00000028224 Tnnt3Q9QZ47 272 aa26.28■■□□□ 1.8
Gapvd1-201ENSMUST00000028224 Ttbk1Q6PCN3 1308 aa26.27■■□□□ 1.8
Gapvd1-201ENSMUST00000028224 Ppargc1bQ8VHJ7 1014 aa26.26■■□□□ 1.79
Gapvd1-201ENSMUST00000028224 Os9Q8K2C7 672 aa26.25■■□□□ 1.79
Gapvd1-201ENSMUST00000028224 Rtl1Q7M732 1744 aa26.23■■□□□ 1.79
Gapvd1-201ENSMUST00000028224 Eif5bQ05D44 1216 aaKnown RBP26.23■■□□□ 1.79
Gapvd1-201ENSMUST00000028224 NeflP08551 543 aa26.22■■□□□ 1.79
Gapvd1-201ENSMUST00000028224 4933416C03RikQ3V063 378 aa26.15■■□□□ 1.78
Gapvd1-201ENSMUST00000028224 Abcc9P70170 1546 aa26.11■■□□□ 1.77
Gapvd1-201ENSMUST00000028224 TonslQ6NZL6 1363 aa26.09■■□□□ 1.77
Gapvd1-201ENSMUST00000028224 4930567H17RikQ3V0K5 233 aa26■■□□□ 1.75
Gapvd1-201ENSMUST00000028224 Supt5hO55201 1082 aaKnown RBP26■■□□□ 1.75
Gapvd1-201ENSMUST00000028224 Gm35339A0A140LHH9 1649 aa25.93■■□□□ 1.74
Gapvd1-201ENSMUST00000028224 Myt1Q8CFC2 1127 aa25.91■■□□□ 1.74
Gapvd1-201ENSMUST00000028224 Mier1Q5UAK0 511 aa25.88■■□□□ 1.73
Gapvd1-201ENSMUST00000028224 Lmod2Q3UHZ5 550 aa25.74■■□□□ 1.71
Gapvd1-201ENSMUST00000028224 Zbtb7cQ8VCZ7 619 aa25.74■■□□□ 1.71
Gapvd1-201ENSMUST00000028224 Npm1Q61937 292 aaKnown RBP25.68■■□□□ 1.7
Gapvd1-201ENSMUST00000028224 Plekhg3Q4VAC9 1341 aa25.65■■□□□ 1.7
Gapvd1-201ENSMUST00000028224 Hnrnpul2Q00PI9 745 aaKnown RBP25.59■■□□□ 1.69
Gapvd1-201ENSMUST00000028224 Rtl5Q5DTT4 599 aa25.52■■□□□ 1.68
Gapvd1-201ENSMUST00000028224 ClspnQ80YR7 1315 aa25.49■■□□□ 1.67
Gapvd1-201ENSMUST00000028224 Gm13697A2AK42 830 aa25.44■■□□□ 1.66
Gapvd1-201ENSMUST00000028224 Zbtb4Q5F293 982 aa25.41■■□□□ 1.66
Gapvd1-201ENSMUST00000028224 Ifnlr1Q8CGK5 535 aa25.38■■□□□ 1.65
Gapvd1-201ENSMUST00000028224 Chic1Q8CBW7 227 aa25.37■■□□□ 1.65
Gapvd1-201ENSMUST00000028224 Erich6D3Z6S9 713 aa25.32■■□□□ 1.64
Gapvd1-201ENSMUST00000028224 Anp32aO35381 247 aa25.28■■□□□ 1.64
Gapvd1-201ENSMUST00000028224 Mapk8ip2Q9ERE9 830 aa25.28■■□□□ 1.64
Gapvd1-201ENSMUST00000028224 Nlrp6Q91WS2 869 aa25.28■■□□□ 1.64
Gapvd1-201ENSMUST00000028224 Atp1b4Q99ME6 356 aa25.25■■□□□ 1.63
Gapvd1-201ENSMUST00000028224 Eid3Q3V124 375 aa25.24■■□□□ 1.63
Gapvd1-201ENSMUST00000028224 Prdm10Q3UTQ7 1184 aa25.2■■□□□ 1.62
Gapvd1-201ENSMUST00000028224 DaxxO35613 739 aa25.17■■□□□ 1.62
Gapvd1-201ENSMUST00000028224 Polr3glQ8R0C0 218 aa25.14■■□□□ 1.61
Gapvd1-201ENSMUST00000028224 Clip1Q922J3 1391 aa25.11■■□□□ 1.61
Gapvd1-201ENSMUST00000028224 Fkbp15Q6P9Q6 1216 aaKnown RBP25.1■■□□□ 1.61
Gapvd1-201ENSMUST00000028224 Abcc8B2RUS7 1588 aa25.03■■□□□ 1.6
Gapvd1-201ENSMUST00000028224 Hdac5Q9Z2V6 1113 aa25.02■■□□□ 1.6
Gapvd1-201ENSMUST00000028224 Brd4Q9ESU6 1400 aaKnown RBP25.02■■□□□ 1.6
Gapvd1-201ENSMUST00000028224 Gm13695A2AK44 830 aa25.01■■□□□ 1.59
Gapvd1-201ENSMUST00000028224 Sall2Q9QX96 1004 aa24.99■■□□□ 1.59
Gapvd1-201ENSMUST00000028224 Gm38655A0A286YDK6 273 aa24.95■■□□□ 1.58
Gapvd1-201ENSMUST00000028224 ArxO35085 564 aa24.92■■□□□ 1.58
Gapvd1-201ENSMUST00000028224 Ccer2J3QPU5 274 aa24.91■■□□□ 1.58
Gapvd1-201ENSMUST00000028224 Csrnp3P59055 597 aa24.9■■□□□ 1.58
Gapvd1-201ENSMUST00000028224 Cep164Q5DU05 1446 aa24.89■■□□□ 1.57
Gapvd1-201ENSMUST00000028224 Anks4bQ8K3X6 423 aa24.8■■□□□ 1.56
Gapvd1-201ENSMUST00000028224 Dcaf1Q80TR8 1506 aa24.78■■□□□ 1.56
Gapvd1-201ENSMUST00000028224 Chic2Q9D9G3 165 aa24.75■■□□□ 1.55
Gapvd1-201ENSMUST00000028224 Plppr3Q7TPB0 716 aa24.73■■□□□ 1.55
Gapvd1-201ENSMUST00000028224 Ubl4bQ9CQ84 188 aa24.72■■□□□ 1.55
Gapvd1-201ENSMUST00000028224 Calr4Q3TQS0 420 aa24.71■■□□□ 1.55
Gapvd1-201ENSMUST00000028224 Rangap1P46061 589 aaKnown RBP24.7■■□□□ 1.54
Gapvd1-201ENSMUST00000028224 DiexfQ8BTT6 772 aaKnown RBP24.7■■□□□ 1.54
Gapvd1-201ENSMUST00000028224 Ppp4r2Q0VGB7 417 aa24.67■■□□□ 1.54
Gapvd1-201ENSMUST00000028224 Rad21Q61550 635 aaKnown RBP24.67■■□□□ 1.54
Gapvd1-201ENSMUST00000028224 Upf2A2AT37 1269 aaKnown RBP24.64■■□□□ 1.54
Gapvd1-201ENSMUST00000028224 Mrs2Q5NCE8 434 aa24.61■■□□□ 1.53
Gapvd1-201ENSMUST00000028224 BlmO88700 1416 aa24.59■■□□□ 1.53
Gapvd1-201ENSMUST00000028224 Aplp2Q06335 707 aa24.58■■□□□ 1.53
Gapvd1-201ENSMUST00000028224 Clstn2Q9ER65 966 aa24.52■■□□□ 1.52
Gapvd1-201ENSMUST00000028224 Rb1cc1Q9ESK9 1588 aa24.5■■□□□ 1.51
Gapvd1-201ENSMUST00000028224 Wdr43Q6ZQL4 677 aaKnown RBP24.47■■□□□ 1.51
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms