RNA–Protein interactions for RNA: ENSMUST00000065785.3

Trim50-201, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim50, Length 1,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-201ENSMUST00000065785 Gm2916Q9D9B9 127 aa10.74□□□□□ -0.69
Trim50-201ENSMUST00000065785 Gm28269A0A087WSG3 125 aa10.73□□□□□ -0.69
Trim50-201ENSMUST00000065785 Dppa2Q9CWH0 301 aa10.73□□□□□ -0.69
Trim50-201ENSMUST00000065785 Cdip1Q9DB75 208 aa10.73□□□□□ -0.69
Trim50-201ENSMUST00000065785 Pglyrp4Q0VB07 374 aa10.72□□□□□ -0.69
Trim50-201ENSMUST00000065785 Csdc2Q91YQ3 154 aa10.72□□□□□ -0.69
Trim50-201ENSMUST00000065785 Insl3O09107 122 aa10.71□□□□□ -0.69
Trim50-201ENSMUST00000065785 P01896 185 aa10.71□□□□□ -0.69
Trim50-201ENSMUST00000065785 4930556J24RikQ9D4U7 146 aa10.71□□□□□ -0.69
Trim50-201ENSMUST00000065785 Smim26Q3V460 107 aa10.7□□□□□ -0.7
Trim50-201ENSMUST00000065785 Pkd1l1Q8R526 2615 aa10.69□□□□□ -0.7
Trim50-201ENSMUST00000065785 Igkv8-18A0A0B4J1J3 123 aa10.69□□□□□ -0.7
Trim50-201ENSMUST00000065785 Gm16381A0A1Y7VKT9 73 aa10.69□□□□□ -0.7
Trim50-201ENSMUST00000065785 1700020N15RikL7MTX3 112 aa10.69□□□□□ -0.7
Trim50-201ENSMUST00000065785 B9d2Q3UK10 175 aa10.69□□□□□ -0.7
Trim50-201ENSMUST00000065785 Gm5617Q91VN2 117 aa10.69□□□□□ -0.7
Trim50-201ENSMUST00000065785 AplnQ9R0R4 77 aa10.69□□□□□ -0.7
Trim50-201ENSMUST00000065785 Trav13-1A0A075B644 110 aa10.68□□□□□ -0.7
Trim50-201ENSMUST00000065785 Acyp1P56376 99 aa10.68□□□□□ -0.7
Trim50-201ENSMUST00000065785 2310009B15RikA0A0A6YWI4 143 aa10.68□□□□□ -0.7
Trim50-201ENSMUST00000065785 Igkv8-24A0A140T8P5 121 aa10.68□□□□□ -0.7
Trim50-201ENSMUST00000065785 P01819 144 aa10.68□□□□□ -0.7
Trim50-201ENSMUST00000065785 Dnah14A0A140LIJ4 4489 aa10.67□□□□□ -0.7
Trim50-201ENSMUST00000065785 Gm10767Q3TQP0 103 aa10.67□□□□□ -0.7
Trim50-201ENSMUST00000065785 Muc6Q80T03 2850 aa10.66□□□□□ -0.7
Trim50-201ENSMUST00000065785 Gm5153P01627 120 aa10.66□□□□□ -0.7
Trim50-201ENSMUST00000065785 Reg3bP35230 175 aa10.66□□□□□ -0.7
Trim50-201ENSMUST00000065785 Dnal4Q9DCM4 105 aa10.66□□□□□ -0.7
Trim50-201ENSMUST00000065785 Xlr5cQ9JJR2 179 aa10.66□□□□□ -0.7
Trim50-201ENSMUST00000065785 BatfO35284 125 aa10.65□□□□□ -0.7
Trim50-201ENSMUST00000065785 Cox7bP56393 80 aa10.65□□□□□ -0.7
Trim50-201ENSMUST00000065785 Defb11Q8R2I7 77 aa10.65□□□□□ -0.7
Trim50-201ENSMUST00000065785 Tenm2Q9WTS5 2764 aa10.65□□□□□ -0.7
Trim50-201ENSMUST00000065785 4930524J08RikQ9CUJ5 163 aa10.65□□□□□ -0.71
Trim50-201ENSMUST00000065785 Trav13-2A0A075B649 110 aa10.64□□□□□ -0.71
Trim50-201ENSMUST00000065785 Dnah3Q8BW94 4083 aa10.64□□□□□ -0.71
Trim50-201ENSMUST00000065785 Trav3-4A0A075B654 114 aa10.63□□□□□ -0.71
Trim50-201ENSMUST00000065785 Defb29Q8BGW9 78 aa10.63□□□□□ -0.71
Trim50-201ENSMUST00000065785 Gm5142Q8C5X9 133 aa10.63□□□□□ -0.71
Trim50-201ENSMUST00000065785 Gm17509Q9CZ61 145 aa10.63□□□□□ -0.71
Trim50-201ENSMUST00000065785 TeppQ6IMH0 216 aa10.63□□□□□ -0.71
Trim50-201ENSMUST00000065785 Gm12057A0A087WR21 115 aa10.62□□□□□ -0.71
Trim50-201ENSMUST00000065785 Igkv4-92A0A0B4J1I2 117 aa10.62□□□□□ -0.71
Trim50-201ENSMUST00000065785 Igkv8-16A0A0G2JDG9 121 aa10.62□□□□□ -0.71
Trim50-201ENSMUST00000065785 Gm10518F6UQQ9 182 aa10.62□□□□□ -0.71
Trim50-201ENSMUST00000065785 MifP34884 115 aaKnown RBP10.62□□□□□ -0.71
Trim50-201ENSMUST00000065785 CnbpP53996 178 aaKnown RBP10.62□□□□□ -0.71
Trim50-201ENSMUST00000065785 Gm10845Q3UNY9 185 aa10.62□□□□□ -0.71
Trim50-201ENSMUST00000065785 Ighv13-2A0A0A6YWN3 119 aa10.61□□□□□ -0.71
Trim50-201ENSMUST00000065785 9430015G10RikA2ASP7 199 aa10.61□□□□□ -0.71
Trim50-201ENSMUST00000065785 Cox7b2Q9D2H1 82 aa10.61□□□□□ -0.71
Trim50-201ENSMUST00000065785 Gm4707V9GXN5 68 aa10.61□□□□□ -0.71
Trim50-201ENSMUST00000065785 Lyrm7Q9DA03 104 aa10.61□□□□□ -0.71
Trim50-201ENSMUST00000065785 Znf414Q9DCK4 299 aa10.61□□□□□ -0.71
Trim50-201ENSMUST00000065785 FasnP19096 2504 aaKnown RBP10.6□□□□□ -0.71
Trim50-201ENSMUST00000065785 5730596B20RikQ8BQ08 205 aa10.59□□□□□ -0.71
Trim50-201ENSMUST00000065785 Igkv1-35A0A0G2JDE5 120 aa10.58□□□□□ -0.72
Trim50-201ENSMUST00000065785 Ube2d4D3YUH6 135 aa10.58□□□□□ -0.72
Trim50-201ENSMUST00000065785 AW011738F6S7Q2 159 aa10.58□□□□□ -0.72
Trim50-201ENSMUST00000065785 Reg3dQ9QUS9 175 aa10.58□□□□□ -0.72
Trim50-201ENSMUST00000065785 Trav13n-2A0A0G2JF93 110 aa10.57□□□□□ -0.72
Trim50-201ENSMUST00000065785 Hbb-b2P02089 147 aa10.56□□□□□ -0.72
Trim50-201ENSMUST00000065785 Wfdc12Q9JHY3 85 aa10.56□□□□□ -0.72
Trim50-201ENSMUST00000065785 Defa2P28309 93 aa10.56□□□□□ -0.72
Trim50-201ENSMUST00000065785 Gm17349F7BGH6 99 aa10.55□□□□□ -0.72
Trim50-201ENSMUST00000065785 AY074887Q8R5F9 132 aa10.55□□□□□ -0.72
Trim50-201ENSMUST00000065785 Tmem213Q08EA8 116 aa10.54□□□□□ -0.72
Trim50-201ENSMUST00000065785 Sslp1Q3UN54 99 aa10.54□□□□□ -0.72
Trim50-201ENSMUST00000065785 Sprr4Q8CGN8 76 aa10.54□□□□□ -0.72
Trim50-201ENSMUST00000065785 Mrpl52Q9D0Y8 121 aa10.54□□□□□ -0.72
Trim50-201ENSMUST00000065785 A730009L09RikA0A1B0GS82 72 aa10.53□□□□□ -0.72
Trim50-201ENSMUST00000065785 Ufsp1Q9CZP0 217 aa10.53□□□□□ -0.72
Trim50-201ENSMUST00000065785 Xcl1P47993 114 aa10.52□□□□□ -0.73
Trim50-201ENSMUST00000065785 Rpl39lQ9CQD0 51 aa10.52□□□□□ -0.73
Trim50-201ENSMUST00000065785 Trav14-1A0A0G2JF94 121 aa10.51□□□□□ -0.73
Trim50-201ENSMUST00000065785 Gm10770F7D043 238 aa10.51□□□□□ -0.73
Trim50-201ENSMUST00000065785 Gm9805F6YK59 57 aa10.51□□□□□ -0.73
Trim50-201ENSMUST00000065785 Rpl18aP62717 176 aaKnown RBP10.5□□□□□ -0.73
Trim50-201ENSMUST00000065785 Camk2n2Q78WH7 79 aa10.5□□□□□ -0.73
Trim50-201ENSMUST00000065785 Dnah17Q69Z23 4481 aa10.49□□□□□ -0.73
Trim50-201ENSMUST00000065785 Ighv10-1A0A0B4J1J6 119 aa10.49□□□□□ -0.73
Trim50-201ENSMUST00000065785 Spata45Q9CVW4 97 aa10.49□□□□□ -0.73
Trim50-201ENSMUST00000065785 Gm16485Q8C4B7 115 aa10.48□□□□□ -0.73
Trim50-201ENSMUST00000065785 Csmd3Q80T79 3707 aa10.48□□□□□ -0.73
Trim50-201ENSMUST00000065785 Gm17577J3QNF7 156 aa10.47□□□□□ -0.73
Trim50-201ENSMUST00000065785 Trav14d-3-dv8A0A075B619 120 aa10.47□□□□□ -0.73
Trim50-201ENSMUST00000065785 Ifitm6A0A1B0GS75 124 aa10.46□□□□□ -0.74
Trim50-201ENSMUST00000065785 Klk12B2RVZ0 247 aa10.46□□□□□ -0.74
Trim50-201ENSMUST00000065785 BC048502Q80Y74 154 aa10.44□□□□□ -0.74
Trim50-201ENSMUST00000065785 Gm10320E9PW43 113 aa10.44□□□□□ -0.74
Trim50-201ENSMUST00000065785 A0A286YCN5 57 aa10.43□□□□□ -0.74
Trim50-201ENSMUST00000065785 Atp5eP56382 52 aa10.42□□□□□ -0.74
Trim50-201ENSMUST00000065785 Cdk2ap2Q9CPY4 127 aa10.42□□□□□ -0.74
Trim50-201ENSMUST00000065785 2310034G01RikA0A286YDL3 209 aa10.42□□□□□ -0.74
Trim50-201ENSMUST00000065785 Anapc13Q8R034 74 aa10.42□□□□□ -0.74
Trim50-201ENSMUST00000065785 PrkdcP97313 4128 aa10.41□□□□□ -0.74
Trim50-201ENSMUST00000065785 Igkv4-58A0A0G2JGI6 119 aa10.41□□□□□ -0.74
Trim50-201ENSMUST00000065785 Ighv10-3A0A075B5T6 119 aa10.4□□□□□ -0.74
Trim50-201ENSMUST00000065785 Sprr1aQ62266 144 aa10.4□□□□□ -0.74
Trim50-201ENSMUST00000065785 MrapQ9D159 127 aa10.4□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 50.1 ms